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The map label for this gene is ompA [C]

Identifier: 160873670

GI number: 160873670

Start: 634724

End: 635302

Strand: Direct

Name: ompA [C]

Synonym: Sbal195_0548

Alternate gene names: 160873670

Gene position: 634724-635302 (Clockwise)

Preceding gene: 160873669

Following gene: 160873675

Centisome position: 11.87

GC content: 39.38

Gene sequence:

>579_bases
ATGAAAAATACCATTCTTACTTTGGCCGCCATTATTTCTTTAGCCTCTGTTAGTGTTTACTCTCATGCGGAGAATATGAA
AAATAATGATGTCGCAGAAAATGGCATTTATGTTGGTGCTAACTATGGTTATTTAAAAGTTGATGGTAAAGATGACTTCG
ATGATAATAGCGATGTTATTCAAGGGCTTGTTGGTTATCGCTTCAACCAATATTTAGCTATCGAAGGCGGATACGTCAAC
TTCGGTGATTATGGCAATAGCCTTTCTAATGCAGAAACAGATGGTTATACCGCTGCGCTAAAAGTCTCATATCCCATTGT
AGATCGCGTTGAGTTGTACGCTAAAGGTGGGCAACTATGGTATTCCACTGATTATGATGTGTTAGGTTTTTCTGGAAATA
AAGATGATGAAGGTGTGTTCGCCGGTGCCGGTGTCGCATTTAAAGTCACAGATCGATTCTTAATTAATGCCGAGTACACT
TGGTATGATGCAGGAATTACCGTTGAGAATGTTAGCAGCGGTGCAGATACAGACACAGACTTTAAACAAGCCAGTTTAGG
TGTTGAATATCGATTCTAA

Upstream 100 bases:

>100_bases
TTTATTAACTTTCTTAAATCTATTTAGCTTGAGTTCGGTAAGTCTGGCATTACTTTTGTAATGTACTTAGTGTATTTAAA
TAATTAACTTGGAGTACATT

Downstream 100 bases:

>100_bases
TTAGTAATTTGTAATTTGTAATTTGTAATTTGTAATTTGTAATAATTATTAAGGCGTGACACTTTGAGTGTTACGCCTTT
TTTACTTTGATTTTATTTTT

Product: OmpA domain-containing protein

Products: NA

Alternate protein names: OmpA Domain Protein Transmembrane Region-Containing Protein; Outer Membrane Protein A; OmpA-Like Transmembrane Region; NB-Dependent Receptor Protein

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKNTILTLAAIISLASVSVYSHAENMKNNDVAENGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEGGYVN
FGDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDEGVFAGAGVAFKVTDRFLINAEYT
WYDAGITVENVSSGADTDTDFKQASLGVEYRF

Sequences:

>Translated_192_residues
MKNTILTLAAIISLASVSVYSHAENMKNNDVAENGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEGGYVN
FGDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDEGVFAGAGVAFKVTDRFLINAEYT
WYDAGITVENVSSGADTDTDFKQASLGVEYRF
>Mature_192_residues
MKNTILTLAAIISLASVSVYSHAENMKNNDVAENGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEGGYVN
FGDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDEGVFAGAGVAFKVTDRFLINAEYT
WYDAGITVENVSSGADTDTDFKQASLGVEYRF

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20954; Mature: 20954

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTILTLAAIISLASVSVYSHAENMKNNDVAENGIYVGANYGYLKVDGKDDFDDNSDVI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHH
QGLVGYRFNQYLAIEGGYVNFGDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLW
HHHHCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCEEE
YSTDYDVLGFSGNKDDEGVFAGAGVAFKVTDRFLINAEYTWYDAGITVENVSSGADTDTD
EECCCEEEECCCCCCCCCEEECCCEEEEEEEEEEEEEEEEEEECCEEEECCCCCCCCCCC
FKQASLGVEYRF
CHHHHCCEEECC
>Mature Secondary Structure
MKNTILTLAAIISLASVSVYSHAENMKNNDVAENGIYVGANYGYLKVDGKDDFDDNSDVI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHH
QGLVGYRFNQYLAIEGGYVNFGDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLW
HHHHCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCEEE
YSTDYDVLGFSGNKDDEGVFAGAGVAFKVTDRFLINAEYTWYDAGITVENVSSGADTDTD
EECCCEEEECCCCCCCCCEEECCCEEEEEEEEEEEEEEEEEEECCEEEECCCCCCCCCCC
FKQASLGVEYRF
CHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA