| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is puuP [H]
Identifier: 160873652
GI number: 160873652
Start: 610496
End: 611827
Strand: Direct
Name: puuP [H]
Synonym: Sbal195_0530
Alternate gene names: 160873652
Gene position: 610496-611827 (Clockwise)
Preceding gene: 160873651
Following gene: 160873655
Centisome position: 11.42
GC content: 47.52
Gene sequence:
>1332_bases ATGAGTCAACACAAACCGGGTTTGAAGCAGACCCTCAATTTATGGCAAGTGGTAGTGATGGGGCTCGCCTATCTCACACC TATGGCTGTTTTTGACACCTTTGGTATTGTTTCTGAGATTACCTCTGGCCATGTGGCTACGTCCTATCTATTCGCACTGG CGGGAATTTTGTTTACCGCATTCAGTTATGGCCATTTAGTGCGTAAATATCCCTATGCGGGGTCAGCCTACACTTACGCC CAGAAAACTTTTAGTCCGAATGTCGGTTTTATGGTGGGCTGGTCGTCGCTACTTGATTATATGTTTATGCCAATGATCAA CATGTTGCTGGCAAAAATCTATTTAACTGCCATGTTCCCCACTGTCGAACCTTGGATCTTCATTTTCGCACTCGTGACCA TAATGACCCTGCTCAATCTTAAAGGGATTGATCTGGTGGCTAACTTTAATGGGGTGATAGTGTTTGTGCAAATCGCCATT ATCCTCGTGTTTATTGCATTAATGGCCTATAGCATTTCCCTTGGTGAAGGCGAAGGTGCGATTGCAAGCGTGCGACCATT TTATGCCGAGAATATGGCGATTGTGCCGTTATTTACTGGCGCCACTATTCTGTGTTTTTCCTTCCTCGGCTTTGACGGTT TGAGCTCGCTGACCGAAGAAACGAAGGATGCGCAGCGTGTTATTCCGCGCGCGATTGTGTTGACCGCCTTGATTGGTGGG GTGATTTTTGTCGGCGTGTCTTATTTTCTTCAGCTTTATTTCCCCGATATTTCCCGCTTCCAGGAGCTTGATGCTGTATT GCCCGAAATCGCACTCTATGTTGGAGGAAACTTATTCCAGTCCATCGTATTAGTGGCGACTACAGTGGCGGTGTTGGCAT CCGGTATGGCTGCCCACGCTGGCGTTGCACGGATTTTGTATGTGATGGGGCGGGACAACATGCTGCCACGTAAAGGGTTT GCTTATATCCACCCTAAGTGGCGCACCCCTGCATTTAATGTTTTGTTGGTGGGGGCATTGGCGCTGTCTGCCGTATCATT TGATTTGGAAATGGCCTTAGCCTTAGTTAACTTTGGCGCCTTAGTGGCGTTCACCTTCGTGAACTTAGCCGTCATTGTGC AGTTTTATGTGAGGGATCGACGTAATCAATCCTTTAAGGATCACCTGCAATACTTAGTCTTGCCCCTGTGTGGCGCCGGC ACTATTGGGGTACTTTGGGCGAACTTAGAGCCACAGTCTTTAGAGTTGGGATTGATTTGGGCTGCCGTGGGAGCTTTATA TTTAACCCTGCGTAGCATACGTTTACGCCGAATTGTAGAGTTACACAATTAG
Upstream 100 bases:
>100_bases AGTTAGCCATTAAGCCTAAAGTGCTGATGGTGAGTCACATGCCAAAACCAATTGCAGATGCATGGTTAGCTGTTCACCCC TGTGCAATGGGGGCGTGCTC
Downstream 100 bases:
>100_bases TTGCAGCATAGGATTGTAGAGTCGCAGTTATTGCTTACAACTGACAAGGGTTTGATTGAGCTGTCATAGTTTTCTAATAA AACGTCCAACTGAAAAGACC
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSQHKPGLKQTLNLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLFALAGILFTAFSYGHLVRKYPYAGSAYTYA QKTFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFPTVEPWIFIFALVTIMTLLNLKGIDLVANFNGVIVFVQIAI ILVFIALMAYSISLGEGEGAIASVRPFYAENMAIVPLFTGATILCFSFLGFDGLSSLTEETKDAQRVIPRAIVLTALIGG VIFVGVSYFLQLYFPDISRFQELDAVLPEIALYVGGNLFQSIVLVATTVAVLASGMAAHAGVARILYVMGRDNMLPRKGF AYIHPKWRTPAFNVLLVGALALSAVSFDLEMALALVNFGALVAFTFVNLAVIVQFYVRDRRNQSFKDHLQYLVLPLCGAG TIGVLWANLEPQSLELGLIWAAVGALYLTLRSIRLRRIVELHN
Sequences:
>Translated_443_residues MSQHKPGLKQTLNLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLFALAGILFTAFSYGHLVRKYPYAGSAYTYA QKTFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFPTVEPWIFIFALVTIMTLLNLKGIDLVANFNGVIVFVQIAI ILVFIALMAYSISLGEGEGAIASVRPFYAENMAIVPLFTGATILCFSFLGFDGLSSLTEETKDAQRVIPRAIVLTALIGG VIFVGVSYFLQLYFPDISRFQELDAVLPEIALYVGGNLFQSIVLVATTVAVLASGMAAHAGVARILYVMGRDNMLPRKGF AYIHPKWRTPAFNVLLVGALALSAVSFDLEMALALVNFGALVAFTFVNLAVIVQFYVRDRRNQSFKDHLQYLVLPLCGAG TIGVLWANLEPQSLELGLIWAAVGALYLTLRSIRLRRIVELHN >Mature_442_residues SQHKPGLKQTLNLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLFALAGILFTAFSYGHLVRKYPYAGSAYTYAQ KTFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFPTVEPWIFIFALVTIMTLLNLKGIDLVANFNGVIVFVQIAII LVFIALMAYSISLGEGEGAIASVRPFYAENMAIVPLFTGATILCFSFLGFDGLSSLTEETKDAQRVIPRAIVLTALIGGV IFVGVSYFLQLYFPDISRFQELDAVLPEIALYVGGNLFQSIVLVATTVAVLASGMAAHAGVARILYVMGRDNMLPRKGFA YIHPKWRTPAFNVLLVGALALSAVSFDLEMALALVNFGALVAFTFVNLAVIVQFYVRDRRNQSFKDHLQYLVLPLCGAGT IGVLWANLEPQSLELGLIWAAVGALYLTLRSIRLRRIVELHN
Specific function: Imports putrescine [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI4507047, Length=426, Percent_Identity=24.6478873239437, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI258614005, Length=416, Percent_Identity=25.4807692307692, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI258614003, Length=410, Percent_Identity=25.609756097561, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI114326544, Length=193, Percent_Identity=28.4974093264249, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI114326550, Length=193, Percent_Identity=28.4974093264249, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI258645169, Length=410, Percent_Identity=25.3658536585366, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI186910308, Length=341, Percent_Identity=23.4604105571848, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI186910306, Length=341, Percent_Identity=23.4604105571848, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI186910304, Length=341, Percent_Identity=23.4604105571848, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI87081869, Length=434, Percent_Identity=63.1336405529954, Blast_Score=570, Evalue=1e-164, Organism=Escherichia coli, GI87082023, Length=436, Percent_Identity=62.6146788990826, Blast_Score=561, Evalue=1e-161, Organism=Escherichia coli, GI87082250, Length=348, Percent_Identity=22.7011494252874, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17532491, Length=420, Percent_Identity=24.2857142857143, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17533459, Length=422, Percent_Identity=25.1184834123223, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17531343, Length=402, Percent_Identity=24.8756218905473, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24668806, Length=413, Percent_Identity=25.6658595641646, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI21356285, Length=413, Percent_Identity=25.6658595641646, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI24668802, Length=413, Percent_Identity=25.6658595641646, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI221512776, Length=407, Percent_Identity=22.8501228501229, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24666159, Length=407, Percent_Identity=22.8501228501229, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24667468, Length=400, Percent_Identity=24, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI281366235, Length=403, Percent_Identity=25.5583126550869, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI116007820, Length=403, Percent_Identity=25.5583126550869, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI116007818, Length=403, Percent_Identity=25.5583126550869, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI85725152, Length=403, Percent_Identity=25.5583126550869, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI161077963, Length=402, Percent_Identity=22.8855721393035, Blast_Score=79, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 48673; Mature: 48542
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHKPGLKQTLNLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLFALAGILFTA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FSYGHLVRKYPYAGSAYTYAQKTFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFP HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCC TVEPWIFIFALVTIMTLLNLKGIDLVANFNGVIVFVQIAIILVFIALMAYSISLGEGEGA CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IASVRPFYAENMAIVPLFTGATILCFSFLGFDGLSSLTEETKDAQRVIPRAIVLTALIGG EEECCCHHHCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIFVGVSYFLQLYFPDISRFQELDAVLPEIALYVGGNLFQSIVLVATTVAVLASGMAAHA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH GVARILYVMGRDNMLPRKGFAYIHPKWRTPAFNVLLVGALALSAVSFDLEMALALVNFGA HHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAFTFVNLAVIVQFYVRDRRNQSFKDHLQYLVLPLCGAGTIGVLWANLEPQSLELGLIW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH AAVGALYLTLRSIRLRRIVELHN HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQHKPGLKQTLNLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLFALAGILFTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FSYGHLVRKYPYAGSAYTYAQKTFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFP HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCC TVEPWIFIFALVTIMTLLNLKGIDLVANFNGVIVFVQIAIILVFIALMAYSISLGEGEGA CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IASVRPFYAENMAIVPLFTGATILCFSFLGFDGLSSLTEETKDAQRVIPRAIVLTALIGG EEECCCHHHCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIFVGVSYFLQLYFPDISRFQELDAVLPEIALYVGGNLFQSIVLVATTVAVLASGMAAHA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH GVARILYVMGRDNMLPRKGFAYIHPKWRTPAFNVLLVGALALSAVSFDLEMALALVNFGA HHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAFTFVNLAVIVQFYVRDRRNQSFKDHLQYLVLPLCGAGTIGVLWANLEPQSLELGLIW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH AAVGALYLTLRSIRLRRIVELHN HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]