| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160873634
Identifier: 160873634
GI number: 160873634
Start: 585282
End: 585830
Strand: Direct
Name: 160873634
Synonym: Sbal195_0512
Alternate gene names: NA
Gene position: 585282-585830 (Clockwise)
Preceding gene: 160873633
Following gene: 160873635
Centisome position: 10.95
GC content: 43.9
Gene sequence:
>549_bases ATGAAAAGACAACAAGGTTTTACCTTAATTGAATTAGTCGTAGTGATCATTATCTTAGGTATTCTTGCTGTCACAGCGGC ACCTAAGTTTATTAATTTGCAAGGTGATGCAAGAGCTTCAACTATTCAAGGTATGAAGGGGGCTATTCAAGGGGCGAATA GCTTAATTTATTCAAAAGCTGCATTACTTGGAATTGAAGGCGCTGCAACAGGTAGTGTTGATGTGCTCGGTAATACTGTT GCAGGGACTCCTGCGACAGGTACTGCTGACGATGTTCCAGTTGTCTTTGGTTATATGGCTGCGACAGAAGCAGCTTTAGA AGCGGGAATGGATGTGGCTTTTGATACAGGTACTTCACCTTCTGTAGCAGGCAGTAGTGACTGGATTATTAATGTAGTAG GCAATAGCGCTACAATTTGGCAGCGTGGCGCTCCTGCTGACGTAGCTGCTGCAGGCTCTGAACCAGCGAAAAGCTGTAAG ATTGTTTATACACAAGCAGCAAGTGCAGGTGCCTTGCCAACGATTACTGTTACAGATAATGGTTGTTAA
Upstream 100 bases:
>100_bases CAGTTTTATTTTGTTCATGTTTTAAGTAACTTAGTTCAGAAGTGACTTAACTTAATTAGTGCTCACACGAGTACTCACTG ATAAAGAAAGGTAGTTTGAT
Downstream 100 bases:
>100_bases TTTTAATTACGGAAAAGGCCTGCCTAGCAGGCCTTTTTTTTAGGTAAAATGCGGTTCTTACAGGATTTTAAAGAAATGAG TCCACCAAGAATTTACCGAC
Product: methylation site containing protein
Products: NA
Alternate protein names: MSHA Pilin Protein MshA; Type IV Pilus Mannose-Sensitive Hemagglutinin A; Type II Secretory Pathway Pseudopilin; MAnnose-Sensitive Hemagglutinin A; Mannose-Sensitive Agglutinin; Msha Pilin Protein Msha; MshA Mannose-Sensitive Haemaglutinin; Methylation; Mannose-Sensitive Hemagglutinin A
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKRQQGFTLIELVVVIIILGILAVTAAPKFINLQGDARASTIQGMKGAIQGANSLIYSKAALLGIEGAATGSVDVLGNTV AGTPATGTADDVPVVFGYMAATEAALEAGMDVAFDTGTSPSVAGSSDWIINVVGNSATIWQRGAPADVAAAGSEPAKSCK IVYTQAASAGALPTITVTDNGC
Sequences:
>Translated_182_residues MKRQQGFTLIELVVVIIILGILAVTAAPKFINLQGDARASTIQGMKGAIQGANSLIYSKAALLGIEGAATGSVDVLGNTV AGTPATGTADDVPVVFGYMAATEAALEAGMDVAFDTGTSPSVAGSSDWIINVVGNSATIWQRGAPADVAAAGSEPAKSCK IVYTQAASAGALPTITVTDNGC >Mature_182_residues MKRQQGFTLIELVVVIIILGILAVTAAPKFINLQGDARASTIQGMKGAIQGANSLIYSKAALLGIEGAATGSVDVLGNTV AGTPATGTADDVPVVFGYMAATEAALEAGMDVAFDTGTSPSVAGSSDWIINVVGNSATIWQRGAPADVAAAGSEPAKSCK IVYTQAASAGALPTITVTDNGC
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18143; Mature: 18143
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00409 PROKAR_NTER_METHYL ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQQGFTLIELVVVIIILGILAVTAAPKFINLQGDARASTIQGMKGAIQGANSLIYSKA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH ALLGIEGAATGSVDVLGNTVAGTPATGTADDVPVVFGYMAATEAALEAGMDVAFDTGTSP HHEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCC SVAGSSDWIINVVGNSATIWQRGAPADVAAAGSEPAKSCKIVYTQAASAGALPTITVTDN CCCCCCCEEEEEECCCEEEEECCCCCCEECCCCCCCCCEEEEEEECCCCCCCCEEEEECC GC CC >Mature Secondary Structure MKRQQGFTLIELVVVIIILGILAVTAAPKFINLQGDARASTIQGMKGAIQGANSLIYSKA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH ALLGIEGAATGSVDVLGNTVAGTPATGTADDVPVVFGYMAATEAALEAGMDVAFDTGTSP HHEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCC SVAGSSDWIINVVGNSATIWQRGAPADVAAAGSEPAKSCKIVYTQAASAGALPTITVTDN CCCCCCCEEEEEECCCEEEEECCCCCCEECCCCCCCCCEEEEEEECCCCCCCCEEEEECC GC CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA