| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873623
Identifier: 160873623
GI number: 160873623
Start: 574560
End: 575438
Strand: Direct
Name: 160873623
Synonym: Sbal195_0501
Alternate gene names: NA
Gene position: 574560-575438 (Clockwise)
Preceding gene: 160873622
Following gene: 160873624
Centisome position: 10.74
GC content: 45.28
Gene sequence:
>879_bases ATGGAAAAAAGTCTTATAGGTCGACTCGCCTTTTGGCAGAAAAGAACGGATCCGACTAGCCTTGGCGTCTATGTTTGTGC CGATAAATTATGGGTTTACGCACCTGCTCAAGGGGATAGTGCTGAGCAGTGGTTGCCGTTTGAGCTTAAAGATGAACACT GGTCATCGGCGTTTGCTGCCGTCGCTAAATCCTTCCCTAATGCCCAGCTACAACTGATTTTGGCTTCAGGGCTCTATCAA TTACTGCTGACCGATAAACCCAATGTCGATACTGTCGAATTATCCCAAGCCTTGCTGTGGTCAATTAAAGACATGGTTAC GCTACCTGTGCCGCAAATCCATTTAGACTATTTCGAGTCACCCATTCCCAGTAATAAAATCAATGTGGTGGTGGTCGATA AAGCTAAACTCGTGAGTATGGTACAGGCCATTCATGAACAAAATTTACAACTTATCGGTATCAGTATCGAAGAGTTAGCC ATGACCAACTTATTTGGTGATGACAACCAAGCTCGTCTGGTGGTCAGCCATATTCCAGGGCAAGAGTTGTTATTGACTGT GGTTAAGCAAGGTCAGCTGTATATGCAGCGGCGTGTGCGCGGATTTGCTCAGCTGGATAAGACCCAAGCCGATGAGTTAA CTTATGGCATGGCAGATAATTTAAGTTTAGAAATTCAGCGCTCTATGGATTACTTTGAAAGCCAGTTAAGACAAGCTCCA GTATCTTCTATTGAGCTCCTTGCCGATGGCGCCGTGGATACTTTAGCTAAGCTAGTGTCGGCAAACTTTAATCAAGCTGT GAATGTTATAGATAAAAGCTGTGTTGGCGCGCGAATGGCGGGATTAGCCTTCGCAGAATTTTCCAGAGGTGCTGAGTGA
Upstream 100 bases:
>100_bases GCAGCTCATAGGGCAAGGAACACTGGAGAGTGGGGTGACAGGAAGTTTAAGCATAAGAGACTACTCACGCTTTTAAATTC AGTTGGTTACAGGCATCTTT
Downstream 100 bases:
>100_bases TTAAATACCGAGTCAATCTCTACACTCCTTCCTTACTTCCGCCGAAGCAAAGATTAACCTTTGCACGTTTGGGGGCTTAT GCTGCGGGATTTTTGGTCCT
Product: biogenesis protein MshI
Products: NA
Alternate protein names: Mannose-Sensitive Agglutinin Biogenesis Protein MshI; MSHA Biogenesis Protein MshI; Type II Secretory Pathway Component; Mannose-Sensitive Agglutinin; Mannose-Sensitive Agglutininwith Frame Shift; Type IV Pilus Mannose-Sensitive Hemagglutinin D
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MEKSLIGRLAFWQKRTDPTSLGVYVCADKLWVYAPAQGDSAEQWLPFELKDEHWSSAFAAVAKSFPNAQLQLILASGLYQ LLLTDKPNVDTVELSQALLWSIKDMVTLPVPQIHLDYFESPIPSNKINVVVVDKAKLVSMVQAIHEQNLQLIGISIEELA MTNLFGDDNQARLVVSHIPGQELLLTVVKQGQLYMQRRVRGFAQLDKTQADELTYGMADNLSLEIQRSMDYFESQLRQAP VSSIELLADGAVDTLAKLVSANFNQAVNVIDKSCVGARMAGLAFAEFSRGAE
Sequences:
>Translated_292_residues MEKSLIGRLAFWQKRTDPTSLGVYVCADKLWVYAPAQGDSAEQWLPFELKDEHWSSAFAAVAKSFPNAQLQLILASGLYQ LLLTDKPNVDTVELSQALLWSIKDMVTLPVPQIHLDYFESPIPSNKINVVVVDKAKLVSMVQAIHEQNLQLIGISIEELA MTNLFGDDNQARLVVSHIPGQELLLTVVKQGQLYMQRRVRGFAQLDKTQADELTYGMADNLSLEIQRSMDYFESQLRQAP VSSIELLADGAVDTLAKLVSANFNQAVNVIDKSCVGARMAGLAFAEFSRGAE >Mature_292_residues MEKSLIGRLAFWQKRTDPTSLGVYVCADKLWVYAPAQGDSAEQWLPFELKDEHWSSAFAAVAKSFPNAQLQLILASGLYQ LLLTDKPNVDTVELSQALLWSIKDMVTLPVPQIHLDYFESPIPSNKINVVVVDKAKLVSMVQAIHEQNLQLIGISIEELA MTNLFGDDNQARLVVSHIPGQELLLTVVKQGQLYMQRRVRGFAQLDKTQADELTYGMADNLSLEIQRSMDYFESQLRQAP VSSIELLADGAVDTLAKLVSANFNQAVNVIDKSCVGARMAGLAFAEFSRGAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32372; Mature: 32372
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSLIGRLAFWQKRTDPTSLGVYVCADKLWVYAPAQGDSAEQWLPFELKDEHWSSAFAA CCHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCEECCHHHHHHHHH VAKSFPNAQLQLILASGLYQLLLTDKPNVDTVELSQALLWSIKDMVTLPVPQIHLDYFES HHHHCCCHHEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHCC PIPSNKINVVVVDKAKLVSMVQAIHEQNLQLIGISIEELAMTNLFGDDNQARLVVSHIPG CCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEEEEECCC QELLLTVVKQGQLYMQRRVRGFAQLDKTQADELTYGMADNLSLEIQRSMDYFESQLRQAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCC VSSIELLADGAVDTLAKLVSANFNQAVNVIDKSCVGARMAGLAFAEFSRGAE HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEKSLIGRLAFWQKRTDPTSLGVYVCADKLWVYAPAQGDSAEQWLPFELKDEHWSSAFAA CCHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCEECCHHHHHHHHH VAKSFPNAQLQLILASGLYQLLLTDKPNVDTVELSQALLWSIKDMVTLPVPQIHLDYFES HHHHCCCHHEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHCC PIPSNKINVVVVDKAKLVSMVQAIHEQNLQLIGISIEELAMTNLFGDDNQARLVVSHIPG CCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEEEEECCC QELLLTVVKQGQLYMQRRVRGFAQLDKTQADELTYGMADNLSLEIQRSMDYFESQLRQAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCC VSSIELLADGAVDTLAKLVSANFNQAVNVIDKSCVGARMAGLAFAEFSRGAE HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA