| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873611
Identifier: 160873611
GI number: 160873611
Start: 559670
End: 560422
Strand: Reverse
Name: 160873611
Synonym: Sbal195_0489
Alternate gene names: NA
Gene position: 560422-559670 (Counterclockwise)
Preceding gene: 160873615
Following gene: 160873609
Centisome position: 10.48
GC content: 46.75
Gene sequence:
>753_bases ATGAAAAAAACATGCCTATGCCTAGCACTCATGCTTTCTCCTCAAGCATTTGCGGGTGACTTAGTACAATGGTGGGATTT CAGTGCAACAGCCCTCTATGGCGAAGACTACGATTTAGCACCATCGGACAAACAAGCCACTATCACCTTAGAAACGGCGG GCGGCTGGAAATACGGTGATTGGTTTGCCTTCCAAGACTTTATCTATTTCAAAGGCAACGATACAGGCATGGAAAGCACT ACCTATGGTGAGATTTCGCCACGCTTCAGTGCCAGCAAAATCCTCGGCGAGAAAATCGCCTTTGGTCCAGTGACAGATTT ATCTCTGGCACTGACCTATGAAGAAGGTGAAGGCCCAGTTCACAGCCTGCTTTACGGTTTAGGCGTTGATGTCGCCGTGC CTTATTTCACTTACCTGAACTTTAATACCTATCGCCGCAATAGCATGAGCACTGGCAACAATAGTGACGGCTGGCAGTTC ACCCCAGTATTTCGCATCGACATTCCCGTTGGCTCAGCCAACATAGTGCTCGATGGCTTTATCGACTGGGTATTTGCCAC CGATGATAATGGCTACGAGGAGAACTTCCACTTCAATCCACAGTTGAAATACGATCTAGGTAAGAGTCTGTTCGGTGATC ATCAAGCCAATAAATTATTGGTGGGTATCGAATACGATTTGTGGACCAATAAATACGGTGTGAAAGGCGTCGATCAAGAC ACTTACTCTGTGATTGCCCAGTACCACTTCTAA
Upstream 100 bases:
>100_bases CCACGCTAGGTTTGAACTTACCCATCAAACCATGCCATAGGTCAGAGAGCGGATTGAGTAAGACACGAATTAACTTCGAC CTATACAACAGGAAATAACA
Downstream 100 bases:
>100_bases TCGGTATAGACACAATTTTGAAGTAACAAAAAAGGTGCCATTGGCACCTTTTTTAGTTTGGTCACTCACTTTGCAGGGGA GTGTCGCTTAGCGTAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKKTCLCLALMLSPQAFAGDLVQWWDFSATALYGEDYDLAPSDKQATITLETAGGWKYGDWFAFQDFIYFKGNDTGMEST TYGEISPRFSASKILGEKIAFGPVTDLSLALTYEEGEGPVHSLLYGLGVDVAVPYFTYLNFNTYRRNSMSTGNNSDGWQF TPVFRIDIPVGSANIVLDGFIDWVFATDDNGYEENFHFNPQLKYDLGKSLFGDHQANKLLVGIEYDLWTNKYGVKGVDQD TYSVIAQYHF
Sequences:
>Translated_250_residues MKKTCLCLALMLSPQAFAGDLVQWWDFSATALYGEDYDLAPSDKQATITLETAGGWKYGDWFAFQDFIYFKGNDTGMEST TYGEISPRFSASKILGEKIAFGPVTDLSLALTYEEGEGPVHSLLYGLGVDVAVPYFTYLNFNTYRRNSMSTGNNSDGWQF TPVFRIDIPVGSANIVLDGFIDWVFATDDNGYEENFHFNPQLKYDLGKSLFGDHQANKLLVGIEYDLWTNKYGVKGVDQD TYSVIAQYHF >Mature_250_residues MKKTCLCLALMLSPQAFAGDLVQWWDFSATALYGEDYDLAPSDKQATITLETAGGWKYGDWFAFQDFIYFKGNDTGMEST TYGEISPRFSASKILGEKIAFGPVTDLSLALTYEEGEGPVHSLLYGLGVDVAVPYFTYLNFNTYRRNSMSTGNNSDGWQF TPVFRIDIPVGSANIVLDGFIDWVFATDDNGYEENFHFNPQLKYDLGKSLFGDHQANKLLVGIEYDLWTNKYGVKGVDQD TYSVIAQYHF
Specific function: Unknown
COG id: COG3248
COG function: function code M; Nucleoside-binding outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28096; Mature: 28096
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTCLCLALMLSPQAFAGDLVQWWDFSATALYGEDYDLAPSDKQATITLETAGGWKYGD CCCHHEEEEEHHCCCHHHCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCC WFAFQDFIYFKGNDTGMESTTYGEISPRFSASKILGEKIAFGPVTDLSLALTYEEGEGPV EEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCHH HSLLYGLGVDVAVPYFTYLNFNTYRRNSMSTGNNSDGWQFTPVFRIDIPVGSANIVLDGF HHHHHHCCCCEEEEEEEEEECCEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEE IDWVFATDDNGYEENFHFNPQLKYDLGKSLFGDHQANKLLVGIEYDLWTNKYGVKGVDQD EEEEEEECCCCCCCCEEECCEECCCCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCC TYSVIAQYHF HHEEEEEECC >Mature Secondary Structure MKKTCLCLALMLSPQAFAGDLVQWWDFSATALYGEDYDLAPSDKQATITLETAGGWKYGD CCCHHEEEEEHHCCCHHHCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCC WFAFQDFIYFKGNDTGMESTTYGEISPRFSASKILGEKIAFGPVTDLSLALTYEEGEGPV EEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCHH HSLLYGLGVDVAVPYFTYLNFNTYRRNSMSTGNNSDGWQFTPVFRIDIPVGSANIVLDGF HHHHHHCCCCEEEEEEEEEECCEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEE IDWVFATDDNGYEENFHFNPQLKYDLGKSLFGDHQANKLLVGIEYDLWTNKYGVKGVDQD EEEEEEECCCCCCCCEEECCEECCCCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCC TYSVIAQYHF HHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA