| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873588
Identifier: 160873588
GI number: 160873588
Start: 533273
End: 533848
Strand: Reverse
Name: 160873588
Synonym: Sbal195_0464
Alternate gene names: NA
Gene position: 533848-533273 (Counterclockwise)
Preceding gene: 160873589
Following gene: 160873587
Centisome position: 9.98
GC content: 47.22
Gene sequence:
>576_bases ATGAGTCGTTTGCAGTCATCGAAGGGTTTTACATTAATAGAACTGGTTGTGGTCATTATCATCCTTGGGATCTTGGCCGT CGTTGCGGCACCTAAGTTTTTAAACCTAGGCCAAGATGCCCACGATGCTAGAGCCAAAACCGCATTTGCGGCCTTTACCT CTGGCGTTAAGCTTTACCACAGCTGCTGGCTTGCAGGCGGTCACTCAGGTTATACCCAAGATCTCGCTTGCTATGGCGAT GGTAAACTCGACTCGAGCACGACAGGATTTCCACTGGGAACAGAGACTGCAACCGCTGATGCCGGTGTTAAATTGCAGGG CGATTATTGCGGTCAGTTATGGCAAGGTCTTTTGGCTAATAATGAATTTATCATTGCTACTCAATATACTTGGCGCACAG TTCCCAATGTCGACATTGTTTACTGGTATGGTGCCGTCGACATTACCGATCCCAATGCTTACTGTATTTTCAACTATGTC TCGGACGATCGCAGCTTCGGCAGTGAAAACTGGGATTTTAAATACTATCCCTATAGTGGAAAGACTGAAGTCGGTCGCTC AACCCTTCCCCAGTAA
Upstream 100 bases:
>100_bases CGTTAAACAGAATGTTAAACAAATAAATACTATCAATGACTTACTGATTGCGAATCGAAGTTCCGTTAGAATATCCCCCT CTAACAGATAGGTGAGCAAT
Downstream 100 bases:
>100_bases GCGCTTATTTTTGCAGCCAAAGGTGCGCGAAAGATCGCAAACTCCTTTGGCTTTTCTCGCTATAACTTGAATTATTGTCA TCTATCCCCATATCTACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: MshA-Like Protein; MSHA Pilin Protein MshB
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSRLQSSKGFTLIELVVVIIILGILAVVAAPKFLNLGQDAHDARAKTAFAAFTSGVKLYHSCWLAGGHSGYTQDLACYGD GKLDSSTTGFPLGTETATADAGVKLQGDYCGQLWQGLLANNEFIIATQYTWRTVPNVDIVYWYGAVDITDPNAYCIFNYV SDDRSFGSENWDFKYYPYSGKTEVGRSTLPQ
Sequences:
>Translated_191_residues MSRLQSSKGFTLIELVVVIIILGILAVVAAPKFLNLGQDAHDARAKTAFAAFTSGVKLYHSCWLAGGHSGYTQDLACYGD GKLDSSTTGFPLGTETATADAGVKLQGDYCGQLWQGLLANNEFIIATQYTWRTVPNVDIVYWYGAVDITDPNAYCIFNYV SDDRSFGSENWDFKYYPYSGKTEVGRSTLPQ >Mature_190_residues SRLQSSKGFTLIELVVVIIILGILAVVAAPKFLNLGQDAHDARAKTAFAAFTSGVKLYHSCWLAGGHSGYTQDLACYGDG KLDSSTTGFPLGTETATADAGVKLQGDYCGQLWQGLLANNEFIIATQYTWRTVPNVDIVYWYGAVDITDPNAYCIFNYVS DDRSFGSENWDFKYYPYSGKTEVGRSTLPQ
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20898; Mature: 20766
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLQSSKGFTLIELVVVIIILGILAVVAAPKFLNLGQDAHDARAKTAFAAFTSGVKLYH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SCWLAGGHSGYTQDLACYGDGKLDSSTTGFPLGTETATADAGVKLQGDYCGQLWQGLLAN HHEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCC NEFIIATQYTWRTVPNVDIVYWYGAVDITDPNAYCIFNYVSDDRSFGSENWDFKYYPYSG CCEEEEEEEEEEECCCCEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCCC KTEVGRSTLPQ CCCCCCCCCCC >Mature Secondary Structure SRLQSSKGFTLIELVVVIIILGILAVVAAPKFLNLGQDAHDARAKTAFAAFTSGVKLYH CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SCWLAGGHSGYTQDLACYGDGKLDSSTTGFPLGTETATADAGVKLQGDYCGQLWQGLLAN HHEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCC NEFIIATQYTWRTVPNVDIVYWYGAVDITDPNAYCIFNYVSDDRSFGSENWDFKYYPYSG CCEEEEEEEEEEECCCCEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCCC KTEVGRSTLPQ CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA