| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873559
Identifier: 160873559
GI number: 160873559
Start: 499489
End: 499743
Strand: Direct
Name: 160873559
Synonym: Sbal195_0434
Alternate gene names: NA
Gene position: 499489-499743 (Clockwise)
Preceding gene: 160873546
Following gene: 160873560
Centisome position: 9.34
GC content: 41.57
Gene sequence:
>255_bases GTGCCTATGGAAGCTGTAAATACGATTGAAATTATTGGTTATTTTGCCTCTGTAATGGTGGCGATCTCTCTAATGATGAA GAATATCATTTGGTTGCGATGGTTGAATTTTGTGGGATGTACCCTGTTTGTTGTTTATGGGGTGTTTATTTCTGCTTGGC CAGTGGCCGGCATGAATGCGTTTGTTGCTTGTATTAATATTTACCATTTGACGAAAATTTACCGCGCTAAGGCGAATACT CCCGCCGCAGCCTAA
Upstream 100 bases:
>100_bases TGGTATTATATCCCAAGTTTAAATTAACTTACTTAACTTAATTTGCTTTAGGGGCATGGACCCCCCGTTACGCTTATGGA CGGTAGAGGGCCTTCGAGAG
Downstream 100 bases:
>100_bases GTTTATTTGATTGTGTTGCTCTTGGGATTCACATTTAGAGCAACACAATATCCTGTCTCAGCCCTATCGCTATTCCTGAA AAAATCCCTTAGCTCCAGCA
Product: uroporphyrinogen decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MPMEAVNTIEIIGYFASVMVAISLMMKNIIWLRWLNFVGCTLFVVYGVFISAWPVAGMNAFVACINIYHLTKIYRAKANT PAAA
Sequences:
>Translated_84_residues MPMEAVNTIEIIGYFASVMVAISLMMKNIIWLRWLNFVGCTLFVVYGVFISAWPVAGMNAFVACINIYHLTKIYRAKANT PAAA >Mature_83_residues PMEAVNTIEIIGYFASVMVAISLMMKNIIWLRWLNFVGCTLFVVYGVFISAWPVAGMNAFVACINIYHLTKIYRAKANTP AAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019629 [H]
Pfam domain/function: PF10688 Imp-YgjV [H]
EC number: NA
Molecular weight: Translated: 9363; Mature: 9232
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMEAVNTIEIIGYFASVMVAISLMMKNIIWLRWLNFVGCTLFVVYGVFISAWPVAGMNA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FVACINIYHLTKIYRAKANTPAAA HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PMEAVNTIEIIGYFASVMVAISLMMKNIIWLRWLNFVGCTLFVVYGVFISAWPVAGMNA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FVACINIYHLTKIYRAKANTPAAA HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]