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The map label for this gene is hipB [C]

Identifier: 160873503

GI number: 160873503

Start: 432234

End: 432515

Strand: Direct

Name: hipB [C]

Synonym: Sbal195_0378

Alternate gene names: 160873503

Gene position: 432234-432515 (Clockwise)

Preceding gene: 160873502

Following gene: 160873504

Centisome position: 8.08

GC content: 48.94

Gene sequence:

>282_bases
ATGAAGGTGACCAACGCAAAGCAGTTGAGTACGTATCTAAAAGATGCGCGGCTGAACGCGCAGCTCTCGCAAAGCAAGGT
GGCGAGCAAGGTAGGTATTCGCCAGGATACCGTTTCAAGCTTTGAGTTGAACCCGGATTCGACCAAATTAGAAACGCTGT
TTAAGATCCTTTCTGCATTAAACCTAGAGCTAGATATAAAGGTTCGGAATCCACAGCTGGTGGATGAGCGCCGCCATGAT
AACGCCACAGTGCCTGAGCAAGAATGGAAGGAGGAGTGGTAA

Upstream 100 bases:

>100_bases
AGTGTGTGAATGTGTTTTTAACGGTTTAGGCGTGTAAACTTTGACTTACCTGCTTAGCGTGTACAGTAAGAGTTAAGAAC
AGTTTAAAGGTAAAGCTATC

Downstream 100 bases:

>100_bases
TGGCAGTGCTTGATGTTTATATGAATGGCTACCTTGTGCGTGAATTGACCAAATCATCCACAGGCTCTCATCAGTTTGCG
TATGCCCAGCAATGGCTAGC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; HipB Protein; Helix-Turn-Helix Domain-Containing Protein; Protein HipB; HipB-Like Transcriptional Regulator; Transcriptional Regulator Hipb Ortholog; HipB Transcriptional Regulator

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKVTNAKQLSTYLKDARLNAQLSQSKVASKVGIRQDTVSSFELNPDSTKLETLFKILSALNLELDIKVRNPQLVDERRHD
NATVPEQEWKEEW

Sequences:

>Translated_93_residues
MKVTNAKQLSTYLKDARLNAQLSQSKVASKVGIRQDTVSSFELNPDSTKLETLFKILSALNLELDIKVRNPQLVDERRHD
NATVPEQEWKEEW
>Mature_93_residues
MKVTNAKQLSTYLKDARLNAQLSQSKVASKVGIRQDTVSSFELNPDSTKLETLFKILSALNLELDIKVRNPQLVDERRHD
NATVPEQEWKEEW

Specific function: Binds To Operator Sites With The Consensus Sequence 5-'Tatccn(8)GGATA-3' And Repress The Hip Operon Promoter. [C]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10697; Mature: 10697

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTNAKQLSTYLKDARLNAQLSQSKVASKVGIRQDTVSSFELNPDSTKLETLFKILSAL
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHH
NLELDIKVRNPQLVDERRHDNATVPEQEWKEEW
CCEEEEEECCCCCHHHCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MKVTNAKQLSTYLKDARLNAQLSQSKVASKVGIRQDTVSSFELNPDSTKLETLFKILSAL
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHH
NLELDIKVRNPQLVDERRHDNATVPEQEWKEEW
CCEEEEEECCCCCHHHCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA