| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gmk [H]
Identifier: 160873485
GI number: 160873485
Start: 408191
End: 408823
Strand: Reverse
Name: gmk [H]
Synonym: Sbal195_0360
Alternate gene names: 160873485
Gene position: 408823-408191 (Counterclockwise)
Preceding gene: 160873490
Following gene: 160873484
Centisome position: 7.65
GC content: 49.45
Gene sequence:
>633_bases ATGACCGCACGCGGAAATTTATTTATTGTGTCGGCGCCAAGTGGCGCAGGTAAATCCTCGCTGATCTCGGCCTTGCTTAA AGACAAGCCCGCTGACATGCAGGTTTCGGTATCACATACCACCCGCGCGCCACGCCCAGGTGAAGTCGATGGTCAACACT ATCACTTCGTTAATGTTGAACAATTCAAAGCGTTAATTGCTGAAAATGCCTTTTTTGAATGGGCAGAAGTGTTCGGCAAT TACTATGGTACCTCGCGCCATGTGATTGAGCATACGCTCACCCAAGGTATCGATGTTTTCCTCGATATCGACTGGCAAGG TGCCGAGCAAGTTAAAGCTGTGATGCCCGATGCCGTTGGTGTGTTTATTCTGCCACCCTCGAAAGCCGAGCTAGAACGCC GCCTCACTGGCCGTGGACAAGACAGTAGCGATGTGATCGCCAGCCGTATGGCACAAGCCGTATCGGAAATGTCCCACTAT AAAGAATATGATTTTATTATCGTCAACGACGATTTTGACACTGCGTTAGCTGATTTGCGTGCCATCATTCGCAGTCAGCG CTTAACCTGTGCTAGTCAGATCCACGCGCAAAATGATATGCTTAACGATCTGTTGGCAGGCCAACTGTCATAG
Upstream 100 bases:
>100_bases AAATTGCTGGCCTACAAGCCCTAGTATTTCTATGGTCAAAATCGGTATAATGCTCGGCTTTCTGGGCCCTTCTTGCGTTA ACCAATTGGATATTTAGCTC
Downstream 100 bases:
>100_bases TGTACAATTTTGCGTCATTTTTTCCCTAGATAAACTGGAGTTTCAACACATGGCTCGCGTAACTGTAGAAGACGCCGTAG AACAAATCGGCAACCGTTTT
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTARGNLFIVSAPSGAGKSSLISALLKDKPADMQVSVSHTTRAPRPGEVDGQHYHFVNVEQFKALIAENAFFEWAEVFGN YYGTSRHVIEHTLTQGIDVFLDIDWQGAEQVKAVMPDAVGVFILPPSKAELERRLTGRGQDSSDVIASRMAQAVSEMSHY KEYDFIIVNDDFDTALADLRAIIRSQRLTCASQIHAQNDMLNDLLAGQLS
Sequences:
>Translated_210_residues MTARGNLFIVSAPSGAGKSSLISALLKDKPADMQVSVSHTTRAPRPGEVDGQHYHFVNVEQFKALIAENAFFEWAEVFGN YYGTSRHVIEHTLTQGIDVFLDIDWQGAEQVKAVMPDAVGVFILPPSKAELERRLTGRGQDSSDVIASRMAQAVSEMSHY KEYDFIIVNDDFDTALADLRAIIRSQRLTCASQIHAQNDMLNDLLAGQLS >Mature_209_residues TARGNLFIVSAPSGAGKSSLISALLKDKPADMQVSVSHTTRAPRPGEVDGQHYHFVNVEQFKALIAENAFFEWAEVFGNY YGTSRHVIEHTLTQGIDVFLDIDWQGAEQVKAVMPDAVGVFILPPSKAELERRLTGRGQDSSDVIASRMAQAVSEMSHYK EYDFIIVNDDFDTALADLRAIIRSQRLTCASQIHAQNDMLNDLLAGQLS
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=175, Percent_Identity=39.4285714285714, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI226874833, Length=175, Percent_Identity=39.4285714285714, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI4504221, Length=175, Percent_Identity=39.4285714285714, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI262118255, Length=177, Percent_Identity=30.5084745762712, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI4505237, Length=177, Percent_Identity=30.5084745762712, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI262118259, Length=177, Percent_Identity=30.5084745762712, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI262118263, Length=177, Percent_Identity=30.5084745762712, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI38570142, Length=184, Percent_Identity=29.8913043478261, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI14780902, Length=194, Percent_Identity=26.8041237113402, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI21361598, Length=195, Percent_Identity=28.7179487179487, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI111154074, Length=165, Percent_Identity=30.9090909090909, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI21536464, Length=189, Percent_Identity=25.3968253968254, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI119943108, Length=176, Percent_Identity=27.8409090909091, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI261862237, Length=176, Percent_Identity=27.8409090909091, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI119943106, Length=176, Percent_Identity=27.8409090909091, Blast_Score=64, Evalue=7e-11, Organism=Escherichia coli, GI1790080, Length=205, Percent_Identity=66.8292682926829, Blast_Score=289, Evalue=1e-79, Organism=Caenorhabditis elegans, GI193203132, Length=180, Percent_Identity=35, Blast_Score=126, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17508835, Length=180, Percent_Identity=35, Blast_Score=125, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71988041, Length=187, Percent_Identity=28.8770053475936, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71988048, Length=187, Percent_Identity=29.9465240641711, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71984092, Length=157, Percent_Identity=29.9363057324841, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17557440, Length=179, Percent_Identity=25.1396648044693, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=41.2087912087912, Blast_Score=154, Evalue=1e-38, Organism=Drosophila melanogaster, GI21356141, Length=187, Percent_Identity=38.5026737967914, Blast_Score=130, Evalue=5e-31, Organism=Drosophila melanogaster, GI45554481, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI116007136, Length=201, Percent_Identity=27.8606965174129, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI85724806, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI45554489, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24640542, Length=202, Percent_Identity=28.7128712871287, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI161077626, Length=202, Percent_Identity=28.7128712871287, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 23169; Mature: 23038
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARGNLFIVSAPSGAGKSSLISALLKDKPADMQVSVSHTTRAPRPGEVDGQHYHFVNVE CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECHH QFKALIAENAFFEWAEVFGNYYGTSRHVIEHTLTQGIDVFLDIDWQGAEQVKAVMPDAVG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCE VFILPPSKAELERRLTGRGQDSSDVIASRMAQAVSEMSHYKEYDFIIVNDDFDTALADLR EEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHH AIIRSQRLTCASQIHAQNDMLNDLLAGQLS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TARGNLFIVSAPSGAGKSSLISALLKDKPADMQVSVSHTTRAPRPGEVDGQHYHFVNVE CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECHH QFKALIAENAFFEWAEVFGNYYGTSRHVIEHTLTQGIDVFLDIDWQGAEQVKAVMPDAVG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCE VFILPPSKAELERRLTGRGQDSSDVIASRMAQAVSEMSHYKEYDFIIVNDDFDTALADLR EEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHH AIIRSQRLTCASQIHAQNDMLNDLLAGQLS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]