| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873474
Identifier: 160873474
GI number: 160873474
Start: 395124
End: 395858
Strand: Reverse
Name: 160873474
Synonym: Sbal195_0349
Alternate gene names: NA
Gene position: 395858-395124 (Counterclockwise)
Preceding gene: 160873475
Following gene: 160873473
Centisome position: 7.4
GC content: 52.38
Gene sequence:
>735_bases GTGCAACTAACATTCAGCATTCTCTCTTGGGGCGCTTGGGCCCCCCAATATCAGCATCCGCAAAGTTGGCAAACTTGGTG CAAAAACTCGGCTGAATTAAATCTCGACACACCACAGTCTGATACCATAGCTCCCGCACTCAAACACGTTCCAGCCATGC AACGCCGCCGTTTTAGTCGCTTAACTAAAATGATGTTAGAGGTGAGTTTTCAGTGCGAAATGCCTGCAAATTGCCGCTCT ATTTTTGCCTCGCGCCACGGAGAGTTGCAGCGCACCATAGGACTGCTCGAAGACATTATCGCCAAACAGCCCTTATCGCC CTTAGGGTTTAGTCAGTCGGTGCACAACACCGCCAGCGGCATTTTTGGCATAGTGGCGGCCAATACCGCGCCGTCGACCT CAGTTGCCGCAGGTACCGAAACCCTGTCACAAGCTATGGTTGAAGCCTTCGCCCAGTTACACCAGTCGCCAGAGCCCTTG CTGTTAGTCTTCGGTGATGATCCTGTGCCACCTGTGTACGATGAGTTTACCCAAGAATTTGAATTGCCTTTGGCCCTAGG CTTACAGCTCGCGCCCTTCGATGCGCCCGCTTCGGTCAAGCTCACAGTGAGCCGCATCTCAGAGTCGACAGCATTAAATC CTTTGACCTATGGCGCCTTACTCCACGCCCTCGCGACAGCGCAAAATATTTCAGGCTGCTTATCCCAATGGCATTGGAAG CTTGAGCATGTTTAA
Upstream 100 bases:
>100_bases TCAAACGCGTTTACACCTCACTATGGTATGACAATCCATCAATGTTCTAACTTAGTTAGGGATAACTAAGACAGCTTAAA TTTAGTGTCGAGGCAAAGTA
Downstream 100 bases:
>100_bases TACTGCCCACAGCCATGACGCCGCCAAGGATTATGAAGATTCAATGCACAATGCCGCTTTTACCTTGCCGGAAACTCGCC GCGCTGGGCTGAATTATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MQLTFSILSWGAWAPQYQHPQSWQTWCKNSAELNLDTPQSDTIAPALKHVPAMQRRRFSRLTKMMLEVSFQCEMPANCRS IFASRHGELQRTIGLLEDIIAKQPLSPLGFSQSVHNTASGIFGIVAANTAPSTSVAAGTETLSQAMVEAFAQLHQSPEPL LLVFGDDPVPPVYDEFTQEFELPLALGLQLAPFDAPASVKLTVSRISESTALNPLTYGALLHALATAQNISGCLSQWHWK LEHV
Sequences:
>Translated_244_residues MQLTFSILSWGAWAPQYQHPQSWQTWCKNSAELNLDTPQSDTIAPALKHVPAMQRRRFSRLTKMMLEVSFQCEMPANCRS IFASRHGELQRTIGLLEDIIAKQPLSPLGFSQSVHNTASGIFGIVAANTAPSTSVAAGTETLSQAMVEAFAQLHQSPEPL LLVFGDDPVPPVYDEFTQEFELPLALGLQLAPFDAPASVKLTVSRISESTALNPLTYGALLHALATAQNISGCLSQWHWK LEHV >Mature_244_residues MQLTFSILSWGAWAPQYQHPQSWQTWCKNSAELNLDTPQSDTIAPALKHVPAMQRRRFSRLTKMMLEVSFQCEMPANCRS IFASRHGELQRTIGLLEDIIAKQPLSPLGFSQSVHNTASGIFGIVAANTAPSTSVAAGTETLSQAMVEAFAQLHQSPEPL LLVFGDDPVPPVYDEFTQEFELPLALGLQLAPFDAPASVKLTVSRISESTALNPLTYGALLHALATAQNISGCLSQWHWK LEHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26780; Mature: 26780
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTFSILSWGAWAPQYQHPQSWQTWCKNSAELNLDTPQSDTIAPALKHVPAMQRRRFSR CEEEEEEHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHCHHHHHHHHHH LTKMMLEVSFQCEMPANCRSIFASRHGELQRTIGLLEDIIAKQPLSPLGFSQSVHNTASG HHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IFGIVAANTAPSTSVAAGTETLSQAMVEAFAQLHQSPEPLLLVFGDDPVPPVYDEFTQEF HEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH ELPLALGLQLAPFDAPASVKLTVSRISESTALNPLTYGALLHALATAQNISGCLSQWHWK CCHHHHCCEECCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEHV HCCC >Mature Secondary Structure MQLTFSILSWGAWAPQYQHPQSWQTWCKNSAELNLDTPQSDTIAPALKHVPAMQRRRFSR CEEEEEEHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHCHHHHHHHHHH LTKMMLEVSFQCEMPANCRSIFASRHGELQRTIGLLEDIIAKQPLSPLGFSQSVHNTASG HHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IFGIVAANTAPSTSVAAGTETLSQAMVEAFAQLHQSPEPLLLVFGDDPVPPVYDEFTQEF HEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH ELPLALGLQLAPFDAPASVKLTVSRISESTALNPLTYGALLHALATAQNISGCLSQWHWK CCHHHHCCEECCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEHV HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA