| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160873469
Identifier: 160873469
GI number: 160873469
Start: 391851
End: 393215
Strand: Reverse
Name: 160873469
Synonym: Sbal195_0344
Alternate gene names: NA
Gene position: 393215-391851 (Counterclockwise)
Preceding gene: 160873470
Following gene: 160873468
Centisome position: 7.35
GC content: 50.48
Gene sequence:
>1365_bases ATGACACAGCTACTCAAAAACTGGTTAACCCAAGGGCCATTTGCCCAACAACTGATCAGCTTTAATCACCACGACATAGT CACAGGTGCATTATTTACCAATCAGGTGGCGTATTTTTACGAGCAACTGCTCGTCGCTCCCGAGAAAAAATGGCTGCTCG CGAGTGATACCAGCGATCTGTTTGCCGTTGGATTATGTGCCGCGCTGTTAGCGGGCAAAGAAATTATCCTGCCTCCCAAC ACCCAAACCGGCACCTTGAGCGAGTTAACGCACCAGTTTGATGGCATATTGTCAGACAAGCCTTTGTGCGAATGCCAAGC TTTTGTGCTGCTGAAAAAGGAACTGAGCCTGCCCAACAAACCTTGGCCCGCGAGCGAGGCTATCGGCGAGTTAGTGCTAT TTACCTCTGGCAGCAGCGGCGAACCTAAGGCGATCCGTAAAACACTTGAACAGTTAGATGTCGAAGTGTCTGTACTCGAA CATACTTTTGCCGAGCATTTGCCCCATTGCAGTGTGGTATCCACGGTTTCCCACCAGCATATTTACGGTCTATTATTCAA GATTTTGTGGCCGCTCGCCGCCAGTCGACCGTTTTTAAGCGAGCAGATTGAATACCCAGAAACCCTAAGTTATTACACTG CCTTGCTGCCAAACCTATGTTTGATCAGTAGCCCAGCCCAGTTATCGCGCCTGCCTAAAGCGCTAGAGCACGAGCGGCAA CTGCGCTCACCGAGCTTAGTGTTTAGCTCTGGCGGGCCATTAAGTTTTGCCGCAGCCAAGGGCGTCAACCAGTGCTATGG TCACTTACCCATCGAAATTTTTGGTAGTACAGAAACCGGTGGCATCGCCTATCGCCGTCAGCATGAGACCGATGAACCTT GGCAAGTGTTTGACCGCATCTCAATAGATCAAGATCCTAGCGACGGCGCCCTGCTGCTGAAATCGCCCTATTTGGCCGAC GATGAATGGCTACGCTGCGAAGATAAAATCGAACCAACCGAGAATGGCCAGTTTAGGCTCAAAGGCCGACTCGATCGCAT CGTTAAGATTGAAGAGAAGCGCCTGTCGCTCGCGCAAATGGAAACCCTCATGTGCAGCCACGCCTACGTTGAGCAAGCCG CTCTGGTAGTGCTGCCACAGTTTAAATCCCAACTTGGCGCAGTGGTGACCTTGTCAGAACTCGGTAAAAACGTGCTGCAA GAACAGGGTAAACTCAGTATTAACAATGCCCTAAAAGCACATTTACTGACCCAATTTGAGCGCGTCACGCTGCCACGCCG CTGGCGTTATCCGGATATTTTACCGCTTAACACTCAGGGTAAGCGTGTCACTGCCCAGTTAGTCGAGTTATTTGATCATG ATTAA
Upstream 100 bases:
>100_bases TAGCAACCTGGACCTTGTATAACGGTTTGATTGCATACGTACTCATGGGACTGCTCCTCGGTGGGGAATGGTTATATCGC AGCTTTTGGTTGAAGAAAAC
Downstream 100 bases:
>100_bases ATCGAGTTTACCGCCGATCCTGCATTCCGATATCGGCATTGATAACATTGAATTACGTCTGTTAGTGGCGGCCGACCTTG AGTATTTTAACGGCCATTTT
Product: aconitate hydratase
Products: NA
Alternate protein names: CoA Ligase; AMP-Ligase; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase; Acyl-Co A Synthetase; AMP-(Fatty) Acid Ligase; Acyl-Co A Synthetases/AMP-(Fatty) Acid Ligases-Like Protein; Peptide Synthase; Trigger Factor; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase Related Enzyme; Amp-Dependent Synthetase Or Ligase Protein; 3-Phosphoshikimate 1-Carboxyvinyltransferase; Amp-Dependent Synthetase And Ligase Family Protein; AMP-(Fatty)Acid Ligase; Acyl-Co A Synthetases/AMP-(Fatty) Acid Ligase; Acyl-CoA Synthetase; Surfactin Synthetase; Acyl-Co A Synthetase-Related Protein; Aconitate Hydratase; 4-Coumarate-CoA Ligase; Fatty Acid Degradation; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase-Like; AMP-(Fatty)Acid Ligases; Fatty Acid CoA Ligase; Acetyl-Co A Synthetase
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTQLLKNWLTQGPFAQQLISFNHHDIVTGALFTNQVAYFYEQLLVAPEKKWLLASDTSDLFAVGLCAALLAGKEIILPPN TQTGTLSELTHQFDGILSDKPLCECQAFVLLKKELSLPNKPWPASEAIGELVLFTSGSSGEPKAIRKTLEQLDVEVSVLE HTFAEHLPHCSVVSTVSHQHIYGLLFKILWPLAASRPFLSEQIEYPETLSYYTALLPNLCLISSPAQLSRLPKALEHERQ LRSPSLVFSSGGPLSFAAAKGVNQCYGHLPIEIFGSTETGGIAYRRQHETDEPWQVFDRISIDQDPSDGALLLKSPYLAD DEWLRCEDKIEPTENGQFRLKGRLDRIVKIEEKRLSLAQMETLMCSHAYVEQAALVVLPQFKSQLGAVVTLSELGKNVLQ EQGKLSINNALKAHLLTQFERVTLPRRWRYPDILPLNTQGKRVTAQLVELFDHD
Sequences:
>Translated_454_residues MTQLLKNWLTQGPFAQQLISFNHHDIVTGALFTNQVAYFYEQLLVAPEKKWLLASDTSDLFAVGLCAALLAGKEIILPPN TQTGTLSELTHQFDGILSDKPLCECQAFVLLKKELSLPNKPWPASEAIGELVLFTSGSSGEPKAIRKTLEQLDVEVSVLE HTFAEHLPHCSVVSTVSHQHIYGLLFKILWPLAASRPFLSEQIEYPETLSYYTALLPNLCLISSPAQLSRLPKALEHERQ LRSPSLVFSSGGPLSFAAAKGVNQCYGHLPIEIFGSTETGGIAYRRQHETDEPWQVFDRISIDQDPSDGALLLKSPYLAD DEWLRCEDKIEPTENGQFRLKGRLDRIVKIEEKRLSLAQMETLMCSHAYVEQAALVVLPQFKSQLGAVVTLSELGKNVLQ EQGKLSINNALKAHLLTQFERVTLPRRWRYPDILPLNTQGKRVTAQLVELFDHD >Mature_453_residues TQLLKNWLTQGPFAQQLISFNHHDIVTGALFTNQVAYFYEQLLVAPEKKWLLASDTSDLFAVGLCAALLAGKEIILPPNT QTGTLSELTHQFDGILSDKPLCECQAFVLLKKELSLPNKPWPASEAIGELVLFTSGSSGEPKAIRKTLEQLDVEVSVLEH TFAEHLPHCSVVSTVSHQHIYGLLFKILWPLAASRPFLSEQIEYPETLSYYTALLPNLCLISSPAQLSRLPKALEHERQL RSPSLVFSSGGPLSFAAAKGVNQCYGHLPIEIFGSTETGGIAYRRQHETDEPWQVFDRISIDQDPSDGALLLKSPYLADD EWLRCEDKIEPTENGQFRLKGRLDRIVKIEEKRLSLAQMETLMCSHAYVEQAALVVLPQFKSQLGAVVTLSELGKNVLQE QGKLSINNALKAHLLTQFERVTLPRRWRYPDILPLNTQGKRVTAQLVELFDHD
Specific function: Unknown
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50831; Mature: 50700
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLLKNWLTQGPFAQQLISFNHHDIVTGALFTNQVAYFYEQLLVAPEKKWLLASDTSDL CHHHHHHHHCCCHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH FAVGLCAALLAGKEIILPPNTQTGTLSELTHQFDGILSDKPLCECQAFVLLKKELSLPNK HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC PWPASEAIGELVLFTSGSSGEPKAIRKTLEQLDVEVSVLEHTFAEHLPHCSVVSTVSHQH CCCHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH IYGLLFKILWPLAASRPFLSEQIEYPETLSYYTALLPNLCLISSPAQLSRLPKALEHERQ HHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHH LRSPSLVFSSGGPLSFAAAKGVNQCYGHLPIEIFGSTETGGIAYRRQHETDEPWQVFDRI HCCCCEEEECCCCEEHHHHHCHHHHHCCCCEEEECCCCCCCEEEECCCCCCCHHHHHHHC SIDQDPSDGALLLKSPYLADDEWLRCEDKIEPTENGQFRLKGRLDRIVKIEEKRLSLAQM CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH ETLMCSHAYVEQAALVVLPQFKSQLGAVVTLSELGKNVLQEQGKLSINNALKAHLLTQFE HHHHHHHHHHHHHHHEEEHHHHHHHHHEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHH RVTLPRRWRYPDILPLNTQGKRVTAQLVELFDHD HHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TQLLKNWLTQGPFAQQLISFNHHDIVTGALFTNQVAYFYEQLLVAPEKKWLLASDTSDL HHHHHHHHCCCHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH FAVGLCAALLAGKEIILPPNTQTGTLSELTHQFDGILSDKPLCECQAFVLLKKELSLPNK HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC PWPASEAIGELVLFTSGSSGEPKAIRKTLEQLDVEVSVLEHTFAEHLPHCSVVSTVSHQH CCCHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH IYGLLFKILWPLAASRPFLSEQIEYPETLSYYTALLPNLCLISSPAQLSRLPKALEHERQ HHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHH LRSPSLVFSSGGPLSFAAAKGVNQCYGHLPIEIFGSTETGGIAYRRQHETDEPWQVFDRI HCCCCEEEECCCCEEHHHHHCHHHHHCCCCEEEECCCCCCCEEEECCCCCCCHHHHHHHC SIDQDPSDGALLLKSPYLADDEWLRCEDKIEPTENGQFRLKGRLDRIVKIEEKRLSLAQM CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH ETLMCSHAYVEQAALVVLPQFKSQLGAVVTLSELGKNVLQEQGKLSINNALKAHLLTQFE HHHHHHHHHHHHHHHEEEHHHHHHHHHEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHH RVTLPRRWRYPDILPLNTQGKRVTAQLVELFDHD HHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA