| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873467
Identifier: 160873467
GI number: 160873467
Start: 389601
End: 391460
Strand: Reverse
Name: 160873467
Synonym: Sbal195_0342
Alternate gene names: NA
Gene position: 391460-389601 (Counterclockwise)
Preceding gene: 160873468
Following gene: 160873466
Centisome position: 7.32
GC content: 51.02
Gene sequence:
>1860_bases GTGCTAACGCCTCCCAGCGACCTCGTTGAGTCGGCGCCCATTAAGCTCGCCTTAGTGATCCCCAATTACAATCACAGCGC CGCGATTGCCCAGACCTTGGCCGATCTTGCCCAGTTTAATCTGCCCTGTTATTTAATTGATGATGGCAGCAATGACGAAA CCCGTTATCTACTGCAATCCTTAGCCCAAACCTATCCTTGGGTGACTTTACTGCTGCATCCGTACAATCGTGGTAAGGGC GCCGCTGTGATGACAGGGCTGCGCCGTGCCTACCGCGATGGCTTTAGCCATGCACTGCAGGTCGATGCCGATGGTCAACA TAATCTCGCTGATATTCCGGCTATGTTAGCAAGGGCACAAGCTAAACCCGATGCGCTGATTTCGGGTAAGCCTGAGTACG ATGAATCCGTGCCTAAGGGCAGGCTTTATGGCCGCTACTTAACCCATTTTTGGGTATGGGTCGAAACCTTAAGCTTTGAT ATTCAAGATTCTATGTGTGGCTTTCGTGTTTATCCGCTGGCCGCCACTGAGCGATTACTGTGCCAGCAAGCCTTAACGGA GCGAATGGATTTTGATATCGAAATCCTGGTTAAACTCTACTGGCAAGGGGTGGAGATTCTATTCCAGCCGACTAAGGTGA TTTATCCCGAAGGCGGCGTCAGTCACTTTCAAGGTGTGGCCGATAATGTCCGCATCACTAAGCTGCACACACGACTGTTT TTCGGCATGCTCAAACGCCTGCCTTGGCTATTGAAGCGTAAATCGCAGCAACAAGCCGTGCAAACTTCCGATTGCTCGTC AGCAACACAATCGACTTCAGCCACCCATTGGTCGGGCATGAAGGAGCGCGGCAGTTACTGGGGCATCAAACTGTTAGCCG AGAGCTATCGCTTTGGCGGCCATTGGTTGTGCCGCGCCATTATGTATCCGGTGATTTGCTATTTTTTCCTCACAGGCAAA GTCACCCGTGAAGCCTCGTTAGATTTTCTGCGCCGCGTGCAAAAACTTGAGCCGCAACACCCTAAGCTCAATCAGCCTGT AGGCTGGCGCGATAGCCTGAATCACTTTTTAGCCTTTGGCAATGCCGCACTCGATAGAATCGATGCCTGGTGCGATCGTA TCCAATTGAGCCAAGTGGATTTCCCCGACCGCCAAGTGCTGGCCGAACAGCTCGAAAGCGGCAAAGGCGCGGTGTTATTA GTGTCGCACCTGGGTAATTTAGAACTTTGCCGCGCCATTTCAATCCACCAGCGCAAAGTCAAAGTAAACGTCATGGTGCT AACTAGCCATGCGGAAAACTTCAATAAGGTGCTCAAACAGTTAAACCCAGATAGCACGCTCAATCTTATTCAAGTGACCG AGCTAAATCCTGCAACGTCTATGCTGTTACAGCAAAAAATTGAGGACGGTGAACTGGTGGTGATTGCGGGGGATAGAACC TCATCGAATACCCAAGGCCGCGTCATGTATGCGCCGTTTATGGGCCAAGATGCCGCGTTTCCACAAGGGCCGTTTATTTT GGCGGGCTTACTCGATTGCCCAGTGTTTTTAATGTTTTGCCTGCGGGAACAAGGGCGTTATCGGGTGCATTTAGAACGCT TCGCCGAAACACTGAAAGGCCCAAGAGCGGGCAGAATGGACAGATTACAGCAGGCCGTGAACCGCTACAGCGAACGTTTA GAATACTTTGCCAGACGCGAGCCTTTGCAATGGTTTAACTTCTTCGATTTTTGGCGCAAAGACAGCGAGCTACAACGCAC CCCATCGCATTTAGTACAGCCTAATCCGTTACCGACAACTTCAGCATCATCGCCGATCCCAGAGCAGGATCATAAGACAG ACAGGACACAGCATTCATGA
Upstream 100 bases:
>100_bases ATAATGATGGTGAAAACCGTTACGCTTCAGGCCGTATCGCCTTTGATAGCACGCCCGTTAACAGCAAATCTGCTACCAAC AATGGCGATGAGGCAAGTCC
Downstream 100 bases:
>100_bases GCCACACCAAAGCAGCCGACTCCGAGAGTCAATCAGACCTACAGACTGTTGAGTTCGGCCGTCAGTTTCTCACCTTAGAA CAAGTGGTTGCCGTCGCCAA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Lipid A Biosynthesis Acyltransferase; Acyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Glycosyl Transferase Group 2 Family; Dolichyl-Phosphate Mannose Synthase; Family 2 Glycosyl Transferase; Dolichol-Phosphate Mannosyltransferase; Transmembrane Family-2 Glycosyl Transferase; Acetyltransferase; Dolichyl-Phosphate Mannose Synthase Related Protein; B-Glycosyltransferase Glycosyltransferase Family 2 Protein; Glycosyl Transferase Family 2 And Acyltransferase Domains; Glycosyltransferases; Glycosyl Transferase GT2 Family; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyl Transferase Family 2 Protein; Acyltransferase-Like Protein; Lipid A Biosynthesis Acyltransferase Family; Bacterial Lipid A Biosynthesis Acyltransferase Family; Dolichol-Phosphate Mannose Synthase; Oligosaccharide Acyltransferase Family Protein; B-Glycosyltransferase; Glycosyltransferase-Like Protein; Bifunctional Glycosyl Transferase/Acyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Gt2J; Dolichyl-Phosphate Mannose Synthase-Like Protein; XanthomoNADin Biosynthesis Acyltransferase Protein; Glycosyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MLTPPSDLVESAPIKLALVIPNYNHSAAIAQTLADLAQFNLPCYLIDDGSNDETRYLLQSLAQTYPWVTLLLHPYNRGKG AAVMTGLRRAYRDGFSHALQVDADGQHNLADIPAMLARAQAKPDALISGKPEYDESVPKGRLYGRYLTHFWVWVETLSFD IQDSMCGFRVYPLAATERLLCQQALTERMDFDIEILVKLYWQGVEILFQPTKVIYPEGGVSHFQGVADNVRITKLHTRLF FGMLKRLPWLLKRKSQQQAVQTSDCSSATQSTSATHWSGMKERGSYWGIKLLAESYRFGGHWLCRAIMYPVICYFFLTGK VTREASLDFLRRVQKLEPQHPKLNQPVGWRDSLNHFLAFGNAALDRIDAWCDRIQLSQVDFPDRQVLAEQLESGKGAVLL VSHLGNLELCRAISIHQRKVKVNVMVLTSHAENFNKVLKQLNPDSTLNLIQVTELNPATSMLLQQKIEDGELVVIAGDRT SSNTQGRVMYAPFMGQDAAFPQGPFILAGLLDCPVFLMFCLREQGRYRVHLERFAETLKGPRAGRMDRLQQAVNRYSERL EYFARREPLQWFNFFDFWRKDSELQRTPSHLVQPNPLPTTSASSPIPEQDHKTDRTQHS
Sequences:
>Translated_619_residues MLTPPSDLVESAPIKLALVIPNYNHSAAIAQTLADLAQFNLPCYLIDDGSNDETRYLLQSLAQTYPWVTLLLHPYNRGKG AAVMTGLRRAYRDGFSHALQVDADGQHNLADIPAMLARAQAKPDALISGKPEYDESVPKGRLYGRYLTHFWVWVETLSFD IQDSMCGFRVYPLAATERLLCQQALTERMDFDIEILVKLYWQGVEILFQPTKVIYPEGGVSHFQGVADNVRITKLHTRLF FGMLKRLPWLLKRKSQQQAVQTSDCSSATQSTSATHWSGMKERGSYWGIKLLAESYRFGGHWLCRAIMYPVICYFFLTGK VTREASLDFLRRVQKLEPQHPKLNQPVGWRDSLNHFLAFGNAALDRIDAWCDRIQLSQVDFPDRQVLAEQLESGKGAVLL VSHLGNLELCRAISIHQRKVKVNVMVLTSHAENFNKVLKQLNPDSTLNLIQVTELNPATSMLLQQKIEDGELVVIAGDRT SSNTQGRVMYAPFMGQDAAFPQGPFILAGLLDCPVFLMFCLREQGRYRVHLERFAETLKGPRAGRMDRLQQAVNRYSERL EYFARREPLQWFNFFDFWRKDSELQRTPSHLVQPNPLPTTSASSPIPEQDHKTDRTQHS >Mature_619_residues MLTPPSDLVESAPIKLALVIPNYNHSAAIAQTLADLAQFNLPCYLIDDGSNDETRYLLQSLAQTYPWVTLLLHPYNRGKG AAVMTGLRRAYRDGFSHALQVDADGQHNLADIPAMLARAQAKPDALISGKPEYDESVPKGRLYGRYLTHFWVWVETLSFD IQDSMCGFRVYPLAATERLLCQQALTERMDFDIEILVKLYWQGVEILFQPTKVIYPEGGVSHFQGVADNVRITKLHTRLF FGMLKRLPWLLKRKSQQQAVQTSDCSSATQSTSATHWSGMKERGSYWGIKLLAESYRFGGHWLCRAIMYPVICYFFLTGK VTREASLDFLRRVQKLEPQHPKLNQPVGWRDSLNHFLAFGNAALDRIDAWCDRIQLSQVDFPDRQVLAEQLESGKGAVLL VSHLGNLELCRAISIHQRKVKVNVMVLTSHAENFNKVLKQLNPDSTLNLIQVTELNPATSMLLQQKIEDGELVVIAGDRT SSNTQGRVMYAPFMGQDAAFPQGPFILAGLLDCPVFLMFCLREQGRYRVHLERFAETLKGPRAGRMDRLQQAVNRYSERL EYFARREPLQWFNFFDFWRKDSELQRTPSHLVQPNPLPTTSASSPIPEQDHKTDRTQHS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70487; Mature: 70487
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTPPSDLVESAPIKLALVIPNYNHSAAIAQTLADLAQFNLPCYLIDDGSNDETRYLLQS CCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH LAQTYPWVTLLLHPYNRGKGAAVMTGLRRAYRDGFSHALQVDADGQHNLADIPAMLARAQ HHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHC AKPDALISGKPEYDESVPKGRLYGRYLTHFWVWVETLSFDIQDSMCGFRVYPLAATERLL CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH CQQALTERMDFDIEILVKLYWQGVEILFQPTKVIYPEGGVSHFQGVADNVRITKLHTRLF HHHHHHHHCCCCHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHCCCCEEEEHHHHHHH FGMLKRLPWLLKRKSQQQAVQTSDCSSATQSTSATHWSGMKERGSYWGIKLLAESYRFGG HHHHHHCHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCHHHCCCHHHHHHHHHHHCCCH HWLCRAIMYPVICYFFLTGKVTREASLDFLRRVQKLEPQHPKLNQPVGWRDSLNHFLAFG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH NAALDRIDAWCDRIQLSQVDFPDRQVLAEQLESGKGAVLLVSHLGNLELCRAISIHQRKV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHEEE KVNVMVLTSHAENFNKVLKQLNPDSTLNLIQVTELNPATSMLLQQKIEDGELVVIAGDRT EEEEEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCC SSNTQGRVMYAPFMGQDAAFPQGPFILAGLLDCPVFLMFCLREQGRYRVHLERFAETLKG CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCC PRAGRMDRLQQAVNRYSERLEYFARREPLQWFNFFDFWRKDSELQRTPSHLVQPNPLPTT CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCC SASSPIPEQDHKTDRTQHS CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTPPSDLVESAPIKLALVIPNYNHSAAIAQTLADLAQFNLPCYLIDDGSNDETRYLLQS CCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH LAQTYPWVTLLLHPYNRGKGAAVMTGLRRAYRDGFSHALQVDADGQHNLADIPAMLARAQ HHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHC AKPDALISGKPEYDESVPKGRLYGRYLTHFWVWVETLSFDIQDSMCGFRVYPLAATERLL CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH CQQALTERMDFDIEILVKLYWQGVEILFQPTKVIYPEGGVSHFQGVADNVRITKLHTRLF HHHHHHHHCCCCHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHCCCCEEEEHHHHHHH FGMLKRLPWLLKRKSQQQAVQTSDCSSATQSTSATHWSGMKERGSYWGIKLLAESYRFGG HHHHHHCHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCHHHCCCHHHHHHHHHHHCCCH HWLCRAIMYPVICYFFLTGKVTREASLDFLRRVQKLEPQHPKLNQPVGWRDSLNHFLAFG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH NAALDRIDAWCDRIQLSQVDFPDRQVLAEQLESGKGAVLLVSHLGNLELCRAISIHQRKV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHEEE KVNVMVLTSHAENFNKVLKQLNPDSTLNLIQVTELNPATSMLLQQKIEDGELVVIAGDRT EEEEEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCC SSNTQGRVMYAPFMGQDAAFPQGPFILAGLLDCPVFLMFCLREQGRYRVHLERFAETLKG CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCC PRAGRMDRLQQAVNRYSERLEYFARREPLQWFNFFDFWRKDSELQRTPSHLVQPNPLPTT CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCC SASSPIPEQDHKTDRTQHS CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA