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The map label for this gene is hlyB [H]

Identifier: 160873409

GI number: 160873409

Start: 323190

End: 325106

Strand: Reverse

Name: hlyB [H]

Synonym: Sbal195_0283

Alternate gene names: 160873409

Gene position: 325106-323190 (Counterclockwise)

Preceding gene: 160873410

Following gene: 160873404

Centisome position: 6.08

GC content: 49.03

Gene sequence:

>1917_bases
ATGATATTTAATAACCTCACCATTAAGCAGAAAATTCTGCTAACAGTGACATTTGCAGTACTGCTGTCGACCATACTCGT
CGGCGTATTAAGCCAACGTAGCGCTAAAAATGTCGTACAACAACGGATGTTAGGTTCGGAACTGCCGAGTTTGATGATGC
AGATCCGCAATAAGATCGATCTCGACATCTCCACTTTAATGAATGCTGCAGAGCAATTGGCCAGCAGCCGCATGTTACTG
CAATGGCTCGAAGACGGCAGACCACAGGCCCAAGAAACCCAAGTGGTTGCCCAACTGAAAGACATCACGCGTCAATATAA
GCTAGCGCAAGCCTCCTACGCCGACAGACAAACTGCCGCCTACTACACTCAGGATGGATTTTTGCGCGTGCTAACCCCAG
CGCAGGATGGCTGGTTTTTTGGTTACCGCGACAGTGGCCAAGAACGTATGTTAAACGTATTCACTGAGGCCAACGGCGAA
GTCAAACTCTTCATCAACTACCAGCAACCCAATGGTCGCGGCTTAGTCGGGCTAGCTAAATCACTCGATGATATGGTGCG
TTTACTGAGTTCATTTAAGATTGAAGAAACAGGATTTGTTTACTTAGTGGATGCCAAGGGTGAAGTGAAACTCCACCCAG
ATACGAGCCAAATTGGTAAGAGCAACCTAAGCAACTTATACAAAGATGCGAACTCAAGCGCCTTACTAAACCGCGGTGAT
TTCAATCTGATCAATACCAAGATCAATGGCGAAAACATGCTGGTTGCCAGTAGTTATATCGCATCTATGGATTGGTACTT
AGTGGCACAAGTGCCAGAAGCCGAAGTGTTTGCGCTATTAACCGAAGCGGCTTATCAGATCTTAATCTGGACACTGTTGA
TTGCAGCGGGCTTTATCGTTCTCGCTATCGTTGTTGCAGGTTCTGTGAGTCGTCCCATCGCCCAAGTTGCCGCTATGTTC
CGCGACATAGGCGAAGGTGAAGGTGACTTACGCCAACGCTTACCCGTCAATGGTGAAGATGAGATTGCGCAACTCGCTAA
GGGATTTAACAGCTTTATCAGCAAGATCCAAGATTCGGTCATCGAAGTGGCGCAAACCAGCGAACAGCTCGGTTTCTCCG
CTAAGGATGTGTCGAATCAGGCACAGCAAACCTTAGAAGACAGCCACGAGCAGAAAGATCGCACTATGATGGTGGTAACA
GCCATTAATGAAATGGGCGCGACGGTTAACGAAATTGCCAGCAATGCCGCTCAAGCTGCGGTTGCAGCAAGAGATGCTGA
CACTGAAGCCAGCAGCGGCCAAGTTGTGGTAACCCGTGCCCGCGATACCATTAACCAATTGTCGAAGGACGTTGGCCAAG
TAGGTGAAGTGATTGAGTCCCTCGCGACCCACACTAAATCCATTGGTGGGATTTTAGATGTGATCCGCGCTATCTCTGAA
CAGACAAACTTGTTAGCCCTCAACGCGGCAATTGAAGCGGCACGTGCCGGTGAAGCTGGACGCGGTTTTGCTGTCGTCGC
CGATGAAGTACGTAACTTAGCATCACGTACCGCAGCTTCGACCAATGAAGTGCAAGGCATGATCGACAAGTTGCAATCGG
AAGCCAGCCGCGCAGTGAATGCGATGGCCCAGAGTCGTACTCGCTCCCATGAAGGTGTTGTGGCCGTCGATGAAGCCAGC
AAATCGTTGATTGGTATTAGCGATCGCATTGGTCTTATCAGCGACATGAACATCCAAGTTGCTGCGGCAACGGAAGAACA
ATCCACAGTTGTGGAGGACATCAACCGTAACGTCACAGAAATCAACGATATTACTCAGCGTACAGCCAATACTGCACAAG
CGGCAGCACAGGCGAGTTTAGCCTTGAATCAACTGTCACACCGTTTAGATACCTTAGTGGCCAAGTTTAAGGTGTAA

Upstream 100 bases:

>100_bases
CTAAGGTTAACTTTTCACATTCCTGTCCGATAATCTTTTACCGTACAAGAGTGCGTTGACCGATAACGCAAAACAGTCCA
ACACAGGCATATTGATATTT

Downstream 100 bases:

>100_bases
AACCTTAAACTTACACCATAAAAAAACGCCTTAGATGGAAACATCTAAGGCGTTTTTCTTTAATTCAAAGAGGCGATCAA
TCCATAGCAATAAATTTAAT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MIFNNLTIKQKILLTVTFAVLLSTILVGVLSQRSAKNVVQQRMLGSELPSLMMQIRNKIDLDISTLMNAAEQLASSRMLL
QWLEDGRPQAQETQVVAQLKDITRQYKLAQASYADRQTAAYYTQDGFLRVLTPAQDGWFFGYRDSGQERMLNVFTEANGE
VKLFINYQQPNGRGLVGLAKSLDDMVRLLSSFKIEETGFVYLVDAKGEVKLHPDTSQIGKSNLSNLYKDANSSALLNRGD
FNLINTKINGENMLVASSYIASMDWYLVAQVPEAEVFALLTEAAYQILIWTLLIAAGFIVLAIVVAGSVSRPIAQVAAMF
RDIGEGEGDLRQRLPVNGEDEIAQLAKGFNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVVT
AINEMGATVNEIASNAAQAAVAARDADTEASSGQVVVTRARDTINQLSKDVGQVGEVIESLATHTKSIGGILDVIRAISE
QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMIDKLQSEASRAVNAMAQSRTRSHEGVVAVDEAS
KSLIGISDRIGLISDMNIQVAAATEEQSTVVEDINRNVTEINDITQRTANTAQAAAQASLALNQLSHRLDTLVAKFKV

Sequences:

>Translated_638_residues
MIFNNLTIKQKILLTVTFAVLLSTILVGVLSQRSAKNVVQQRMLGSELPSLMMQIRNKIDLDISTLMNAAEQLASSRMLL
QWLEDGRPQAQETQVVAQLKDITRQYKLAQASYADRQTAAYYTQDGFLRVLTPAQDGWFFGYRDSGQERMLNVFTEANGE
VKLFINYQQPNGRGLVGLAKSLDDMVRLLSSFKIEETGFVYLVDAKGEVKLHPDTSQIGKSNLSNLYKDANSSALLNRGD
FNLINTKINGENMLVASSYIASMDWYLVAQVPEAEVFALLTEAAYQILIWTLLIAAGFIVLAIVVAGSVSRPIAQVAAMF
RDIGEGEGDLRQRLPVNGEDEIAQLAKGFNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVVT
AINEMGATVNEIASNAAQAAVAARDADTEASSGQVVVTRARDTINQLSKDVGQVGEVIESLATHTKSIGGILDVIRAISE
QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMIDKLQSEASRAVNAMAQSRTRSHEGVVAVDEAS
KSLIGISDRIGLISDMNIQVAAATEEQSTVVEDINRNVTEINDITQRTANTAQAAAQASLALNQLSHRLDTLVAKFKV
>Mature_638_residues
MIFNNLTIKQKILLTVTFAVLLSTILVGVLSQRSAKNVVQQRMLGSELPSLMMQIRNKIDLDISTLMNAAEQLASSRMLL
QWLEDGRPQAQETQVVAQLKDITRQYKLAQASYADRQTAAYYTQDGFLRVLTPAQDGWFFGYRDSGQERMLNVFTEANGE
VKLFINYQQPNGRGLVGLAKSLDDMVRLLSSFKIEETGFVYLVDAKGEVKLHPDTSQIGKSNLSNLYKDANSSALLNRGD
FNLINTKINGENMLVASSYIASMDWYLVAQVPEAEVFALLTEAAYQILIWTLLIAAGFIVLAIVVAGSVSRPIAQVAAMF
RDIGEGEGDLRQRLPVNGEDEIAQLAKGFNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVVT
AINEMGATVNEIASNAAQAAVAARDADTEASSGQVVVTRARDTINQLSKDVGQVGEVIESLATHTKSIGGILDVIRAISE
QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMIDKLQSEASRAVNAMAQSRTRSHEGVVAVDEAS
KSLIGISDRIGLISDMNIQVAAATEEQSTVVEDINRNVTEINDITQRTANTAQAAAQASLALNQLSHRLDTLVAKFKV

Specific function: May form a pore through which the hemolysin can be exported [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=361, Percent_Identity=29.9168975069252, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1788195, Length=327, Percent_Identity=31.4984709480122, Blast_Score=129, Evalue=6e-31,
Organism=Escherichia coli, GI1787690, Length=351, Percent_Identity=30.7692307692308, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI2367378, Length=362, Percent_Identity=29.5580110497238, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1789453, Length=384, Percent_Identity=28.3854166666667, Blast_Score=117, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 69209; Mature: 69209

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNNLTIKQKILLTVTFAVLLSTILVGVLSQRSAKNVVQQRMLGSELPSLMMQIRNKID
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDISTLMNAAEQLASSRMLLQWLEDGRPQAQETQVVAQLKDITRQYKLAQASYADRQTAA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
YYTQDGFLRVLTPAQDGWFFGYRDSGQERMLNVFTEANGEVKLFINYQQPNGRGLVGLAK
EEECCCCEEEEECCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHH
SLDDMVRLLSSFKIEETGFVYLVDAKGEVKLHPDTSQIGKSNLSNLYKDANSSALLNRGD
HHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEECCC
FNLINTKINGENMLVASSYIASMDWYLVAQVPEAEVFALLTEAAYQILIWTLLIAAGFIV
CEEEEEEECCCCEEEEHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAIVVAGSVSRPIAQVAAMFRDIGEGEGDLRQRLPVNGEDEIAQLAKGFNSFISKIQDSV
HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVVTAINEMGATVNEIASNAAQAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHCCHHHHHHHHHHHHH
VAARDADTEASSGQVVVTRARDTINQLSKDVGQVGEVIESLATHTKSIGGILDVIRAISE
HHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMIDKLQSEASRAVN
CCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AMAQSRTRSHEGVVAVDEASKSLIGISDRIGLISDMNIQVAAATEEQSTVVEDINRNVTE
HHHHHHCCCCCCEEEEECCCCHHCCCHHCCCCEECCCEEEEECCCHHHHHHHHHCCCHHH
INDITQRTANTAQAAAQASLALNQLSHRLDTLVAKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFNNLTIKQKILLTVTFAVLLSTILVGVLSQRSAKNVVQQRMLGSELPSLMMQIRNKID
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDISTLMNAAEQLASSRMLLQWLEDGRPQAQETQVVAQLKDITRQYKLAQASYADRQTAA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
YYTQDGFLRVLTPAQDGWFFGYRDSGQERMLNVFTEANGEVKLFINYQQPNGRGLVGLAK
EEECCCCEEEEECCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHH
SLDDMVRLLSSFKIEETGFVYLVDAKGEVKLHPDTSQIGKSNLSNLYKDANSSALLNRGD
HHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEECCC
FNLINTKINGENMLVASSYIASMDWYLVAQVPEAEVFALLTEAAYQILIWTLLIAAGFIV
CEEEEEEECCCCEEEEHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAIVVAGSVSRPIAQVAAMFRDIGEGEGDLRQRLPVNGEDEIAQLAKGFNSFISKIQDSV
HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVVTAINEMGATVNEIASNAAQAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHCCHHHHHHHHHHHHH
VAARDADTEASSGQVVVTRARDTINQLSKDVGQVGEVIESLATHTKSIGGILDVIRAISE
HHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMIDKLQSEASRAVN
CCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AMAQSRTRSHEGVVAVDEASKSLIGISDRIGLISDMNIQVAAATEEQSTVVEDINRNVTE
HHHHHHCCCCCCEEEEECCCCHHCCCHHCCCCEECCCEEEEECCCHHHHHHHHHCCCHHH
INDITQRTANTAQAAAQASLALNQLSHRLDTLVAKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2162464; 10952301 [H]