| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873402
Identifier: 160873402
GI number: 160873402
Start: 317157
End: 318140
Strand: Direct
Name: 160873402
Synonym: Sbal195_0276
Alternate gene names: NA
Gene position: 317157-318140 (Clockwise)
Preceding gene: 160873400
Following gene: 160873403
Centisome position: 5.93
GC content: 40.04
Gene sequence:
>984_bases ATGCAGCAGCTATTTTTTCGATTACTAGAAGACCGTTATTTTAATCGGTTGCCCGAGGAGTGGGTTCTCCGGTCAGCTCA GGAATCGGTTGATTTCGTTAGATTTTGGCTTGTACATTGCTTTCGCAGTGCCGCATCGGAACGAGAATTAGCAACTGTGC TGTTTTTTGCCGCTAAATGGAAGTTAGAAGAGCTAACTTTCTTAAGATCATTTTGGCAAAGTTATACGTCAGTTATGGAT GAAGCTGCAGAGTTGACATTGAGGAATTTATATTTCCAGTTAATTCCTCAAATTAATCTTGATCACGACAATCATTTAGA TGCGATAGCCATTTTTTCTTTTGTACTCAAGTTTGAACAACAAACGGTAGTATCTGAATTACAACAGGGTGTAGCTTCTT CTTATCGAACTTGTCTACCCATTGCAATGCTTCAAGAGATACAAACTCTTTCATTACCTCATTTACATCCCATCACTGTT TATGGTCATCAAGGAAAAGGAAGTGTTGAATTTGATATTCGCAATAACACTCACTTCCCGACACAAATACCTAATGCTAG TTTAGTATTTGCGTGTGTTGAAAGAGTCGTTGCGCACTATTCTGGGACAAGCCTAGCATTTGCCGAGCCTATGGTCGTTT TACGCTATGAGGTTGGGCAATTTTACAAATGGCATTATGATGCAATACATGCACACACACCGGCAATTGAATCAGAGCTA AAGCAATTTGGTCAGCGTAATCGTACTGCGATACTGTACTTAAATGATGATTTCACTGGTGGGGAGACGGAGTTTAAAGC GCCATATATTCAAGTGCATCCTAAGGCTGGTTCTGTCTTAGTTTTTGATAATGTAGATTGTAATGGGCGAACTTTGATAT CGTCTTTACATCGTGGCTGCGAAGTCAGTACTGGCCAAAAGTGGATATGTACACAATGGTTTAGAGATAAACCATTTTGG CTTAGGTCTGGGCTCTTAACTTAG
Upstream 100 bases:
>100_bases TCCGCACACAGATGTTTTTATTTTGTTGCTTAAATGTTATTTTTGGTGGGTTTTGGAGATGTATGATCTATGCTTCGCTA ATTTTTTAGGTATTTGATAT
Downstream 100 bases:
>100_bases TTTCAGCTAGATTAAATTTGAATCATTTTTTTACAAGCAAATTTTAGGCTAAATTATTTTATCCCTGAAGAGTATTTTCT CTGTCGGGGTTAAGGCAGAA
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: Procollagen-Proline Dioxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; Oxygenase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQQLFFRLLEDRYFNRLPEEWVLRSAQESVDFVRFWLVHCFRSAASERELATVLFFAAKWKLEELTFLRSFWQSYTSVMD EAAELTLRNLYFQLIPQINLDHDNHLDAIAIFSFVLKFEQQTVVSELQQGVASSYRTCLPIAMLQEIQTLSLPHLHPITV YGHQGKGSVEFDIRNNTHFPTQIPNASLVFACVERVVAHYSGTSLAFAEPMVVLRYEVGQFYKWHYDAIHAHTPAIESEL KQFGQRNRTAILYLNDDFTGGETEFKAPYIQVHPKAGSVLVFDNVDCNGRTLISSLHRGCEVSTGQKWICTQWFRDKPFW LRSGLLT
Sequences:
>Translated_327_residues MQQLFFRLLEDRYFNRLPEEWVLRSAQESVDFVRFWLVHCFRSAASERELATVLFFAAKWKLEELTFLRSFWQSYTSVMD EAAELTLRNLYFQLIPQINLDHDNHLDAIAIFSFVLKFEQQTVVSELQQGVASSYRTCLPIAMLQEIQTLSLPHLHPITV YGHQGKGSVEFDIRNNTHFPTQIPNASLVFACVERVVAHYSGTSLAFAEPMVVLRYEVGQFYKWHYDAIHAHTPAIESEL KQFGQRNRTAILYLNDDFTGGETEFKAPYIQVHPKAGSVLVFDNVDCNGRTLISSLHRGCEVSTGQKWICTQWFRDKPFW LRSGLLT >Mature_327_residues MQQLFFRLLEDRYFNRLPEEWVLRSAQESVDFVRFWLVHCFRSAASERELATVLFFAAKWKLEELTFLRSFWQSYTSVMD EAAELTLRNLYFQLIPQINLDHDNHLDAIAIFSFVLKFEQQTVVSELQQGVASSYRTCLPIAMLQEIQTLSLPHLHPITV YGHQGKGSVEFDIRNNTHFPTQIPNASLVFACVERVVAHYSGTSLAFAEPMVVLRYEVGQFYKWHYDAIHAHTPAIESEL KQFGQRNRTAILYLNDDFTGGETEFKAPYIQVHPKAGSVLVFDNVDCNGRTLISSLHRGCEVSTGQKWICTQWFRDKPFW LRSGLLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24651477, Length=185, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI116008128, Length=120, Percent_Identity=34.1666666666667, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI116008432, Length=120, Percent_Identity=34.1666666666667, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI116008130, Length=121, Percent_Identity=31.404958677686, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI116008537, Length=121, Percent_Identity=31.404958677686, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24651424, Length=130, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24651418, Length=174, Percent_Identity=29.3103448275862, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI21358233, Length=183, Percent_Identity=25.6830601092896, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281361323, Length=122, Percent_Identity=33.6065573770492, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221460681, Length=129, Percent_Identity=31.7829457364341, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24651430, Length=116, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI78706702, Length=122, Percent_Identity=31.9672131147541, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37899; Mature: 37899
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLFFRLLEDRYFNRLPEEWVLRSAQESVDFVRFWLVHCFRSAASERELATVLFFAAKW CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KLEELTFLRSFWQSYTSVMDEAAELTLRNLYFQLIPQINLDHDNHLDAIAIFSFVLKFEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH QTVVSELQQGVASSYRTCLPIAMLQEIQTLSLPHLHPITVYGHQGKGSVEFDIRNNTHFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCC TQIPNASLVFACVERVVAHYSGTSLAFAEPMVVLRYEVGQFYKWHYDAIHAHTPAIESEL CCCCCHHHHHHHHHHHHHHCCCCCEEHHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHH KQFGQRNRTAILYLNDDFTGGETEFKAPYIQVHPKAGSVLVFDNVDCNGRTLISSLHRGC HHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCC EVSTGQKWICTQWFRDKPFWLRSGLLT CCCCCCCEEEHHHHCCCCHHHHCCCCC >Mature Secondary Structure MQQLFFRLLEDRYFNRLPEEWVLRSAQESVDFVRFWLVHCFRSAASERELATVLFFAAKW CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KLEELTFLRSFWQSYTSVMDEAAELTLRNLYFQLIPQINLDHDNHLDAIAIFSFVLKFEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH QTVVSELQQGVASSYRTCLPIAMLQEIQTLSLPHLHPITVYGHQGKGSVEFDIRNNTHFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCC TQIPNASLVFACVERVVAHYSGTSLAFAEPMVVLRYEVGQFYKWHYDAIHAHTPAIESEL CCCCCHHHHHHHHHHHHHHCCCCCEEHHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHH KQFGQRNRTAILYLNDDFTGGETEFKAPYIQVHPKAGSVLVFDNVDCNGRTLISSLHRGC HHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCC EVSTGQKWICTQWFRDKPFWLRSGLLT CCCCCCCEEEHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA