| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873370
Identifier: 160873370
GI number: 160873370
Start: 283106
End: 283657
Strand: Reverse
Name: 160873370
Synonym: Sbal195_0244
Alternate gene names: NA
Gene position: 283657-283106 (Counterclockwise)
Preceding gene: 160873371
Following gene: 160873369
Centisome position: 5.3
GC content: 49.82
Gene sequence:
>552_bases ATGACTAAACAAGCACACCCTATTAGCTGGATCTTAGGTTCATCACTCACAGCTGCGGCATTAGCCATTGGCGTTATCGG TGTCAGCCTAACCTTAACCGGCACAGGCTATGCGGACGATGGCCGCGCCATTCCACAAAATGCGGAATATACGGCAGAAT GTGGCAGCTGCCACATGGCTTACCCCGCGAACTTACTCCCCGCCGACAAGTGGCGCGCCATTACCGCAAATCTTGATAAT CACTTTGGGGATAACGCCAGTCTAGATCCTCAAGTCACTGCTAGAATTGAGGAATATCTGGTTCAACATGCGGCGCAAAA TGGTAAGGTGATGAAAAACAGCACGCCACTGCTTGCAGGCGCTGGGCCGCAGAAGATCACAGAACAGGCATTTTTTATTC GCAAACACGATGAGATCCCAAGACGTATGGTGCAAGATAACCCCAAAGTCGGCTCATTCAGTCAATGCAGCAATTGTCAC AACCTCGCAGAGAAGGGCATATTCGATGAAGATACCGTTAATATTCCTGGCTTTGGCCGTTGGGATGATTAG
Upstream 100 bases:
>100_bases CCTGCAATAGCCGCCAAATTTCGACCTTATAACTCATTCAATTAGATCAATTAATTTCAACACCTTCCACAGAAGGTAAC GGCACAAAAAGGAAGATGTC
Downstream 100 bases:
>100_bases CAGCCCCAGCTGCAATGCCCACGACGATGATCTTTCAAACAAGGTGGTCGAGTGGGTTAAGGAGGGCAAGGTTTTGCCCT TCGACACCATAATGCAACGC
Product: diheme cytochrome c
Products: NA
Alternate protein names: Lipoprotein; Dihem Cytochrome C; DHC Diheme Cytochrome C; Cytochrome B; Multihaem Cytochrome; Transcriptional Regulator; Dihaem Cytochrome C; Diheme Cytochrome C
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTKQAHPISWILGSSLTAAALAIGVIGVSLTLTGTGYADDGRAIPQNAEYTAECGSCHMAYPANLLPADKWRAITANLDN HFGDNASLDPQVTARIEEYLVQHAAQNGKVMKNSTPLLAGAGPQKITEQAFFIRKHDEIPRRMVQDNPKVGSFSQCSNCH NLAEKGIFDEDTVNIPGFGRWDD
Sequences:
>Translated_183_residues MTKQAHPISWILGSSLTAAALAIGVIGVSLTLTGTGYADDGRAIPQNAEYTAECGSCHMAYPANLLPADKWRAITANLDN HFGDNASLDPQVTARIEEYLVQHAAQNGKVMKNSTPLLAGAGPQKITEQAFFIRKHDEIPRRMVQDNPKVGSFSQCSNCH NLAEKGIFDEDTVNIPGFGRWDD >Mature_182_residues TKQAHPISWILGSSLTAAALAIGVIGVSLTLTGTGYADDGRAIPQNAEYTAECGSCHMAYPANLLPADKWRAITANLDNH FGDNASLDPQVTARIEEYLVQHAAQNGKVMKNSTPLLAGAGPQKITEQAFFIRKHDEIPRRMVQDNPKVGSFSQCSNCHN LAEKGIFDEDTVNIPGFGRWDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19809; Mature: 19678
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQAHPISWILGSSLTAAALAIGVIGVSLTLTGTGYADDGRAIPQNAEYTAECGSCHMA CCCCCCCHHHHHCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEC YPANLLPADKWRAITANLDNHFGDNASLDPQVTARIEEYLVQHAAQNGKVMKNSTPLLAG CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEC AGPQKITEQAFFIRKHDEIPRRMVQDNPKVGSFSQCSNCHNLAEKGIFDEDTVNIPGFGR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC WDD CCC >Mature Secondary Structure TKQAHPISWILGSSLTAAALAIGVIGVSLTLTGTGYADDGRAIPQNAEYTAECGSCHMA CCCCCCHHHHHCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEC YPANLLPADKWRAITANLDNHFGDNASLDPQVTARIEEYLVQHAAQNGKVMKNSTPLLAG CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEC AGPQKITEQAFFIRKHDEIPRRMVQDNPKVGSFSQCSNCHNLAEKGIFDEDTVNIPGFGR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC WDD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA