| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873352
Identifier: 160873352
GI number: 160873352
Start: 262903
End: 263910
Strand: Reverse
Name: 160873352
Synonym: Sbal195_0226
Alternate gene names: NA
Gene position: 263910-262903 (Counterclockwise)
Preceding gene: 160873353
Following gene: 160873311
Centisome position: 4.94
GC content: 45.54
Gene sequence:
>1008_bases ATGATTCAAATAACACCATTAAACATAAACTTGCATTGTGTTGCCCTACTCTTATGCCTTGTGAGTCTCTCGCAGAACGC CAATGCAGCTAAAGTGATCGTGATCGAAAGCTATCACCATGGATATCAATGGGACCAAGAATACTACCGAGCGATTAATG ACACGCTTAGCCCCCTGCACGATGTGAGTTATTTCGAAATGGATACCAAGCGTTTACCAAAGGAGCAATTTGCCGAAAGA GCTGATTTAGCGTGGAAGTACATCCAAAGCCGAGCACCTCAACTGGTTATTCTCGCCGATGATAATGCGGTTAACCTGTT ACATCAGCGCCTCAATGACAGCTTAATCCCAGTGGTCTATCTTGGGGTGAATATGAACCCTAGAGAGTATCATCTCAATG AGCACAAGCGCTTTACCGGTGTCATAGAAAGGCCGCTGCTACGACGCTCACTCCTCCTCATTCAACGCTTACTCCCACAG ACTGTGCACCGTAAAATACTAGTCCTATTTGACCAAGGTGTTACCTCAGACTCAGCTGCAGAATACATCAGCAAACAACA CTCAAGTATTTTGGGTGATATCGAAGTGAATTTGGTGCAATTGTCACAGCTCGCAGATTGGCAGCAACAGGTACTGACGG CGAAGGAGCAAGGCTATAACGCCATTGTCGTGGCGCTCTACCAAACAGTGAGGGATGCAGAAAATCGTTCTGTGGATGCG GATCAGCTCCTAAAATGGATATCAGAACATACACCGGTACCGAATTTCGGATTTTGGGGATTTAGCGTCTCCTCCGAGGG CAATATTGGAGGTTACGTACTCGATGGCTATCATCATGGCGAATTAGCAGCGAATATGGCGTTAAAAATACTGGCTGGCG AGAAACCCGAAAACATCTTTCCAGTGACGGATGATCTTGGGAAATACATGTTTAGTCAGCAAGGGTTGGCCAAATGGAAT ATTAGCCTACCGAAAGAAATCGAGAAAAATACTCTTTGGGTGAAGTAA
Upstream 100 bases:
>100_bases AGCCTCCTAGCCTAATAACTAGTGAGGCTTTTTTATTATCTCAATCTAGAAAATTAAAGGTGAACTATACTCAAGGCAGC ATCAAAACCTAAGACTGCGT
Downstream 100 bases:
>100_bases CGAAAAAAAGACATAAAAAAGCCGGGCATTAGCCCGGCTTTTTAAAAGTGTAACCTTAATTACTCAGCAGCTTCAACATC AACAGCTTGAGCAGCTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: PAS/PAC Sensor Signal Transduction Histidine Kinase; Sensory Box Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; PAS/PAC Sensor Protein; Histidine Kinase; Ntr Family Two-Component System Sensory/Regulatory Protein; PAS Sensor Protein; Diguanylate Cyclase; Two-Component Sensor Histidine Kinase; Two Component Sensor Histidine Kinase; Sensory Box Protein; Signal Transduction Histidine Kinase; Sensor Histidine Kinase Response Regulator; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MIQITPLNINLHCVALLLCLVSLSQNANAAKVIVIESYHHGYQWDQEYYRAINDTLSPLHDVSYFEMDTKRLPKEQFAER ADLAWKYIQSRAPQLVILADDNAVNLLHQRLNDSLIPVVYLGVNMNPREYHLNEHKRFTGVIERPLLRRSLLLIQRLLPQ TVHRKILVLFDQGVTSDSAAEYISKQHSSILGDIEVNLVQLSQLADWQQQVLTAKEQGYNAIVVALYQTVRDAENRSVDA DQLLKWISEHTPVPNFGFWGFSVSSEGNIGGYVLDGYHHGELAANMALKILAGEKPENIFPVTDDLGKYMFSQQGLAKWN ISLPKEIEKNTLWVK
Sequences:
>Translated_335_residues MIQITPLNINLHCVALLLCLVSLSQNANAAKVIVIESYHHGYQWDQEYYRAINDTLSPLHDVSYFEMDTKRLPKEQFAER ADLAWKYIQSRAPQLVILADDNAVNLLHQRLNDSLIPVVYLGVNMNPREYHLNEHKRFTGVIERPLLRRSLLLIQRLLPQ TVHRKILVLFDQGVTSDSAAEYISKQHSSILGDIEVNLVQLSQLADWQQQVLTAKEQGYNAIVVALYQTVRDAENRSVDA DQLLKWISEHTPVPNFGFWGFSVSSEGNIGGYVLDGYHHGELAANMALKILAGEKPENIFPVTDDLGKYMFSQQGLAKWN ISLPKEIEKNTLWVK >Mature_335_residues MIQITPLNINLHCVALLLCLVSLSQNANAAKVIVIESYHHGYQWDQEYYRAINDTLSPLHDVSYFEMDTKRLPKEQFAER ADLAWKYIQSRAPQLVILADDNAVNLLHQRLNDSLIPVVYLGVNMNPREYHLNEHKRFTGVIERPLLRRSLLLIQRLLPQ TVHRKILVLFDQGVTSDSAAEYISKQHSSILGDIEVNLVQLSQLADWQQQVLTAKEQGYNAIVVALYQTVRDAENRSVDA DQLLKWISEHTPVPNFGFWGFSVSSEGNIGGYVLDGYHHGELAANMALKILAGEKPENIFPVTDDLGKYMFSQQGLAKWN ISLPKEIEKNTLWVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38170; Mature: 38170
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQITPLNINLHCVALLLCLVSLSQNANAAKVIVIESYHHGYQWDQEYYRAINDTLSPLH CEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH DVSYFEMDTKRLPKEQFAERADLAWKYIQSRAPQLVILADDNAVNLLHQRLNDSLIPVVY HHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEE LGVNMNPREYHLNEHKRFTGVIERPLLRRSLLLIQRLLPQTVHRKILVLFDQGVTSDSAA EECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHH EYISKQHSSILGDIEVNLVQLSQLADWQQQVLTAKEQGYNAIVVALYQTVRDAENRSVDA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH DQLLKWISEHTPVPNFGFWGFSVSSEGNIGGYVLDGYHHGELAANMALKILAGEKPENIF HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEECCEECCHHHHHHHEEEEECCCCCCCC PVTDDLGKYMFSQQGLAKWNISLPKEIEKNTLWVK CCHHHHHHHHHHCCCCCEECCCCCCHHCCCCCCCC >Mature Secondary Structure MIQITPLNINLHCVALLLCLVSLSQNANAAKVIVIESYHHGYQWDQEYYRAINDTLSPLH CEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH DVSYFEMDTKRLPKEQFAERADLAWKYIQSRAPQLVILADDNAVNLLHQRLNDSLIPVVY HHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEE LGVNMNPREYHLNEHKRFTGVIERPLLRRSLLLIQRLLPQTVHRKILVLFDQGVTSDSAA EECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHH EYISKQHSSILGDIEVNLVQLSQLADWQQQVLTAKEQGYNAIVVALYQTVRDAENRSVDA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH DQLLKWISEHTPVPNFGFWGFSVSSEGNIGGYVLDGYHHGELAANMALKILAGEKPENIF HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEECCEECCHHHHHHHEEEEECCCCCCCC PVTDDLGKYMFSQQGLAKWNISLPKEIEKNTLWVK CCHHHHHHHHHHCCCCCEECCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA