| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gltP [H]
Identifier: 160873274
GI number: 160873274
Start: 175120
End: 176370
Strand: Reverse
Name: gltP [H]
Synonym: Sbal195_0148
Alternate gene names: 160873274
Gene position: 176370-175120 (Counterclockwise)
Preceding gene: 160873275
Following gene: 160873273
Centisome position: 3.3
GC content: 49.16
Gene sequence:
>1251_bases ATGAAGAGCAAGAGTTTATTAGGCAATATTGGTGTGCAAGTGGTTATTGCCATGATTATCGGCGCGCTAGTCGGTTTTAT CATGGGCGAGAGTGCAAGCGTGTTTGCACCACTCGGAACCATTTTTATCCATTTAATCAAAATGCTAGTGATCCCACTAG TGTTAGTTTCTATCATCAGCGGTGCCGCGAGCTTAGGCGATAGCCCATCGGCGGGTAAGATTGGCATCGGCACTTTCGGC TTCTTTATCGTGACATCTGGCATCGCCGTGGCACTGGCGTTGGTGATGGGTAATCTGTTTCAACCGGGCGCGGGTGTGGA TTTCACTGCCCACAGCAGCTCAGATTTGATGGAAGTAACTAAGGAACACGGCGCATTGCCTGGGGTCATGGATACCTTTA TCGGTATGATCCCAACCAATGTGTTCGAATCGCTGAACGGCGGTAACATCTTACAAATCTTAGTCTTTAGTATCTTTTTC GGTATCGCGCTGACTAAGGTTAAAGGCGATGGCGCTAAGCCTATTTTGGCCGCACTCAACACTGTCGTCGACGCCTTTGT GTGGATGATCAACTGCGTGATGATCATTGCGCCTATTGGTGTATTTGGTTTGATGGCCGATTCCGTGGGCACCTTCGGTT TCGATGCGTTAGAAGTGGTATTTAAGTTATTCGCCGTGTTTGTGGCCGCGATTCTGATCTACGGTTTTATCTTCTTCCCA TTGGTGGTGCAGCTCTTTTCAAGAGTGTCGGCGCGCCAGTTTATTTCGGCAATGAAGAAACCACAGGTGATGGCGTTATC GACCGCCTCGTCAATGGCGACGCTGCCGGTGAATATGGAAACCTGCGAGGAAGATCTTAAAGTCTCTAAAGCAACCACAG CCTTCGTGCTGCCGTTAGGCGCTACGATCAATATGAGCGGCAACGCGATTTATTATGGTTTAGTGGCCATGTTCTTCGCC CAAATGTATAACGTCGACCTGTCGATGACGGCCTATGCGGCCATTATCTTCACCTCAACCTTAGGCGCAATTGGTCAAGC GGGTGTGCCCGGTCCGTCTTTCTTAGTGGTAGCTGTGCTGTTAGCGGCTGGCATTCCTATCGATGGCTTACCTTTGCTAT TTGCCTTAGACAGAGTGTTTGACATGATCCGCACCGCACTTAATATCACTGGCGATGCGGCTTGTGCCTTGATCATGGAT AAGTACACAGAAGTTGAAGTTAAAGCGGATAGCGAGCACAGCTTAAGCTAG
Upstream 100 bases:
>100_bases TTAGCCTAGAGTAGGCCTTAATCACTAAGGTTTACGGCGTCTAGATTCAAATCGTCTGTCATGACACAAAATGCTGCGGC AACTGGGGAGTTTCGCAAGA
Downstream 100 bases:
>100_bases CAAATACAGTCACTCAACGCTTCAAATACCGGCTTGAATAGGCAACCCTTATTCAAGCCTTTTTTATGCCTGCTGCACGG CATAACACTCCCGCTTCTAC
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKSKSLLGNIGVQVVIAMIIGALVGFIMGESASVFAPLGTIFIHLIKMLVIPLVLVSIISGAASLGDSPSAGKIGIGTFG FFIVTSGIAVALALVMGNLFQPGAGVDFTAHSSSDLMEVTKEHGALPGVMDTFIGMIPTNVFESLNGGNILQILVFSIFF GIALTKVKGDGAKPILAALNTVVDAFVWMINCVMIIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFIFFP LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLGATINMSGNAIYYGLVAMFFA QMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACALIMD KYTEVEVKADSEHSLS
Sequences:
>Translated_416_residues MKSKSLLGNIGVQVVIAMIIGALVGFIMGESASVFAPLGTIFIHLIKMLVIPLVLVSIISGAASLGDSPSAGKIGIGTFG FFIVTSGIAVALALVMGNLFQPGAGVDFTAHSSSDLMEVTKEHGALPGVMDTFIGMIPTNVFESLNGGNILQILVFSIFF GIALTKVKGDGAKPILAALNTVVDAFVWMINCVMIIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFIFFP LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLGATINMSGNAIYYGLVAMFFA QMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACALIMD KYTEVEVKADSEHSLS >Mature_416_residues MKSKSLLGNIGVQVVIAMIIGALVGFIMGESASVFAPLGTIFIHLIKMLVIPLVLVSIISGAASLGDSPSAGKIGIGTFG FFIVTSGIAVALALVMGNLFQPGAGVDFTAHSSSDLMEVTKEHGALPGVMDTFIGMIPTNVFESLNGGNILQILVFSIFF GIALTKVKGDGAKPILAALNTVVDAFVWMINCVMIIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFIFFP LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLGATINMSGNAIYYGLVAMFFA QMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACALIMD KYTEVEVKADSEHSLS
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=455, Percent_Identity=29.2307692307692, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI21314632, Length=414, Percent_Identity=29.4685990338164, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI5032093, Length=402, Percent_Identity=31.3432835820896, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI40254478, Length=464, Percent_Identity=27.5862068965517, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI66773030, Length=470, Percent_Identity=27.6595744680851, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI223468566, Length=278, Percent_Identity=31.294964028777, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI223468564, Length=272, Percent_Identity=31.6176470588235, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI4827012, Length=324, Percent_Identity=31.1728395061728, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI262359914, Length=374, Percent_Identity=28.3422459893048, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI194239697, Length=271, Percent_Identity=30.2583025830258, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI301601644, Length=188, Percent_Identity=32.9787234042553, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1790514, Length=426, Percent_Identity=34.037558685446, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI1789947, Length=414, Percent_Identity=29.4685990338164, Blast_Score=172, Evalue=4e-44, Organism=Escherichia coli, GI1788024, Length=411, Percent_Identity=26.5206812652068, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1789473, Length=396, Percent_Identity=27.020202020202, Blast_Score=106, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71996953, Length=457, Percent_Identity=28.0087527352298, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI193206654, Length=419, Percent_Identity=29.5942720763723, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI71983106, Length=454, Percent_Identity=27.7533039647577, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI71983099, Length=455, Percent_Identity=27.4725274725275, Blast_Score=161, Evalue=5e-40, Organism=Caenorhabditis elegans, GI193206505, Length=421, Percent_Identity=28.0285035629454, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17541374, Length=423, Percent_Identity=29.7872340425532, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17537407, Length=422, Percent_Identity=27.7251184834123, Blast_Score=147, Evalue=7e-36, Organism=Drosophila melanogaster, GI24583025, Length=433, Percent_Identity=24.2494226327945, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI17137668, Length=433, Percent_Identity=24.2494226327945, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24583023, Length=433, Percent_Identity=24.2494226327945, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI281360483, Length=440, Percent_Identity=26.5909090909091, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI17137666, Length=440, Percent_Identity=26.5909090909091, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI281360481, Length=440, Percent_Identity=26.5909090909091, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43576; Mature: 43576
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKSLLGNIGVQVVIAMIIGALVGFIMGESASVFAPLGTIFIHLIKMLVIPLVLVSIIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAASLGDSPSAGKIGIGTFGFFIVTSGIAVALALVMGNLFQPGAGVDFTAHSSSDLMEVT HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHH KEHGALPGVMDTFIGMIPTNVFESLNGGNILQILVFSIFFGIALTKVKGDGAKPILAALN HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TVVDAFVWMINCVMIIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFIFFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLG HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHEEEEECC ATINMSGNAIYYGLVAMFFAQMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVL CEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACALIMDKYTEVEVKADSEHSLS HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCC >Mature Secondary Structure MKSKSLLGNIGVQVVIAMIIGALVGFIMGESASVFAPLGTIFIHLIKMLVIPLVLVSIIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAASLGDSPSAGKIGIGTFGFFIVTSGIAVALALVMGNLFQPGAGVDFTAHSSSDLMEVT HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHH KEHGALPGVMDTFIGMIPTNVFESLNGGNILQILVFSIFFGIALTKVKGDGAKPILAALN HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TVVDAFVWMINCVMIIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFIFFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLG HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHEEEEECC ATINMSGNAIYYGLVAMFFAQMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVL CEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACALIMDKYTEVEVKADSEHSLS HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]