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The map label for this gene is yhdW [H]

Identifier: 160873221

GI number: 160873221

Start: 111793

End: 113616

Strand: Reverse

Name: yhdW [H]

Synonym: Sbal195_0095

Alternate gene names: 160873221

Gene position: 113616-111793 (Counterclockwise)

Preceding gene: 160873222

Following gene: 160873217

Centisome position: 2.12

GC content: 49.01

Gene sequence:

>1824_bases
ATGCTGAATCCTGAACACAGTTACTGGCATGACACGCTTAAAGCCATTCGTCGTTGCGGTAGAAAACTCATTGAATTTGA
ACTGCTATTTACCTTAGTGTCGGCGGGTATTATCGTCCCGTCTTTTGGCTGGCTACTGCGCCATCTGATTGCCAAAACGG
GCAATGTCACCATAACCAATTACGACTTAATCGCCTTCGCCATGTCTCCCTATGGCTTGCTATTTATGATCATTACCCTA
TTCAGCAGCTTTACCGTGTTTTTTACCCAGCGTGCTGGGGTCACGATTCTGGCCGCATCAGGGTTATACGATATTCCCAT
TGGCCCAGTGCGGGCACTGATTTTCGCCACGGCGCGCTTACCCGTATTCATTCGCCTTGGTTGCATATATGCGGCTTGCT
TACTGCTGCTCAGCGTACCTTTTATGGGATTAGGGTATCTCATTTTCAGCGTGTTTCTACAGGGACACGACATCAATTAC
TACCTGTATTTCAAGCCAGCAGAATGGTATTTAGCCTTATCGAGCATGGCCTTCTTAGCGTTACTCTATCTGCTTATTAG
CTTATATCTGTGGGCCAAAGCGGCCTTTTCCCTGACGATAATTGTCAGTGAAACAACCGATGCATTAACGGCACTCAAAC
GCAGTTGGCAGTTAAGTGCGGGTAATGAACGCGCGATTATGTGGCACGCGGCGGGTTGGTGGTTAAGGATAGGGGCTTTA
CTGTACCCCTTAATGCTGTTGATCTCGTGGGGGGCCGATAGCTTACTCGACCGGGTTTCACTGACACTTTCGGCAGAATT
AGCCATGTTGGCCCTCGTCTCTGCACTGATTTTTATGCTGAGTGCGACGTGGTCCTTGCTCGGCATGTTTGGCGAAGCCT
TTATCATCTTGCTGTTATACCGCCAACTGGGAGAGAAACCTGCAGGGTTAGAACGTCTTGGACGAGAGACAGTAAAAAAG
ACTTCAGAGCTGTCGATTTACACTCTAAGTGGCGTCTTGGTCACGACTTTTTTAATCATGCTGGGATTTGGAGTGTATGC
CCTAAACAGTGAGCCACAAAGGGATGAAATCCTCATTTCAGCCCACCGAGCGGGGGCAGCTAGGGCACCAGAAAATACCC
TTGCGGCTTTGCGTTTAGCGATGGCAGAAAAGGCCGATTATGCTGAAATAGATGTGCAAACCGCCGCTGACGGCACCTTA
ATGGTGCTGCACGATGCGGATTTAATGCGTATCGCGGGCGATCCACGGCGAGTTGCTAATCTCAGCGCCAGTGAAATACA
ACAACTCGATGCGGGTCGCTGGCACAGTGCCGCCTTTGCAGGTGAATCCGTGCCGACACTACTACAAATGCTCAATGAGG
CGCGCAATAAGATAGGTTTGAATATTGAGCTTAAATATAATCAAGCCGATCCCACCTTAGCGCAGGCTGTTGTTGCCCTA
CTGCAACAACAGAAAATGACACAACAAGTAGTGATTACCTCGCTCGAAGCAAGAGCCATTGAAGAAGTGCAACGACTAGA
CCCTTCAATCCAAACAGGGTTGATTGTCACCCAATCTATCGGCGACCCGATTAAGTCGAATGCGCAATTCCTAGCGATAA
ATCAGTCGATTACCAATGAGAAGTTTATCGCCAGAGCGCATAAGGGCGGCAAGCAAGTTCATGTGTGGACAGTGAACAAT
CCACGGCAAATGCTACGCATGTTAGCACTGGGAGCCGATGTACTGATCACCGACTATCCACAGGAAGCGGTGGAAATACG
AGAACAATGGCTATCACTGTCACCCGTTGAGCAGACGGCACTGCGCCTACGTTATGTACTGTAA

Upstream 100 bases:

>100_bases
TTTAACGGCCTGCCCATATCAAAACATTGCACCAATGACTAACCGTCAACCGGAAACGCTGCTAAATTACAGTCCTAACT
CGCACGAATAAGGAAGCTGC

Downstream 100 bases:

>100_bases
ATGCCGCAACGATTAGCTGGGCATAGCCTCAAGGCGCTTAGCTCTTCGCTGCAGTAACCAGAAGATGACTAATACCCCAA
AGGAAGCGGCGAAGGTGGTC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MLNPEHSYWHDTLKAIRRCGRKLIEFELLFTLVSAGIIVPSFGWLLRHLIAKTGNVTITNYDLIAFAMSPYGLLFMIITL
FSSFTVFFTQRAGVTILAASGLYDIPIGPVRALIFATARLPVFIRLGCIYAACLLLLSVPFMGLGYLIFSVFLQGHDINY
YLYFKPAEWYLALSSMAFLALLYLLISLYLWAKAAFSLTIIVSETTDALTALKRSWQLSAGNERAIMWHAAGWWLRIGAL
LYPLMLLISWGADSLLDRVSLTLSAELAMLALVSALIFMLSATWSLLGMFGEAFIILLLYRQLGEKPAGLERLGRETVKK
TSELSIYTLSGVLVTTFLIMLGFGVYALNSEPQRDEILISAHRAGAARAPENTLAALRLAMAEKADYAEIDVQTAADGTL
MVLHDADLMRIAGDPRRVANLSASEIQQLDAGRWHSAAFAGESVPTLLQMLNEARNKIGLNIELKYNQADPTLAQAVVAL
LQQQKMTQQVVITSLEARAIEEVQRLDPSIQTGLIVTQSIGDPIKSNAQFLAINQSITNEKFIARAHKGGKQVHVWTVNN
PRQMLRMLALGADVLITDYPQEAVEIREQWLSLSPVEQTALRLRYVL

Sequences:

>Translated_607_residues
MLNPEHSYWHDTLKAIRRCGRKLIEFELLFTLVSAGIIVPSFGWLLRHLIAKTGNVTITNYDLIAFAMSPYGLLFMIITL
FSSFTVFFTQRAGVTILAASGLYDIPIGPVRALIFATARLPVFIRLGCIYAACLLLLSVPFMGLGYLIFSVFLQGHDINY
YLYFKPAEWYLALSSMAFLALLYLLISLYLWAKAAFSLTIIVSETTDALTALKRSWQLSAGNERAIMWHAAGWWLRIGAL
LYPLMLLISWGADSLLDRVSLTLSAELAMLALVSALIFMLSATWSLLGMFGEAFIILLLYRQLGEKPAGLERLGRETVKK
TSELSIYTLSGVLVTTFLIMLGFGVYALNSEPQRDEILISAHRAGAARAPENTLAALRLAMAEKADYAEIDVQTAADGTL
MVLHDADLMRIAGDPRRVANLSASEIQQLDAGRWHSAAFAGESVPTLLQMLNEARNKIGLNIELKYNQADPTLAQAVVAL
LQQQKMTQQVVITSLEARAIEEVQRLDPSIQTGLIVTQSIGDPIKSNAQFLAINQSITNEKFIARAHKGGKQVHVWTVNN
PRQMLRMLALGADVLITDYPQEAVEIREQWLSLSPVEQTALRLRYVL
>Mature_607_residues
MLNPEHSYWHDTLKAIRRCGRKLIEFELLFTLVSAGIIVPSFGWLLRHLIAKTGNVTITNYDLIAFAMSPYGLLFMIITL
FSSFTVFFTQRAGVTILAASGLYDIPIGPVRALIFATARLPVFIRLGCIYAACLLLLSVPFMGLGYLIFSVFLQGHDINY
YLYFKPAEWYLALSSMAFLALLYLLISLYLWAKAAFSLTIIVSETTDALTALKRSWQLSAGNERAIMWHAAGWWLRIGAL
LYPLMLLISWGADSLLDRVSLTLSAELAMLALVSALIFMLSATWSLLGMFGEAFIILLLYRQLGEKPAGLERLGRETVKK
TSELSIYTLSGVLVTTFLIMLGFGVYALNSEPQRDEILISAHRAGAARAPENTLAALRLAMAEKADYAEIDVQTAADGTL
MVLHDADLMRIAGDPRRVANLSASEIQQLDAGRWHSAAFAGESVPTLLQMLNEARNKIGLNIELKYNQADPTLAQAVVAL
LQQQKMTQQVVITSLEARAIEEVQRLDPSIQTGLIVTQSIGDPIKSNAQFLAINQSITNEKFIARAHKGGKQVHVWTVNN
PRQMLRMLALGADVLITDYPQEAVEIREQWLSLSPVEQTALRLRYVL

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Escherichia coli, GI1789858, Length=228, Percent_Identity=29.3859649122807, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 67376; Mature: 67376

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPEHSYWHDTLKAIRRCGRKLIEFELLFTLVSAGIIVPSFGWLLRHLIAKTGNVTITN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCEEEEE
YDLIAFAMSPYGLLFMIITLFSSFTVFFTQRAGVTILAASGLYDIPIGPVRALIFATARL
CEEEEEHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCC
PVFIRLGCIYAACLLLLSVPFMGLGYLIFSVFLQGHDINYYLYFKPAEWYLALSSMAFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHH
LLYLLISLYLWAKAAFSLTIIVSETTDALTALKRSWQLSAGNERAIMWHAAGWWLRIGAL
HHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHH
LYPLMLLISWGADSLLDRVSLTLSAELAMLALVSALIFMLSATWSLLGMFGEAFIILLLY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLGEKPAGLERLGRETVKKTSELSIYTLSGVLVTTFLIMLGFGVYALNSEPQRDEILIS
HHHCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCEEEE
AHRAGAARAPENTLAALRLAMAEKADYAEIDVQTAADGTLMVLHDADLMRIAGDPRRVAN
ECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCHHHHCCCCHHHHC
LSASEIQQLDAGRWHSAAFAGESVPTLLQMLNEARNKIGLNIELKYNQADPTLAQAVVAL
CCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
LQQQKMTQQVVITSLEARAIEEVQRLDPSIQTGLIVTQSIGDPIKSNAQFLAINQSITNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCCCCEEEEEECCCCCH
KFIARAHKGGKQVHVWTVNNPRQMLRMLALGADVLITDYPQEAVEIREQWLSLSPVEQTA
HHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCHHHHH
LRLRYVL
HHHHHCC
>Mature Secondary Structure
MLNPEHSYWHDTLKAIRRCGRKLIEFELLFTLVSAGIIVPSFGWLLRHLIAKTGNVTITN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCEEEEE
YDLIAFAMSPYGLLFMIITLFSSFTVFFTQRAGVTILAASGLYDIPIGPVRALIFATARL
CEEEEEHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCC
PVFIRLGCIYAACLLLLSVPFMGLGYLIFSVFLQGHDINYYLYFKPAEWYLALSSMAFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHH
LLYLLISLYLWAKAAFSLTIIVSETTDALTALKRSWQLSAGNERAIMWHAAGWWLRIGAL
HHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHH
LYPLMLLISWGADSLLDRVSLTLSAELAMLALVSALIFMLSATWSLLGMFGEAFIILLLY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLGEKPAGLERLGRETVKKTSELSIYTLSGVLVTTFLIMLGFGVYALNSEPQRDEILIS
HHHCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCEEEE
AHRAGAARAPENTLAALRLAMAEKADYAEIDVQTAADGTLMVLHDADLMRIAGDPRRVAN
ECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCHHHHCCCCHHHHC
LSASEIQQLDAGRWHSAAFAGESVPTLLQMLNEARNKIGLNIELKYNQADPTLAQAVVAL
CCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
LQQQKMTQQVVITSLEARAIEEVQRLDPSIQTGLIVTQSIGDPIKSNAQFLAINQSITNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCCCCEEEEEECCCCCH
KFIARAHKGGKQVHVWTVNNPRQMLRMLALGADVLITDYPQEAVEIREQWLSLSPVEQTA
HHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCHHHHH
LRLRYVL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]