| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is natB [H]
Identifier: 160873200
GI number: 160873200
Start: 92078
End: 93217
Strand: Reverse
Name: natB [H]
Synonym: Sbal195_0074
Alternate gene names: 160873200
Gene position: 93217-92078 (Counterclockwise)
Preceding gene: 160873201
Following gene: 160873199
Centisome position: 1.74
GC content: 49.65
Gene sequence:
>1140_bases ATGAATAAAATAATGGCTATGGTTCGTAAAGAACTCATCGACGCCGCCCGCGATAAGCGCTCTGTGATGGCGGGGCTTTA TTACGCCATCGGCACGCCGCTGATCATGTGCGGCCTGTTTATGGTGTTAATTGGTCAGCTGACGAGTCCAGACGATCTAA AAATCACTATTACCAATCCCGATAAAGCACCGGATTTAGTGCGTTTTTTGTCGAATAAAGGCATTAGCAGCGCTGAAGTG AAGGACAGTGAGCTTAAAGCTATAGAGCTTATCATCAGCCCCGACTATGCCGCGCAGATGAATCAAGGCAAAGGCGCCGA GATCACGATTGTTGCCGATAATTCCGATGAAAAACTGCAAAACTCGATTCGCAGACTCGAGAAGCAACTGCAGTCCTACA GCACAGAAATGGGCAGCCTACGGCTGATTGCCCGCGGTATCGATCCCCGCGTGATGCAGCCACTGAAGGTCAGTGTCCAC GACCAAGCGACCACAGATTCGAAGGGCGGGATGATCTTAGGTATCGCGATTTTCACTATGATTTACTCAGTGTTTATCTC GGGCATGAACCTCGCCATAGATACCAGCGCGGGTGAACGCGAACGTAACTCGCTGGCTCTGTTACTCAGTCATCCATTGA CCACACGCCAGTTAGTGCTGTCGAAAATCATCGCTGTGAGTCTGTTTGCCCTCTTAGGCTTAGTACTGATTTTGCTGGTA TCTAGAATCGCCTACACCTTTGTACCTTGGCAGGAGTTAGGCTTTAGCGTCAACATCACCACAGAATTTATGGCGCTGAT GTTAGTGGTCGGTATCCCTGTTGCGTTAATGGCCGCTTGCCTGCAACTGTTTGTGTCTTTCATGGCGAAAACCTTTAAGG AAGCCCAGTCCTATCTGACTATGGTGCTGTTTGTGCCCTTAGCCTTGTCGATGGCCGCCAGCTACAACATAGCGCCAGAT ATGCTGCAGTGGCTGCCAGTCTCGGGTCAGCAACAGGCCTTAATGGACTTTATCAAAGGTAAAGACTTGCCCATGTTGCA GTTACTCGTTTCGACCCTAGGCACACTCGCCATTGCGGTATTACTGGCGTTTGGCATGGAAAGGTCGCTCAAGAGTGAAA AAGTGATCTTCGGTTTGTAG
Upstream 100 bases:
>100_bases GCATGATGACTCAGCAAAGATTACGCCCGCTGGTTTTAACCTTTAAGAGCTTGATATGTAAAGGCGTGGCATTTAAGAAC ATGGTTAAAGGAATGACAGC
Downstream 100 bases:
>100_bases GATGCTTCGATTGATCAACTTGGGGCAATAAACTTTAACCGACAAACTTGGGAACGACTATCCTGTCGTTCCCAAGTTGA AAACCTCAACAGTAATGGGA
Product: transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MNKIMAMVRKELIDAARDKRSVMAGLYYAIGTPLIMCGLFMVLIGQLTSPDDLKITITNPDKAPDLVRFLSNKGISSAEV KDSELKAIELIISPDYAAQMNQGKGAEITIVADNSDEKLQNSIRRLEKQLQSYSTEMGSLRLIARGIDPRVMQPLKVSVH DQATTDSKGGMILGIAIFTMIYSVFISGMNLAIDTSAGERERNSLALLLSHPLTTRQLVLSKIIAVSLFALLGLVLILLV SRIAYTFVPWQELGFSVNITTEFMALMLVVGIPVALMAACLQLFVSFMAKTFKEAQSYLTMVLFVPLALSMAASYNIAPD MLQWLPVSGQQQALMDFIKGKDLPMLQLLVSTLGTLAIAVLLAFGMERSLKSEKVIFGL
Sequences:
>Translated_379_residues MNKIMAMVRKELIDAARDKRSVMAGLYYAIGTPLIMCGLFMVLIGQLTSPDDLKITITNPDKAPDLVRFLSNKGISSAEV KDSELKAIELIISPDYAAQMNQGKGAEITIVADNSDEKLQNSIRRLEKQLQSYSTEMGSLRLIARGIDPRVMQPLKVSVH DQATTDSKGGMILGIAIFTMIYSVFISGMNLAIDTSAGERERNSLALLLSHPLTTRQLVLSKIIAVSLFALLGLVLILLV SRIAYTFVPWQELGFSVNITTEFMALMLVVGIPVALMAACLQLFVSFMAKTFKEAQSYLTMVLFVPLALSMAASYNIAPD MLQWLPVSGQQQALMDFIKGKDLPMLQLLVSTLGTLAIAVLLAFGMERSLKSEKVIFGL >Mature_379_residues MNKIMAMVRKELIDAARDKRSVMAGLYYAIGTPLIMCGLFMVLIGQLTSPDDLKITITNPDKAPDLVRFLSNKGISSAEV KDSELKAIELIISPDYAAQMNQGKGAEITIVADNSDEKLQNSIRRLEKQLQSYSTEMGSLRLIARGIDPRVMQPLKVSVH DQATTDSKGGMILGIAIFTMIYSVFISGMNLAIDTSAGERERNSLALLLSHPLTTRQLVLSKIIAVSLFALLGLVLILLV SRIAYTFVPWQELGFSVNITTEFMALMLVVGIPVALMAACLQLFVSFMAKTFKEAQSYLTMVLFVPLALSMAASYNIAPD MLQWLPVSGQQQALMDFIKGKDLPMLQLLVSTLGTLAIAVLLAFGMERSLKSEKVIFGL
Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]
COG id: COG1668
COG function: function code CP; ABC-type Na+ efflux pump, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41492; Mature: 41492
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIMAMVRKELIDAARDKRSVMAGLYYAIGTPLIMCGLFMVLIGQLTSPDDLKITITNP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC DKAPDLVRFLSNKGISSAEVKDSELKAIELIISPDYAAQMNQGKGAEITIVADNSDEKLQ CCCHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCCHHHHCCCCCCCEEEEEECCCHHHHH NSIRRLEKQLQSYSTEMGSLRLIARGIDPRVMQPLKVSVHDQATTDSKGGMILGIAIFTM HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHEEECCCCCCCCCCCEEHHHHHHHH IYSVFISGMNLAIDTSAGERERNSLALLLSHPLTTRQLVLSKIIAVSLFALLGLVLILLV HHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SRIAYTFVPWQELGFSVNITTEFMALMLVVGIPVALMAACLQLFVSFMAKTFKEAQSYLT HHHHHHHCCHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVLFVPLALSMAASYNIAPDMLQWLPVSGQQQALMDFIKGKDLPMLQLLVSTLGTLAIAV HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LLAFGMERSLKSEKVIFGL HHHHHHHHHCCCCCCEECC >Mature Secondary Structure MNKIMAMVRKELIDAARDKRSVMAGLYYAIGTPLIMCGLFMVLIGQLTSPDDLKITITNP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC DKAPDLVRFLSNKGISSAEVKDSELKAIELIISPDYAAQMNQGKGAEITIVADNSDEKLQ CCCHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCCHHHHCCCCCCCEEEEEECCCHHHHH NSIRRLEKQLQSYSTEMGSLRLIARGIDPRVMQPLKVSVHDQATTDSKGGMILGIAIFTM HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHEEECCCCCCCCCCCEEHHHHHHHH IYSVFISGMNLAIDTSAGERERNSLALLLSHPLTTRQLVLSKIIAVSLFALLGLVLILLV HHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SRIAYTFVPWQELGFSVNITTEFMALMLVVGIPVALMAACLQLFVSFMAKTFKEAQSYLT HHHHHHHCCHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVLFVPLALSMAASYNIAPDMLQWLPVSGQQQALMDFIKGKDLPMLQLLVSTLGTLAIAV HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LLAFGMERSLKSEKVIFGL HHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9106203; 9384377 [H]