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The map label for this gene is ctpA [H]

Identifier: 160873171

GI number: 160873171

Start: 51797

End: 53002

Strand: Reverse

Name: ctpA [H]

Synonym: Sbal195_0045

Alternate gene names: 160873171

Gene position: 53002-51797 (Counterclockwise)

Preceding gene: 160873172

Following gene: 160873170

Centisome position: 0.99

GC content: 47.35

Gene sequence:

>1206_bases
ATGAAACACATGATCCGCTATATCAGTTGCGTTGGATTAGGCCTGACTTTGGGCCTATCCATCAGCCTCTCTAGTCAAGA
GAACGCTAAGTCCTATCGCAGTGATTTTGACTATCCGTTACTGCAAGATGTGCTTGAAACTGTTGAAACTTATTACGTAA
AAACCGTTTCGAAAGAAGAGTTAGTAGAAGCGGCAATCAAAGGTATTTTTGAGCACTTAGATCCCTATTCCAGCTTTTTA
AATCACCAAGAATTACTCGATCTCAAAGACTCCAATCGCGGCGAATATTTTGGTTTCGGCTTCGAAGTCGCAACCCAAAA
TGACCACATCAACATCATCGCCCCCTTCGCCCATTCCCCAGCAGAACAAGCGGGAATACGCGCAGGCGACATTATTGTTA
AGCTCAACGACACACTGGCGACCGAGACTAACCTCGCCAATATCCTTGCCGAGATAAAAAAACATAGCCTCACCAATCAA
AGCATTAAGCTAGTGCTTAAGCACAGCAATGACGATACGACCTTTGAGGTGTCACTCAAGCCGAGCACTATCACTATCGA
ATCTGTCACCACTCAACTGCTTGATGACAATATTGGTTATGTCAGATTAAGTAGCTTCCAAGAAAACTCGACCGAAGATA
TGGTGCGCTCACTCAGCCAATGGCAAAACAAACCGCTCGCCGGGCTCATCTTAGATTTACGTAATAATCCCGGCGGCCTG
CTCGACCAAGCCGTTAAAATTGCTGACCTATTCCTCGCCAAGGGACGCATAGTCTCAACCTCTGGCCGCTTCTTCGATGC
CAACTCCGACTACTACGCCTCACCACAAACCATGCTGACTAACGTGCCCATGCTAGTGTTGATCAACAAAGGCTCGGCCT
CTGCATCAGAAGTGCTCGCCGCCGCACTGCAAGAAAATGGTCGGGCTAAGCTGTTAGGTGAAACCAGTTTCGGTAAAGGC
ACAGTCCAAAGCCTGATCCCCATCTTAGAAGACGGTAACGCGATAAAACTCACCATTGCTCAGTACAATACCCCCAGAGG
TGAAAACATTCACAATATAGGAATCGTCCCAGACATAAAAATTGCCGCAGAAACTGGTTCCGGCGCGGGTAATTTGGCTA
TAATCGACGCCCTATCCGCCCATGCATCTCTGGCCCAAGATCATCAAGTGACCTCAGCCATTGCATGGATACAGCATCAT
GACTAA

Upstream 100 bases:

>100_bases
AGGCTGGCCTATACTTTGAAATAAGGCACAAGGGGCAAGCCGTCGATCCAGCGAAATACTGTCGCTAATCATAACGGTCC
CCTCATCACAGGGGACGGCT

Downstream 100 bases:

>100_bases
TAAGAAGAAACTGTGCGCTTACTTTATTCCTTGGCCCTATTGGCCCTAAGCATTTCTCAAAGTCATGCTGCCCAGATTGC
GCTCATTATTGATGACATAG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MKHMIRYISCVGLGLTLGLSISLSSQENAKSYRSDFDYPLLQDVLETVETYYVKTVSKEELVEAAIKGIFEHLDPYSSFL
NHQELLDLKDSNRGEYFGFGFEVATQNDHINIIAPFAHSPAEQAGIRAGDIIVKLNDTLATETNLANILAEIKKHSLTNQ
SIKLVLKHSNDDTTFEVSLKPSTITIESVTTQLLDDNIGYVRLSSFQENSTEDMVRSLSQWQNKPLAGLILDLRNNPGGL
LDQAVKIADLFLAKGRIVSTSGRFFDANSDYYASPQTMLTNVPMLVLINKGSASASEVLAAALQENGRAKLLGETSFGKG
TVQSLIPILEDGNAIKLTIAQYNTPRGENIHNIGIVPDIKIAAETGSGAGNLAIIDALSAHASLAQDHQVTSAIAWIQHH
D

Sequences:

>Translated_401_residues
MKHMIRYISCVGLGLTLGLSISLSSQENAKSYRSDFDYPLLQDVLETVETYYVKTVSKEELVEAAIKGIFEHLDPYSSFL
NHQELLDLKDSNRGEYFGFGFEVATQNDHINIIAPFAHSPAEQAGIRAGDIIVKLNDTLATETNLANILAEIKKHSLTNQ
SIKLVLKHSNDDTTFEVSLKPSTITIESVTTQLLDDNIGYVRLSSFQENSTEDMVRSLSQWQNKPLAGLILDLRNNPGGL
LDQAVKIADLFLAKGRIVSTSGRFFDANSDYYASPQTMLTNVPMLVLINKGSASASEVLAAALQENGRAKLLGETSFGKG
TVQSLIPILEDGNAIKLTIAQYNTPRGENIHNIGIVPDIKIAAETGSGAGNLAIIDALSAHASLAQDHQVTSAIAWIQHH
D
>Mature_401_residues
MKHMIRYISCVGLGLTLGLSISLSSQENAKSYRSDFDYPLLQDVLETVETYYVKTVSKEELVEAAIKGIFEHLDPYSSFL
NHQELLDLKDSNRGEYFGFGFEVATQNDHINIIAPFAHSPAEQAGIRAGDIIVKLNDTLATETNLANILAEIKKHSLTNQ
SIKLVLKHSNDDTTFEVSLKPSTITIESVTTQLLDDNIGYVRLSSFQENSTEDMVRSLSQWQNKPLAGLILDLRNNPGGL
LDQAVKIADLFLAKGRIVSTSGRFFDANSDYYASPQTMLTNVPMLVLINKGSASASEVLAAALQENGRAKLLGETSFGKG
TVQSLIPILEDGNAIKLTIAQYNTPRGENIHNIGIVPDIKIAAETGSGAGNLAIIDALSAHASLAQDHQVTSAIAWIQHH
D

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=323, Percent_Identity=26.0061919504644, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 43680; Mature: 43680

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHMIRYISCVGLGLTLGLSISLSSQENAKSYRSDFDYPLLQDVLETVETYYVKTVSKEE
CHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH
LVEAAIKGIFEHLDPYSSFLNHQELLDLKDSNRGEYFGFGFEVATQNDHINIIAPFAHSP
HHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCC
AEQAGIRAGDIIVKLNDTLATETNLANILAEIKKHSLTNQSIKLVLKHSNDDTTFEVSLK
HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEC
PSTITIESVTTQLLDDNIGYVRLSSFQENSTEDMVRSLSQWQNKPLAGLILDLRNNPGGL
CCEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHH
LDQAVKIADLFLAKGRIVSTSGRFFDANSDYYASPQTMLTNVPMLVLINKGSASASEVLA
HHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCHHHHHCCCEEEEEECCCCCHHHHHH
AALQENGRAKLLGETSFGKGTVQSLIPILEDGNAIKLTIAQYNTPRGENIHNIGIVPDIK
HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCCCEE
IAAETGSGAGNLAIIDALSAHASLAQDHQVTSAIAWIQHHD
EEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHMIRYISCVGLGLTLGLSISLSSQENAKSYRSDFDYPLLQDVLETVETYYVKTVSKEE
CHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHH
LVEAAIKGIFEHLDPYSSFLNHQELLDLKDSNRGEYFGFGFEVATQNDHINIIAPFAHSP
HHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCC
AEQAGIRAGDIIVKLNDTLATETNLANILAEIKKHSLTNQSIKLVLKHSNDDTTFEVSLK
HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEC
PSTITIESVTTQLLDDNIGYVRLSSFQENSTEDMVRSLSQWQNKPLAGLILDLRNNPGGL
CCEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHH
LDQAVKIADLFLAKGRIVSTSGRFFDANSDYYASPQTMLTNVPMLVLINKGSASASEVLA
HHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCHHHHHCCCEEEEEECCCCCHHHHHH
AALQENGRAKLLGETSFGKGTVQSLIPILEDGNAIKLTIAQYNTPRGENIHNIGIVPDIK
HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCCCEE
IAAETGSGAGNLAIIDALSAHASLAQDHQVTSAIAWIQHHD
EEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]