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The map label for this gene is yrdA [H]

Identifier: 160873167

GI number: 160873167

Start: 43732

End: 44280

Strand: Reverse

Name: yrdA [H]

Synonym: Sbal195_0041

Alternate gene names: 160873167

Gene position: 44280-43732 (Counterclockwise)

Preceding gene: 160873170

Following gene: 160873164

Centisome position: 0.83

GC content: 46.81

Gene sequence:

>549_bases
ATGTCAGGGCCACTCAGAACTTACCAAGGTATTCATCCTCAATTAGGCAATAATGTGTATGTAGATGAAGCTTCGGTGCT
TGTTGGCGATATTGCGTTAGATACTGATACCAGTATTTGGCCTATGGTGGCGGCGCGTGGTGATGTTAACCATATTCGTA
TTGGTAAGCGCTCGAACGTGCAAGACGGTAGCATATTGCATGTGACGCGTAAGTCAGCTGCTCGTCCCGATGGTCATCCA
CTGATTATTGGTGATGATGTGACTATTGGTCACAAGGCGATGCTTCACGGTTGCAAAGTCGGTAATCGAGTATTGGTGGG
TATGGGGGCAATTATTCTCGACGGTGCGATTTTAGAAGATGATGTGATCTTAGGTGCGGGCTCTTTAGTGCCACCGGGCA
AGGTATTACAGAGCGGCTATTTATATGTAGGCAGCCCAGCTAAGCAGGCTCGTCCATTAACACCTGCCGAAATGGCCTTT
TTGCCAGAATCTGCCGACAACTATGTCAGACTGAAAAACGAGTACTTAGTTGAGTTACAAAACATCTAG

Upstream 100 bases:

>100_bases
AAGATAATTGTCATTTTCTCACTGTTCGTTGGATATTTGACCTGACCAGCTAGTTTTTAACCTTTATAATGCAAAAAACC
ACTCAATTAGGGACTTTTCT

Downstream 100 bases:

>100_bases
TTAGTTAGCGTTAGTCGCTTAGTATCGCTATATAAGAAAGGCGGCAGAGACTCATTCAGTCTCTGTCGCCTTTTGCTATT
TATTGATTCAAAATCTATCC

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSGPLRTYQGIHPQLGNNVYVDEASVLVGDIALDTDTSIWPMVAARGDVNHIRIGKRSNVQDGSILHVTRKSAARPDGHP
LIIGDDVTIGHKAMLHGCKVGNRVLVGMGAIILDGAILEDDVILGAGSLVPPGKVLQSGYLYVGSPAKQARPLTPAEMAF
LPESADNYVRLKNEYLVELQNI

Sequences:

>Translated_182_residues
MSGPLRTYQGIHPQLGNNVYVDEASVLVGDIALDTDTSIWPMVAARGDVNHIRIGKRSNVQDGSILHVTRKSAARPDGHP
LIIGDDVTIGHKAMLHGCKVGNRVLVGMGAIILDGAILEDDVILGAGSLVPPGKVLQSGYLYVGSPAKQARPLTPAEMAF
LPESADNYVRLKNEYLVELQNI
>Mature_181_residues
SGPLRTYQGIHPQLGNNVYVDEASVLVGDIALDTDTSIWPMVAARGDVNHIRIGKRSNVQDGSILHVTRKSAARPDGHPL
IIGDDVTIGHKAMLHGCKVGNRVLVGMGAIILDGAILEDDVILGAGSLVPPGKVLQSGYLYVGSPAKQARPLTPAEMAFL
PESADNYVRLKNEYLVELQNI

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=176, Percent_Identity=61.9318181818182, Blast_Score=233, Evalue=8e-63,
Organism=Escherichia coli, GI1787667, Length=168, Percent_Identity=32.7380952380952, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87081681, Length=174, Percent_Identity=29.8850574712644, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19440; Mature: 19308

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPLRTYQGIHPQLGNNVYVDEASVLVGDIALDTDTSIWPMVAARGDVNHIRIGKRSNV
CCCCCCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCC
QDGSILHVTRKSAARPDGHPLIIGDDVTIGHKAMLHGCKVGNRVLVGMGAIILDGAILED
CCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCHHHCCCEEECC
DVILGAGSLVPPGKVLQSGYLYVGSPAKQARPLTPAEMAFLPESADNYVRLKNEYLVELQ
CEEEECCCCCCCHHHHHCCEEEEECCHHHCCCCCHHHEEECCCCCCCEEEECCEEEEEEE
NI
CC
>Mature Secondary Structure 
SGPLRTYQGIHPQLGNNVYVDEASVLVGDIALDTDTSIWPMVAARGDVNHIRIGKRSNV
CCCCCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCC
QDGSILHVTRKSAARPDGHPLIIGDDVTIGHKAMLHGCKVGNRVLVGMGAIILDGAILED
CCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCHHHCCCEEECC
DVILGAGSLVPPGKVLQSGYLYVGSPAKQARPLTPAEMAFLPESADNYVRLKNEYLVELQ
CEEEECCCCCCCHHHHHCCEEEEECCHHHCCCCCHHHEEECCCCCCCEEEECCEEEEEEE
NI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]