| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873142
Identifier: 160873142
GI number: 160873142
Start: 19698
End: 20144
Strand: Reverse
Name: 160873142
Synonym: Sbal195_0016
Alternate gene names: NA
Gene position: 20144-19698 (Counterclockwise)
Preceding gene: 160873143
Following gene: 160873141
Centisome position: 0.38
GC content: 48.32
Gene sequence:
>447_bases ATGCCAAAACTGCTGGCGATTGCCTATAAAACTGTAAAACGCGGCCCAATGAATGAAGTTCTCTGTGCCAATGTCACCCA ACTCAGTGGCGTAGAGAAAGATGTGTTTGGTCGCCCAGGCAAACGCCAAGTCACTGTGCTTTCTAAAATTCAGTGGCAAC AGGCCTGCCATAGTATCGAGGCAGATTTACCTTGGACGACTCGCAGAGCAAATCTGCTGGTTGATGATCTCGTATTTAGC AGTGCCGATGTTGGTAAACATTTACAGATCGGCGAGTTGCGACTTGAAATAACGGGTGAGACCGACCCCTGTAAAAAAAT GGAAATAGCACATGTCGGTTTAGAGGCCGCGCTCACGCCAGATTGGCGAGGCGGTGTAACCTGCCGAGTATTAAATGATG CCATGATCCACTTAGGCGATGAGATCACTCTGGTGAATCCAAGCTAA
Upstream 100 bases:
>100_bases CCAGTGAAACCACGCAAACGCCATATCAATATTTGATCAAAAAAGGACTTTAAGTCGTATCGTTAACGACTTACTAATAA AACAAAGGATATGAGAAACT
Downstream 100 bases:
>100_bases TTTTATTCCAAGCTAGTCGACCACTCTTAGTTAATTCTCCATACTCCTCAGTAAATAGAACCAAGTGACTTGGTTCTATT TCTGCTGCGCCAACTCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: MOSC Domain Containing Protein
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPKLLAIAYKTVKRGPMNEVLCANVTQLSGVEKDVFGRPGKRQVTVLSKIQWQQACHSIEADLPWTTRRANLLVDDLVFS SADVGKHLQIGELRLEITGETDPCKKMEIAHVGLEAALTPDWRGGVTCRVLNDAMIHLGDEITLVNPS
Sequences:
>Translated_148_residues MPKLLAIAYKTVKRGPMNEVLCANVTQLSGVEKDVFGRPGKRQVTVLSKIQWQQACHSIEADLPWTTRRANLLVDDLVFS SADVGKHLQIGELRLEITGETDPCKKMEIAHVGLEAALTPDWRGGVTCRVLNDAMIHLGDEITLVNPS >Mature_147_residues PKLLAIAYKTVKRGPMNEVLCANVTQLSGVEKDVFGRPGKRQVTVLSKIQWQQACHSIEADLPWTTRRANLLVDDLVFSS ADVGKHLQIGELRLEITGETDPCKKMEIAHVGLEAALTPDWRGGVTCRVLNDAMIHLGDEITLVNPS
Specific function: Unknown
COG id: COG2258
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16300; Mature: 16169
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLLAIAYKTVKRGPMNEVLCANVTQLSGVEKDVFGRPGKRQVTVLSKIQWQQACHSIE CCCHHHHHHHHHCCCCCCCHHHCCCHHHCCCCHHHCCCCCCCEEHHHHHHHHHHHHHHCC ADLPWTTRRANLLVDDLVFSSADVGKHLQIGELRLEITGETDPCKKMEIAHVGLEAALTP CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHEEEEECCEEEEECC DWRGGVTCRVLNDAMIHLGDEITLVNPS CCCCCEEEEEECCHHEECCCEEEEECCC >Mature Secondary Structure PKLLAIAYKTVKRGPMNEVLCANVTQLSGVEKDVFGRPGKRQVTVLSKIQWQQACHSIE CCHHHHHHHHHCCCCCCCHHHCCCHHHCCCCHHHCCCCCCCEEHHHHHHHHHHHHHHCC ADLPWTTRRANLLVDDLVFSSADVGKHLQIGELRLEITGETDPCKKMEIAHVGLEAALTP CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHEEEEECCEEEEECC DWRGGVTCRVLNDAMIHLGDEITLVNPS CCCCCEEEEEECCHHEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA