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The map label for this gene is yyaS

Identifier: 16081125

GI number: 16081125

Start: 4184460

End: 4185065

Strand: Direct

Name: yyaS

Synonym: BSU40730

Alternate gene names: 16081125

Gene position: 4184460-4185065 (Clockwise)

Preceding gene: 16081124

Following gene: 16081127

Centisome position: 99.26

GC content: 38.12

Gene sequence:

>606_bases
ATGAAATATATGTATTACGGAATAGGCATACTCATATTAAGTTTGGGCATTTCCTTAACCATACAATCAGGACTGGGCAC
ATCACCCTTCGATGCCCTTTTGGTTGGTCTGTCAAAAAAAATCGGTCTTACCGTAGGAAGCTGGGAGGTCCTTATTTCTG
TGATCCTCTTAATCTGCAACGCTATATTAACGAGAAAAAAACCTATTTTGCTGGGCTTGATTACAGCATTCATTACTGGA
ATAGGCATTGACCTATGGTTGTTTGTTGTAAAAAACACCATCTATCTAAACTCGTTGTTAAGCAAACTGATTTGTTTTGG
AATTGGTTTGGTGCTCATCGGTCTTGGAACAGCCATCTATCTTCAGACGAAATTCGCATCAACACCGATCGATCATTTAA
CACTTATTATCCGAGATCTCTCCAAAAGAACAATATTGTTTTCAAGGACATTGGTATACGCTCTTTTCTTAGTATTAGCC
ATCATCTTTAAAGGCCCTATCGGCATCGGAACTCTTTTAACGGTTTGTTTGGGAGGAATGCTCCTTCACGTTTTTATGCC
TATTGTGGAAAGACATTTCTTATCAAAGAATAGAAGAGGTTATTAA

Upstream 100 bases:

>100_bases
GCTTTTATCAAAAACTGGGCTACCAGATTTCTTCACAGGAATTTATGGAGGACGGCATCCCTCACGTCTTGATGACAAAA
GAAATATCGCGGAATATAAC

Downstream 100 bases:

>100_bases
GAAACCTCTTCTCGATCCAAAAAACGAAACGCAAAACAAGCCCCGTTTCGTTGTCAATTCTTTATCTCTGGTACTGTTGA
GGTTTTATAATCAATTAAAA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKYMYYGIGILILSLGISLTIQSGLGTSPFDALLVGLSKKIGLTVGSWEVLISVILLICNAILTRKKPILLGLITAFITG
IGIDLWLFVVKNTIYLNSLLSKLICFGIGLVLIGLGTAIYLQTKFASTPIDHLTLIIRDLSKRTILFSRTLVYALFLVLA
IIFKGPIGIGTLLTVCLGGMLLHVFMPIVERHFLSKNRRGY

Sequences:

>Translated_201_residues
MKYMYYGIGILILSLGISLTIQSGLGTSPFDALLVGLSKKIGLTVGSWEVLISVILLICNAILTRKKPILLGLITAFITG
IGIDLWLFVVKNTIYLNSLLSKLICFGIGLVLIGLGTAIYLQTKFASTPIDHLTLIIRDLSKRTILFSRTLVYALFLVLA
IIFKGPIGIGTLLTVCLGGMLLHVFMPIVERHFLSKNRRGY
>Mature_201_residues
MKYMYYGIGILILSLGISLTIQSGLGTSPFDALLVGLSKKIGLTVGSWEVLISVILLICNAILTRKKPILLGLITAFITG
IGIDLWLFVVKNTIYLNSLLSKLICFGIGLVLIGLGTAIYLQTKFASTPIDHLTLIIRDLSKRTILFSRTLVYALFLVLA
IIFKGPIGIGTLLTVCLGGMLLHVFMPIVERHFLSKNRRGY

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYAS_BACSU (P37505)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65998
- RefSeq:   NP_391953.1
- ProteinModelPortal:   P37505
- EnsemblBacteria:   EBBACT00000003284
- GeneID:   937921
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40730
- NMPDR:   fig|224308.1.peg.4079
- GenoList:   BSU40730
- GeneTree:   EBGT00050000000590
- HOGENOM:   HBG728442
- OMA:   TVGSWEI
- ProtClustDB:   CLSK873499
- BioCyc:   BSUB:BSU40730-MONOMER
- InterPro:   IPR003740

Pfam domain/function: PF02588 DUF161

EC number: NA

Molecular weight: Translated: 22012; Mature: 22012

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYMYYGIGILILSLGISLTIQSGLGTSPFDALLVGLSKKIGLTVGSWEVLISVILLICN
CCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AILTRKKPILLGLITAFITGIGIDLWLFVVKNTIYLNSLLSKLICFGIGLVLIGLGTAIY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LQTKFASTPIDHLTLIIRDLSKRTILFSRTLVYALFLVLAIIFKGPIGIGTLLTVCLGGM
EEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLHVFMPIVERHFLSKNRRGY
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKYMYYGIGILILSLGISLTIQSGLGTSPFDALLVGLSKKIGLTVGSWEVLISVILLICN
CCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AILTRKKPILLGLITAFITGIGIDLWLFVVKNTIYLNSLLSKLICFGIGLVLIGLGTAIY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LQTKFASTPIDHLTLIIRDLSKRTILFSRTLVYALFLVLAIIFKGPIGIGTLLTVCLGGM
EEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLHVFMPIVERHFLSKNRRGY
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377