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The map label for this gene is yybH

Identifier: 16081116

GI number: 16081116

Start: 4177756

End: 4178145

Strand: Reverse

Name: yybH

Synonym: BSU40640

Alternate gene names: 16081116

Gene position: 4178145-4177756 (Counterclockwise)

Preceding gene: 16081118

Following gene: 16081115

Centisome position: 99.11

GC content: 41.03

Gene sequence:

>390_bases
TTGGAACAGCAATTGAAAGACATCATCTCTGCGTGTGATTTGGCAATCCAAAATGAAGATTTTGATACACTGATGAATTA
TTATTCGGAAGATGCCGTTTTAGTTGTGAAGCCGGGCATGATCGCGCGAGGCAAGGAAGAAATCAAAAAAGCGTTTATCA
CGATTGCGAACTATTTCAATCATCATATTGTCCCGACACAAGGGAAAATGATCCTGTTGGAAGCAGGTGACACGGTACTC
GTTCTTTCTCAGACACTGCTTGATTCGGATAAAAAGGACTCCGAGTATGCGATGGAAAGAAGGGCGACCTATGTATTTAA
AAAGAATGCGCAAGGCGAGTGGCTTTGTGTAATTGATAATTCATATGGTACGGATTTAATTGGTGTGTAA

Upstream 100 bases:

>100_bases
TGATTATATAGGAAAAAAGGATACTTTTCATTTTGTTTTCAAGGTTTCAGTGGTCTAGCGATGTATAATATATCCAATCA
TGATGATTGGGGGAATTCAT

Downstream 100 bases:

>100_bases
GATATGTCTTTGATGTGCCATTCCTGCATATAATGATTCATTCAGCTGATTAGGGAAGGTGACACAATTGAATGTGTATG
ACATCAGAATGGCTCCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MEQQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTVL
VLSQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDNSYGTDLIGV

Sequences:

>Translated_129_residues
MEQQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTVL
VLSQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDNSYGTDLIGV
>Mature_129_residues
MEQQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTVL
VLSQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDNSYGTDLIGV

Specific function: Unknown

COG id: COG4319

COG function: function code S; Ketosteroid isomerase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYBH_BACSU (P37496)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65989
- RefSeq:   NP_391944.1
- PDB:   2GXF
- PDBsum:   2GXF
- ProteinModelPortal:   P37496
- SMR:   P37496
- EnsemblBacteria:   EBBACT00000003626
- GeneID:   937866
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40640
- NMPDR:   fig|224308.1.peg.4070
- GenoList:   BSU40640
- HOGENOM:   HBG349045
- OMA:   YYAEDAA
- ProtClustDB:   CLSK866493
- BioCyc:   BSUB:BSU40640-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14570; Mature: 14570

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFN
CCHHHHHHHHHHHHEECCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC
HHIVPTQGKMILLEAGDTVLVLSQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDN
CCEECCCCCEEEEECCCEEEEEEHHHHCCCCCCHHHHHHHHHHEEEEECCCCCEEEEEEC
SYGTDLIGV
CCCCCCCCC
>Mature Secondary Structure
MEQQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFN
CCHHHHHHHHHHHHEECCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC
HHIVPTQGKMILLEAGDTVLVLSQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDN
CCEECCCCCEEEEECCCEEEEEEHHHHCCCCCCHHHHHHHHHHEEEEECCCCCEEEEEEC
SYGTDLIGV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377