Click here to switch to the map view.

The map label for this gene is cotF

Identifier: 16081105

GI number: 16081105

Start: 4167110

End: 4167592

Strand: Direct

Name: cotF

Synonym: BSU40530

Alternate gene names: 16081105

Gene position: 4167110-4167592 (Clockwise)

Preceding gene: 255767873

Following gene: 16081107

Centisome position: 98.85

GC content: 43.27

Gene sequence:

>483_bases
ATGGATGAACGCAGAACATTGGCTTGGCATGAAACATTAGAAATGCACGAGCTGGTTGCTTTTCAATCAAACGGACTCAT
TAAACTGAAGAAAATGATAAGAGAAGTAAAAGACCCTCAGCTCAGACAGCTTTATAACGTGTCTATTCAGGGTGTTGAGC
AAAATTTGAGAGAGCTTCTTCCGTTCTTTCCACAGGCTCCGCACAGAGAGGATGAGGAAGAAGAACGCGCAGATAACCCA
TTTTACAGCGGTGACCTGCTCGGTTTTGCCAAAACATCTGTCCGCAGCTATGCCATCGCAATTACAGAAACAGCAACACC
TCAATTAAGAAACGTACTGGTCAAACAGCTGAATGCTGCCATCCAGCTGCACGCCCAAGTTTATCGATACATGTATCAGC
ATGGATATTATCCGTCTTACAACCTTTCTGAACTGTTGAAAAACGATGTCAGAAACGCCAACAGAGCCATTTCAATGAAA
TAA

Upstream 100 bases:

>100_bases
AGGTGAATTTCCCTTTTTAAAAACTTCAAAACATCATGAACAACATTGAGCGTTGGGCATATGCTGATATGGAATCTGAT
CGATAAAGGAGAATTTTCAC

Downstream 100 bases:

>100_bases
AACAAGCAGCAAAGGAGTTCCCTTTGCTGCTATTTCTGCTGATCCTTCACTAAGCCGTTCGAACGATAAGATTCCAGCAC
GTCTCTGTTGGATTCTCCCC

Product: spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDERRTLAWHETLEMHELVAFQSNGLIKLKKMIREVKDPQLRQLYNVSIQGVEQNLRELLPFFPQAPHREDEEEERADNP
FYSGDLLGFAKTSVRSYAIAITETATPQLRNVLVKQLNAAIQLHAQVYRYMYQHGYYPSYNLSELLKNDVRNANRAISMK

Sequences:

>Translated_160_residues
MDERRTLAWHETLEMHELVAFQSNGLIKLKKMIREVKDPQLRQLYNVSIQGVEQNLRELLPFFPQAPHREDEEEERADNP
FYSGDLLGFAKTSVRSYAIAITETATPQLRNVLVKQLNAAIQLHAQVYRYMYQHGYYPSYNLSELLKNDVRNANRAISMK
>Mature_160_residues
MDERRTLAWHETLEMHELVAFQSNGLIKLKKMIREVKDPQLRQLYNVSIQGVEQNLRELLPFFPQAPHREDEEEERADNP
FYSGDLLGFAKTSVRSYAIAITETATPQLRNVLVKQLNAAIQLHAQVYRYMYQHGYYPSYNLSELLKNDVRNANRAISMK

Specific function: Unknown

COG id: COG5577

COG function: function code M; Spore coat protein

Gene ontology:

Cell location: Spore wall, spore coat

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COTF_BACSU (P23261)

Other databases:

- EMBL:   M58592
- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65978
- RefSeq:   NP_391933.1
- ProteinModelPortal:   P23261
- EnsemblBacteria:   EBBACT00000000678
- GeneID:   936671
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40530
- NMPDR:   fig|224308.1.peg.4059
- GenoList:   BSU40530
- GeneTree:   EBGT00050000001940
- HOGENOM:   HBG338526
- OMA:   AWHETLE
- ProtClustDB:   CLSK888199
- BioCyc:   BSUB:BSU40530-MONOMER
- InterPro:   IPR016493
- InterPro:   IPR012851
- PIRSF:   PIRSF006716

Pfam domain/function: PF07875 Coat_F

EC number: NA

Molecular weight: Translated: 18726; Mature: 18726

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERRTLAWHETLEMHELVAFQSNGLIKLKKMIREVKDPQLRQLYNVSIQGVEQNLRELL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
PFFPQAPHREDEEEERADNPFYSGDLLGFAKTSVRSYAIAITETATPQLRNVLVKQLNAA
HHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH
IQLHAQVYRYMYQHGYYPSYNLSELLKNDVRNANRAISMK
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDERRTLAWHETLEMHELVAFQSNGLIKLKKMIREVKDPQLRQLYNVSIQGVEQNLRELL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
PFFPQAPHREDEEEERADNPFYSGDLLGFAKTSVRSYAIAITETATPQLRNVLVKQLNAA
HHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH
IQLHAQVYRYMYQHGYYPSYNLSELLKNDVRNANRAISMK
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1708381; 7584024; 9384377