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The map label for this gene is yycB

Identifier: 16081100

GI number: 16081100

Start: 4159790

End: 4160998

Strand: Direct

Name: yycB

Synonym: BSU40480

Alternate gene names: 16081100

Gene position: 4159790-4160998 (Clockwise)

Preceding gene: 16081099

Following gene: 255767873

Centisome position: 98.68

GC content: 49.71

Gene sequence:

>1209_bases
TTGCCACATCCACATAATAAAAAAATCCAATCATTTTGGCTGATCACCGGCATTATCTTTATCGCCTTTAACTTACGGCC
CGCGATCACTTCAGTCGGTCCGGTCATCAGCTCTATCCGGGCAGAGCTGCACATGTCCAATGGGGCAGCCGGTTTTTTGA
CCGCACTGCCGCTGCTTTCGTTTGCAGTTCTTTCTCCGCTTGCACCTAAGCTTGGACAGCGCCTCGGTAATGAGCGAACT
TTATGGCTAGGTCTCGTGATACTGCTGATCGGTGTTCTGACTCGTTCTACCGGCTATACTGCCGCTTTGTTTTTCGGAAC
AGCACTTATCGGCGTCGGGATTGCGATTGGTAACGTACTTTTGCCAAGCTTAATCAAACATAAATACCCTGAAAAGCCAG
GGATCATGATCAGCCTGTATACGACATCAATGAATATATTCGCAGCTTTAGCATCGGGTGTCAGCGTTCCTTTAGCGACC
CAGATGAATGGCGGATGGAAACAAGCCTTTCTCTTATGGGGCGGGCTGGCTTTACTTGCATTGCTAATCTGGATACCTCA
GCTGCGCCATCGAGATACGGCAAACCAGACAATGAAGCTGCAATCCAGTTCCATTTGGGCTTCCAAAATGGCATGGTATG
TCACCATCTTTATGGGCCTGCAATCGTTTTTATTTTACAGCAGCATCGCTTGGTTTCCTGAAATTCTCCGTTCACACGGG
ATTGATACGGCAACAGCCGGATGGATGGTATCACTCATGCAATTTGCGAGTCTGCCTTCCACTTTTCTGACGCCAGTTTT
AGCTGACCGTGTGAAACAGCAGCGCGGTATCGTTGCGGCGCTGGCCTCAGTTTATCTGATCGGCCTTTGCGGATTATTAG
CGGGCGGAAGCCATACATTGCTTGCCATCTGGATGATCATTATCGGTATCGGACAAGGCTCCAGCATTAGTCTGGCCCTT
ACTTTGATTGGTCTCCGCAGTGAAAATGCCCAACAGGCCGCTGCGCTGTCAGGCATGTCTCAGTCATTCGGCTACCTGCT
GGCAGCAGTCGGGCCAATCTTTGTCGGCTATCTCTTTGACCAGACGCATTCTTGGACGATGCCGATTGTGCTTCTCATTG
CTGCCCTGATCGTAATGGGAGCAGCCGGACAGGGAGCCGGACGAGATCGATACATTTTCCAGTCAGAAAAACAAAGAAAT
TCAGCATAA

Upstream 100 bases:

>100_bases
TGAACTGCAAAAAGAGGACAAATCATAGCCTTCATTCACATACTTGCTTACCTGTTTCGGGATAATATCATGTATATGTT
AGAAAAGAGGAGTAACTGCT

Downstream 100 bases:

>100_bases
AGCGGGGAAGATATCTCCGCTTTTTTCTTTGAATATTTATGGTTTATTCATAAGTTTTTCATATTTGTTTTTTACAATGA
GACACCATAAAGAGGTGAAA

Product: anion ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MPHPHNKKIQSFWLITGIIFIAFNLRPAITSVGPVISSIRAELHMSNGAAGFLTALPLLSFAVLSPLAPKLGQRLGNERT
LWLGLVILLIGVLTRSTGYTAALFFGTALIGVGIAIGNVLLPSLIKHKYPEKPGIMISLYTTSMNIFAALASGVSVPLAT
QMNGGWKQAFLLWGGLALLALLIWIPQLRHRDTANQTMKLQSSSIWASKMAWYVTIFMGLQSFLFYSSIAWFPEILRSHG
IDTATAGWMVSLMQFASLPSTFLTPVLADRVKQQRGIVAALASVYLIGLCGLLAGGSHTLLAIWMIIIGIGQGSSISLAL
TLIGLRSENAQQAAALSGMSQSFGYLLAAVGPIFVGYLFDQTHSWTMPIVLLIAALIVMGAAGQGAGRDRYIFQSEKQRN
SA

Sequences:

>Translated_402_residues
MPHPHNKKIQSFWLITGIIFIAFNLRPAITSVGPVISSIRAELHMSNGAAGFLTALPLLSFAVLSPLAPKLGQRLGNERT
LWLGLVILLIGVLTRSTGYTAALFFGTALIGVGIAIGNVLLPSLIKHKYPEKPGIMISLYTTSMNIFAALASGVSVPLAT
QMNGGWKQAFLLWGGLALLALLIWIPQLRHRDTANQTMKLQSSSIWASKMAWYVTIFMGLQSFLFYSSIAWFPEILRSHG
IDTATAGWMVSLMQFASLPSTFLTPVLADRVKQQRGIVAALASVYLIGLCGLLAGGSHTLLAIWMIIIGIGQGSSISLAL
TLIGLRSENAQQAAALSGMSQSFGYLLAAVGPIFVGYLFDQTHSWTMPIVLLIAALIVMGAAGQGAGRDRYIFQSEKQRN
SA
>Mature_401_residues
PHPHNKKIQSFWLITGIIFIAFNLRPAITSVGPVISSIRAELHMSNGAAGFLTALPLLSFAVLSPLAPKLGQRLGNERTL
WLGLVILLIGVLTRSTGYTAALFFGTALIGVGIAIGNVLLPSLIKHKYPEKPGIMISLYTTSMNIFAALASGVSVPLATQ
MNGGWKQAFLLWGGLALLALLIWIPQLRHRDTANQTMKLQSSSIWASKMAWYVTIFMGLQSFLFYSSIAWFPEILRSHGI
DTATAGWMVSLMQFASLPSTFLTPVLADRVKQQRGIVAALASVYLIGLCGLLAGGSHTLLAIWMIIIGIGQGSSISLALT
LIGLRSENAQQAAALSGMSQSFGYLLAAVGPIFVGYLFDQTHSWTMPIVLLIAALIVMGAAGQGAGRDRYIFQSEKQRNS
A

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family

Homologues:

Organism=Escherichia coli, GI1788092, Length=382, Percent_Identity=42.1465968586387, Blast_Score=258, Evalue=5e-70,
Organism=Escherichia coli, GI1786536, Length=342, Percent_Identity=26.6081871345029, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYCB_BACSU (P37482)

Other databases:

- EMBL:   D26185
- EMBL:   AL009126
- PIR:   S65973
- RefSeq:   NP_391928.1
- ProteinModelPortal:   P37482
- EnsemblBacteria:   EBBACT00000002286
- GeneID:   937777
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40480
- NMPDR:   fig|224308.1.peg.4054
- GenoList:   BSU40480
- GeneTree:   EBGT00050000000133
- HOGENOM:   HBG696945
- OMA:   SILIGRG
- PhylomeDB:   P37482
- ProtClustDB:   CLSK888197
- BioCyc:   BSUB:BSU40480-MONOMER
- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- TIGRFAMs:   TIGR00896

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 43185; Mature: 43054

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x135133ac)-; HASH(0x139272c8)-; HASH(0x40c08b6c)-; HASH(0x13a4316c)-; HASH(0x1285ad58)-; HASH(0x1347d2a8)-; HASH(0x13027294)-; HASH(0x12d3afe8)-; HASH(0x13108bd4)-; HASH(0x13483a48)-; HASH(0xd132f0c)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPHNKKIQSFWLITGIIFIAFNLRPAITSVGPVISSIRAELHMSNGAAGFLTALPLLS
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
FAVLSPLAPKLGQRLGNERTLWLGLVILLIGVLTRSTGYTAALFFGTALIGVGIAIGNVL
HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LPSLIKHKYPEKPGIMISLYTTSMNIFAALASGVSVPLATQMNGGWKQAFLLWGGLALLA
HHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHH
LLIWIPQLRHRDTANQTMKLQSSSIWASKMAWYVTIFMGLQSFLFYSSIAWFPEILRSHG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IDTATAGWMVSLMQFASLPSTFLTPVLADRVKQQRGIVAALASVYLIGLCGLLAGGSHTL
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAIWMIIIGIGQGSSISLALTLIGLRSENAQQAAALSGMSQSFGYLLAAVGPIFVGYLFD
HHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTHSWTMPIVLLIAALIVMGAAGQGAGRDRYIFQSEKQRNSA
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHCCCH
>Mature Secondary Structure 
PHPHNKKIQSFWLITGIIFIAFNLRPAITSVGPVISSIRAELHMSNGAAGFLTALPLLS
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
FAVLSPLAPKLGQRLGNERTLWLGLVILLIGVLTRSTGYTAALFFGTALIGVGIAIGNVL
HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LPSLIKHKYPEKPGIMISLYTTSMNIFAALASGVSVPLATQMNGGWKQAFLLWGGLALLA
HHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHH
LLIWIPQLRHRDTANQTMKLQSSSIWASKMAWYVTIFMGLQSFLFYSSIAWFPEILRSHG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IDTATAGWMVSLMQFASLPSTFLTPVLADRVKQQRGIVAALASVYLIGLCGLLAGGSHTL
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAIWMIIIGIGQGSSISLALTLIGLRSENAQQAAALSGMSQSFGYLLAAVGPIFVGYLFD
HHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTHSWTMPIVLLIAALIVMGAAGQGAGRDRYIFQSEKQRNSA
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377