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The map label for this gene is yxaI

Identifier: 16081048

GI number: 16081048

Start: 4104444

End: 4104899

Strand: Direct

Name: yxaI

Synonym: BSU39960

Alternate gene names: 16081048

Gene position: 4104444-4104899 (Clockwise)

Preceding gene: 255767857

Following gene: 50812310

Centisome position: 97.36

GC content: 38.82

Gene sequence:

>456_bases
ATGGAAAAACCAGCAGGATTTTGGATTCGTTTTTTAGCTTATTTTATTGACGGCATTATTGTATCTGTTCCTAGTTATAT
TATTCTATTTATTATCAATTCTGTGTTTGTAGCTGGGGCTGTGGCAACAAACCCTTACATGACGGAAGAAGAGTATTTAG
TGAAATACATGACGCTTGCATTTTTGCCTACTATGCTGATCATGATCGTCATCAGCGTGTTATATTACGGGCTGCTCACA
GCTTCTAAAATGCAAGGCACACTTGGCAAAAAAATTCTTGGCCTGAAAGTGGTCAATGAACAAGGTGAACGGGTTTCTGT
CGGACAGGGAATTGGCCGTTACTTTGCCTATATCTTATCTGGAATCATCTTTTATATCGGGTTTATCATGATCGCCTTTG
GAGAGAAAAAAGGCCTGCATGACATCATTTGCAAAACACGTGTCGTGTATAAATAA

Upstream 100 bases:

>100_bases
TTTTTCTGTAATATCAGGATTTTATCACCATACCATATTGCATGTACATGTTTTTCAAAGTATACTATTCCAGATTAATT
CAGAGGAGAGAGAAAAATAC

Downstream 100 bases:

>100_bases
TAGAAAAAAGTCTAGACGCCAATAGGCATCTAGACTTTTGTTTTCTTTGCAATAGGCTGCCACGACAGATACGTAGCGCT
TCTCCACAACCACTCAAACG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MEKPAGFWIRFLAYFIDGIIVSVPSYIILFIINSVFVAGAVATNPYMTEEEYLVKYMTLAFLPTMLIMIVISVLYYGLLT
ASKMQGTLGKKILGLKVVNEQGERVSVGQGIGRYFAYILSGIIFYIGFIMIAFGEKKGLHDIICKTRVVYK

Sequences:

>Translated_151_residues
MEKPAGFWIRFLAYFIDGIIVSVPSYIILFIINSVFVAGAVATNPYMTEEEYLVKYMTLAFLPTMLIMIVISVLYYGLLT
ASKMQGTLGKKILGLKVVNEQGERVSVGQGIGRYFAYILSGIIFYIGFIMIAFGEKKGLHDIICKTRVVYK
>Mature_151_residues
MEKPAGFWIRFLAYFIDGIIVSVPSYIILFIINSVFVAGAVATNPYMTEEEYLVKYMTLAFLPTMLIMIVISVLYYGLLT
ASKMQGTLGKKILGLKVVNEQGERVSVGQGIGRYFAYILSGIIFYIGFIMIAFGEKKGLHDIICKTRVVYK

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXAI_BACSU (P42108)

Other databases:

- EMBL:   AB005554
- EMBL:   AL009126
- PIR:   H70071
- RefSeq:   NP_391876.1
- ProteinModelPortal:   P42108
- EnsemblBacteria:   EBBACT00000002993
- GeneID:   937676
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39960
- NMPDR:   fig|224308.1.peg.4002
- GenoList:   BSU39960
- GeneTree:   EBGT00050000001361
- HOGENOM:   HBG751082
- OMA:   TASKMQG
- ProtClustDB:   CLSK2301491
- BioCyc:   BSUB:BSU39960-MONOMER
- InterPro:   IPR010432

Pfam domain/function: PF06271 RDD

EC number: NA

Molecular weight: Translated: 16947; Mature: 16947

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13aac2bc)-; HASH(0x136b02e0)-; HASH(0x12829ac0)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPAGFWIRFLAYFIDGIIVSVPSYIILFIINSVFVAGAVATNPYMTEEEYLVKYMTLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FLPTMLIMIVISVLYYGLLTASKMQGTLGKKILGLKVVNEQGERVSVGQGIGRYFAYILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHH
GIIFYIGFIMIAFGEKKGLHDIICKTRVVYK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
>Mature Secondary Structure
MEKPAGFWIRFLAYFIDGIIVSVPSYIILFIINSVFVAGAVATNPYMTEEEYLVKYMTLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FLPTMLIMIVISVLYYGLLTASKMQGTLGKKILGLKVVNEQGERVSVGQGIGRYFAYILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHH
GIIFYIGFIMIAFGEKKGLHDIICKTRVVYK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377