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The map label for this gene is yxeN

Identifier: 16081000

GI number: 16081000

Start: 4058791

End: 4059465

Strand: Reverse

Name: yxeN

Synonym: BSU39490

Alternate gene names: 16081000

Gene position: 4059465-4058791 (Counterclockwise)

Preceding gene: 16081001

Following gene: 16080999

Centisome position: 96.3

GC content: 45.93

Gene sequence:

>675_bases
ATGAACACGATTGATTGGGAATTCATGATATCAGCGTTCCCGACTTTAATTCAGGCCCTTCCGATCACCTTGTTTATGGC
AATAGCAGCTATGATTTTTGCCATTATCGGAGGACTTATTCTCGCACTCATTACAAAAAACAAAATTCCAGTGCTTCATC
AGCTGTCAAAGCTGTATATATCCTTTTTCCGAGGCGTGCCGACACTTGTACAGCTGTTCTTAATCTATTACGGGCTGCCG
CAGCTATTTCCAGAGATGAGCAAAATGACAGCTCTCACAGCTGCCATCATCGGGTTAAGCTTAAAAAACGCAGCTTATTT
GGCAGAAATCTTCCGGGCCGCCCTCAATTCTGTTGATGACGGGCAGCTGGAGGCGTGCCTGTCTGTCGGTATGACAAAAT
TTCAGGCATACAGACGGATTATTTTGCCGCAAGCGATCCGAAATGCGATTCCGGCAACGGGCAATACATTTATCGGGCTC
CTGAAAGAAACGTCACTGGCCTTTACATTAGGGGTCATGGAGATGTTCGCCCAAGGGAAGATGTACGCTTCAGGAAACCT
CAAATATTTTGAGACGTATTTGGCGGTTGCGATCGTCTATTGGGTTCTTACCATTATCTACAGCATTTTGCAGGACTTGT
TTGAACGTGCCATGAGCAAGCCATACCGGACTTAG

Upstream 100 bases:

>100_bases
TTGCGTAAAGACGGAACACTGAAAAAACTCTCTGAAAAATACTTTAATGAAGATATCACAGTAGAACAGAAGCATTAAGA
AACGGCGGTGACTCACCAGA

Downstream 100 bases:

>100_bases
AGGTGAAATCAGTTGATAACAGTAAAAAATATTCGCAAAGCGTTTAAAGATCTCGTCGTGCTCGACGGAATCGATCTAGA
AGTGAAACGCGGAGAAGTGG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNTIDWEFMISAFPTLIQALPITLFMAIAAMIFAIIGGLILALITKNKIPVLHQLSKLYISFFRGVPTLVQLFLIYYGLP
QLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGL
LKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWVLTIIYSILQDLFERAMSKPYRT

Sequences:

>Translated_224_residues
MNTIDWEFMISAFPTLIQALPITLFMAIAAMIFAIIGGLILALITKNKIPVLHQLSKLYISFFRGVPTLVQLFLIYYGLP
QLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGL
LKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWVLTIIYSILQDLFERAMSKPYRT
>Mature_224_residues
MNTIDWEFMISAFPTLIQALPITLFMAIAAMIFAIIGGLILALITKNKIPVLHQLSKLYISFFRGVPTLVQLFLIYYGLP
QLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGL
LKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWVLTIIYSILQDLFERAMSKPYRT

Specific function: Probably part of the ABC transporter complex yxeMNO that could be involved in amino-acid import. May transport S- methylcysteine. Probably responsible for the translocation of the substrate across the membrane (Probable)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=44.2396313364055, Blast_Score=184, Evalue=3e-48,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=31.6279069767442, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=33.7962962962963, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=31.1881188118812, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1786873, Length=221, Percent_Identity=28.9592760180996, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786874, Length=210, Percent_Identity=29.5238095238095, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=29.9065420560748, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788645, Length=213, Percent_Identity=32.8638497652582, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1787087, Length=215, Percent_Identity=26.9767441860465, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI48994930, Length=141, Percent_Identity=30.4964539007092, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXEN_BACSU (P54953)

Other databases:

- EMBL:   D45912
- EMBL:   AL009126
- PIR:   H70075
- RefSeq:   NP_391828.1
- ProteinModelPortal:   P54953
- EnsemblBacteria:   EBBACT00000000757
- GeneID:   937554
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39490
- NMPDR:   fig|224308.1.peg.3954
- GenoList:   BSU39490
- GeneTree:   EBGT00070000031800
- HOGENOM:   HBG704821
- OMA:   GTTMEMA
- PhylomeDB:   P54953
- ProtClustDB:   CLSK888156
- BioCyc:   BSUB:BSU39490-MONOMER
- InterPro:   IPR010065
- InterPro:   IPR000515
- TIGRFAMs:   TIGR01726

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 25007; Mature: 25007

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13417f28)-; HASH(0x123dbab8)-; HASH(0x135a0470)-; HASH(0x11bf4318)-; HASH(0x134cf8b4)-; HASH(0x1355de0c)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIDWEFMISAFPTLIQALPITLFMAIAAMIFAIIGGLILALITKNKIPVLHQLSKLYI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SFFRGVPTLVQLFLIYYGLPQLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDD
HHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GQLEACLSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
MYASGNLKYFETYLAVAIVYWVLTIIYSILQDLFERAMSKPYRT
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MNTIDWEFMISAFPTLIQALPITLFMAIAAMIFAIIGGLILALITKNKIPVLHQLSKLYI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SFFRGVPTLVQLFLIYYGLPQLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDD
HHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GQLEACLSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
MYASGNLKYFETYLAVAIVYWVLTIIYSILQDLFERAMSKPYRT
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377