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The map label for this gene is yxxF

Identifier: 16080975

GI number: 16080975

Start: 4030710

End: 4031645

Strand: Reverse

Name: yxxF

Synonym: BSU39240

Alternate gene names: 16080975

Gene position: 4031645-4030710 (Counterclockwise)

Preceding gene: 16080976

Following gene: 255767831

Centisome position: 95.64

GC content: 45.51

Gene sequence:

>936_bases
ATGCAACAGGATCCTTCCATATCGTCAAAACAAAAATCAACAGCCGTAATCAAAATGGTCATCTCTATGGTGATTTTCGG
CTCCATCGGCTTTTTCTCAGAGCATACCAATCTGCCGTCATTTGAATTGGTCTTTGTCCGCTGCCTTTGCGCGACGCTGT
TTTTAGGCTTTTGCTGGCTGGCGTCCGGCCAGTATAAAACTGAAAAATGGAGCAAGAGAGACGTGCTGCAAACATTGGCG
TGCGGTTTCTTTCTTGTATTCAACTGGGTGTTCTTATTTAAGTCTTTTGAAGAAACGTCCGTTACAATTGCCATCTCTGT
TTATCATCTAGCGCCGGTGCTTGTTCTTCTTCTGGGGAGCTTCTTCTACAGAGAGAAATTAAATGTGATCTCCGTCAGCT
CCATTATCATCTGCTTTCTTGGGACTGCGCTGATTTCCGGGATTAACGGCAGCACATCATTGACACAGCTGATGGGATCA
GGGATCATATGGGCAGTTCTCGCCGCACTGTTTTATGCGTTCACCACTTTATTGGGAAAAGGCATTCACAATCTCAGTCC
TTACACGACCACCTTCTTGCAGACAGGTTTAGGGGTTATCATCCTGATTCCGTTTATTCACTTTGGCGCTTTTGCGGACC
TATCTCAGGGAAACTGGATTATGGTGGTATCTACCGGCATCATCCATACGGGTATTGTATATTTGCTGTTTTTTGACAGT
TTACGATTTTTATCAACGAAATTTATTTCAATCATTGTATTTCTCGACCCCGCTGTCGCGATCGTGCTCGATACCGTCTT
CACAGGCTTCCGCCCTGACCTCTATCAAACGCTTGGCATCGTAATGATCTTTGCGGGCATGGCCTTGACGCTTGTCAGGA
GGCAGGGGAAGGCGAATGTGACAGCTGAGGGTACGGATATTGAACAAATACAATAA

Upstream 100 bases:

>100_bases
TTATAATATCTACATGTAAAAAAGAGGAATTCTATGTGTAGATTTCTGAATTCACAAAAAACAGTTTATGCTATGCAGTA
TTGGAGGTAGAATACGTTTG

Downstream 100 bases:

>100_bases
AAAATGTAAAAAGGCCTATGCGGCCTTTTTTTGTTTTAGGTCAATTGACTCTCGCTAATCCTTAAAATAAGATAAATTTT
CTAGAAAAATATTGTAATGA

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MQQDPSISSKQKSTAVIKMVISMVIFGSIGFFSEHTNLPSFELVFVRCLCATLFLGFCWLASGQYKTEKWSKRDVLQTLA
CGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSFFYREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGS
GIIWAVLAALFYAFTTLLGKGIHNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDS
LRFLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRRQGKANVTAEGTDIEQIQ

Sequences:

>Translated_311_residues
MQQDPSISSKQKSTAVIKMVISMVIFGSIGFFSEHTNLPSFELVFVRCLCATLFLGFCWLASGQYKTEKWSKRDVLQTLA
CGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSFFYREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGS
GIIWAVLAALFYAFTTLLGKGIHNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDS
LRFLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRRQGKANVTAEGTDIEQIQ
>Mature_311_residues
MQQDPSISSKQKSTAVIKMVISMVIFGSIGFFSEHTNLPSFELVFVRCLCATLFLGFCWLASGQYKTEKWSKRDVLQTLA
CGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSFFYREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGS
GIIWAVLAALFYAFTTLLGKGIHNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDS
LRFLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRRQGKANVTAEGTDIEQIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXXF_BACSU (Q07835)

Other databases:

- EMBL:   D31856
- EMBL:   D29985
- EMBL:   AL009126
- EMBL:   L05634
- PIR:   B70083
- RefSeq:   NP_391803.1
- ProteinModelPortal:   Q07835
- EnsemblBacteria:   EBBACT00000003914
- GeneID:   937510
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39240
- NMPDR:   fig|224308.1.peg.3929
- GenoList:   BSU39240
- GeneTree:   EBGT00050000001295
- HOGENOM:   HBG337284
- OMA:   VANWLLL
- ProtClustDB:   CLSK888143
- BioCyc:   BSUB:BSU39240-MONOMER
- GO:   GO:0006810
- InterPro:   IPR000620

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 34310; Mature: 34310

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13536ca0)-; HASH(0x1339d02c)-; HASH(0x10ecb484)-; HASH(0x132b1cb8)-; HASH(0x12aa4248)-; HASH(0x11f3025c)-; HASH(0x123b684c)-; HASH(0x1329c1ac)-; HASH(0x12e14e0c)-; HASH(0xdc7856c)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQDPSISSKQKSTAVIKMVISMVIFGSIGFFSEHTNLPSFELVFVRCLCATLFLGFCWL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ASGQYKTEKWSKRDVLQTLACGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH
FFYREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGSGIIWAVLAALFYAFTTLLGK
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GIHNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDS
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
LRFLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRRQGKANV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TAEGTDIEQIQ
EECCCCHHHCH
>Mature Secondary Structure
MQQDPSISSKQKSTAVIKMVISMVIFGSIGFFSEHTNLPSFELVFVRCLCATLFLGFCWL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ASGQYKTEKWSKRDVLQTLACGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH
FFYREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGSGIIWAVLAALFYAFTTLLGK
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GIHNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDS
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
LRFLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRRQGKANV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TAEGTDIEQIQ
EECCCCHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377; 8316082