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The map label for this gene is ywcE

Identifier: 16080864

GI number: 16080864

Start: 3914009

End: 3914272

Strand: Direct

Name: ywcE

Synonym: BSU38130

Alternate gene names: 16080864

Gene position: 3914009-3914272 (Clockwise)

Preceding gene: 16080860

Following gene: 255767808

Centisome position: 92.85

GC content: 42.42

Gene sequence:

>264_bases
ATGATGGACATGTTTTTTGCTTACTTATTGGTTGCCAGCGCAACGCCTCTCTTTATTTGGCTTGATAACAAAAAAGTCGC
ACTCTCAGCTATTCCGCCAATCATTTTAATGTGGGTATTCTTCTTCTTTTACGCAACAGAAAGCCTTTCTCCACTTGGAC
ACACTCTCATGATTATCTTGTTTGCCGTTAACGTCATTGTCGCTCATATCGCCGCATTTATCATTTACGGCCTTCCGTAT
CTTCGCAGAAAGCGAAGCAGCTGA

Upstream 100 bases:

>100_bases
AATTGTAACAGAATGTTCAAAAAACAATCACAAAACAGACACAACTCAGTTCCTCTATTTCATTTTTGTAAACGTTATCA
CAAAATGAAAGGAGACGGGT

Downstream 100 bases:

>100_bases
AGACAGCAAAAAACCCTCTTCCACTGAAGAGGGTTTTTTGTATTATTCGTTATGGCCTGAATGCTCTGAGTGTTCAGCGC
CTCCAGGAGGATTTCCGTCC

Product: protein required for proper spore morphogenesis and germination

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MMDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFFFYATESLSPLGHTLMIILFAVNVIVAHIAAFIIYGLPY
LRRKRSS

Sequences:

>Translated_87_residues
MMDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFFFYATESLSPLGHTLMIILFAVNVIVAHIAAFIIYGLPY
LRRKRSS
>Mature_87_residues
MMDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFFFYATESLSPLGHTLMIILFAVNVIVAHIAAFIIYGLPY
LRRKRSS

Specific function: Required for proper spore morphogenesis. Important for spore germination

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane. Spore core membrane; Multi- pass membrane protein. Spore wall, spore outer membrane; Multi- pass membrane protein. Note=Inner and outer prespore membrane. Mother cell membrane

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ywcE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWCE_BACSU (P39603)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39696
- RefSeq:   NP_391692.1
- ProteinModelPortal:   P39603
- EnsemblBacteria:   EBBACT00000002455
- GeneID:   937296
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38130
- NMPDR:   fig|224308.1.peg.3818
- GenoList:   BSU38130
- GeneTree:   EBGT00050000002016
- HOGENOM:   HBG338452
- OMA:   DMFFAYL
- ProtClustDB:   CLSK873212
- BioCyc:   BSUB:BSU38130-MONOMER
- InterPro:   IPR020185
- ProDom:   PD062384

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9959; Mature: 9959

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x128b7db4)-; HASH(0x12f6ed80)-; HASH(0x121c1ec8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFFFYATESLSPLGHTLMIIL
CHHHHHHHHHHHCCCCEEEEECCCEEEHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FAVNVIVAHIAAFIIYGLPYLRRKRSS
HHHHHHHHHHHHHHHHCCHHHHHCCCH
>Mature Secondary Structure
MMDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFFFYATESLSPLGHTLMIIL
CHHHHHHHHHHHCCCCEEEEECCCEEEHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FAVNVIVAHIAAFIIYGLPYLRRKRSS
HHHHHHHHHHHHHHHHCCHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377