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The map label for this gene is ywfM

Identifier: 16080815

GI number: 16080815

Start: 3862357

End: 3863247

Strand: Reverse

Name: ywfM

Synonym: BSU37630

Alternate gene names: 16080815

Gene position: 3863247-3862357 (Counterclockwise)

Preceding gene: 16080816

Following gene: 16080813

Centisome position: 91.64

GC content: 52.41

Gene sequence:

>891_bases
ATGAAGGGGAATATTTACAGCCTTTTTGTATTGATTGCGGCTTTTTTCTGGGGGACCACGGGAACCGTTCAGGCATTGGC
TCCAGAAAGCGCCACACCGCTGGCATTTGGAGCGTTCAGGTTATTAATAGGAGGAAGCGCCATGCTGCTTGCGGTTTGGA
TCAGCCGGGAGCTTCACGTGAAAAATTGGGCATGGCCGCTCGTATTTTTAGCCGCTGTTTGTATGGCGTGTTACCAGCCG
CTGTTTTTCACAGCGGTTAAAGAAACGGGAATTGCAGTGGGAACTGTGATTGCCATCGGCAGTGCGCCTATCATTGCCGG
GACCCTCGAATGGGCTGTATTGAAGAAACGCCCGCGAAACTCCTGGTGGATTGCGACTGTGCTGGCTTTAGCGGGTTGCT
GGCTTCTGTTTTCCGACAGTTCCAATGTTCGGATTGATGTGGCTGGTGTTCTTATGGCGCTTGGAGCGGGTGCTTCTTTT
GCAGGCTATACGCTCATCAGTAAAGCGATGATGAAAACCCAGCCTCCGCGAGCGACCTCCGCCGTTGTATTCATGATCAG
CGCCATCTTGCTGACGCCGCTATTATGGCAGTTAGATATCTCGTGGATATTGACCCCTAGAGGACTGGGAACAAGCCTTT
ACATCGGGTTAATTGCAACATGTGCCGCATACTTTTTGTTTGCGAAAGGGCTTACCGGGGTTCCGGCCTCGGCGGCGGTC
ACGCTGTCTTTAGCTGAACCGCTGACGGCTTCATTGCTTGGCGTGTTTTTCATAGGGGAAATGCTTTCGCCTTCCTCGTG
GCTGGGCATTGCGCTTATGATGCTGGGGCTTTTGGTCATTTCTGCTGCGCCTCGGAAACAAAAAACGGCCGAGGCAGCTC
ACATGTCTTAA

Upstream 100 bases:

>100_bases
TAATCTTATTTTCAGATAAGTCCTTCTTACATACAGATAACCACGACAAAAAGAAAAACGATAAAATGACATCAGCATCC
ATATTAAAGGGGAGAGGCAG

Downstream 100 bases:

>100_bases
TAGATTCACATAAGCTTGGCCTCATTTTACAAGAATAGCTGATCCGGCTGCAAAATGAGGAAATTCTCTTTTCTCAATAG
AAAAGGGGATTTTGCACATG

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKGNIYSLFVLIAAFFWGTTGTVQALAPESATPLAFGAFRLLIGGSAMLLAVWISRELHVKNWAWPLVFLAAVCMACYQP
LFFTAVKETGIAVGTVIAIGSAPIIAGTLEWAVLKKRPRNSWWIATVLALAGCWLLFSDSSNVRIDVAGVLMALGAGASF
AGYTLISKAMMKTQPPRATSAVVFMISAILLTPLLWQLDISWILTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAV
TLSLAEPLTASLLGVFFIGEMLSPSSWLGIALMMLGLLVISAAPRKQKTAEAAHMS

Sequences:

>Translated_296_residues
MKGNIYSLFVLIAAFFWGTTGTVQALAPESATPLAFGAFRLLIGGSAMLLAVWISRELHVKNWAWPLVFLAAVCMACYQP
LFFTAVKETGIAVGTVIAIGSAPIIAGTLEWAVLKKRPRNSWWIATVLALAGCWLLFSDSSNVRIDVAGVLMALGAGASF
AGYTLISKAMMKTQPPRATSAVVFMISAILLTPLLWQLDISWILTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAV
TLSLAEPLTASLLGVFFIGEMLSPSSWLGIALMMLGLLVISAAPRKQKTAEAAHMS
>Mature_296_residues
MKGNIYSLFVLIAAFFWGTTGTVQALAPESATPLAFGAFRLLIGGSAMLLAVWISRELHVKNWAWPLVFLAAVCMACYQP
LFFTAVKETGIAVGTVIAIGSAPIIAGTLEWAVLKKRPRNSWWIATVLALAGCWLLFSDSSNVRIDVAGVLMALGAGASF
AGYTLISKAMMKTQPPRATSAVVFMISAILLTPLLWQLDISWILTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAV
TLSLAEPLTASLLGVFFIGEMLSPSSWLGIALMMLGLLVISAAPRKQKTAEAAHMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWFM_BACSU (P39649)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39746
- RefSeq:   NP_391643.1
- ProteinModelPortal:   P39649
- EnsemblBacteria:   EBBACT00000002612
- GeneID:   937972
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37630
- NMPDR:   fig|224308.1.peg.3769
- GenoList:   BSU37630
- GeneTree:   EBGT00050000001291
- HOGENOM:   HBG728173
- OMA:   RHISGAT
- ProtClustDB:   CLSK2752552
- BioCyc:   BSUB:BSU37630-MONOMER
- GO:   GO:0006810
- InterPro:   IPR004779
- InterPro:   IPR000620
- TIGRFAMs:   TIGR00950

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 31346; Mature: 31346

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1317ebc4)-; HASH(0x1223ff88)-; HASH(0x12f86420)-; HASH(0x12da67c8)-; HASH(0x130bd200)-; HASH(0xf654db0)-; HASH(0xe1e143c)-; HASH(0x1308efc0)-; HASH(0x130ca008)-; HASH(0x12871530)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGNIYSLFVLIAAFFWGTTGTVQALAPESATPLAFGAFRLLIGGSAMLLAVWISRELHV
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHCHHCC
KNWAWPLVFLAAVCMACYQPLFFTAVKETGIAVGTVIAIGSAPIIAGTLEWAVLKKRPRN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCEEHHHHHHHHHHCCCCC
SWWIATVLALAGCWLLFSDSSNVRIDVAGVLMALGAGASFAGYTLISKAMMKTQPPRATS
CHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH
AVVFMISAILLTPLLWQLDISWILTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAV
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHEE
TLSLAEPLTASLLGVFFIGEMLSPSSWLGIALMMLGLLVISAAPRKQKTAEAAHMS
EEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH
>Mature Secondary Structure
MKGNIYSLFVLIAAFFWGTTGTVQALAPESATPLAFGAFRLLIGGSAMLLAVWISRELHV
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHCHHCC
KNWAWPLVFLAAVCMACYQPLFFTAVKETGIAVGTVIAIGSAPIIAGTLEWAVLKKRPRN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCEEHHHHHHHHHHCCCCC
SWWIATVLALAGCWLLFSDSSNVRIDVAGVLMALGAGASFAGYTLISKAMMKTQPPRATS
CHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH
AVVFMISAILLTPLLWQLDISWILTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAV
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHEE
TLSLAEPLTASLLGVFFIGEMLSPSSWLGIALMMLGLLVISAAPRKQKTAEAAHMS
EEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377