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The map label for this gene is rsfA

Identifier: 16080814

GI number: 16080814

Start: 3861437

End: 3862213

Strand: Direct

Name: rsfA

Synonym: BSU37620

Alternate gene names: 16080814

Gene position: 3861437-3862213 (Clockwise)

Preceding gene: 16080806

Following gene: 161511066

Centisome position: 91.6

GC content: 44.4

Gene sequence:

>777_bases
ATGACAAAACAGCGACAAGACGCTTGGTCAGAGGAAAACGATCTGCTTTTAGCCGAAACAGTGCTTCGGCATGTGAGGGA
GGGCAGCACTCAGCTGAACGCCTTTGAAGAAGTCGGCGATAAATTAAACCGGACATCCGCAGCCTGCGGATTCAGATGGA
ACGCAGTGGTCCGCCATCAATATGAAAAAGCGCTTCAGCTTGCGAAGAAACAACGAAAACAGCGGATGAGAGCGCTCGGA
AACGGGCAGCCCGCGAAAAAAAGATTATTATATCAGCCTCCTGCCGTTGATCCTGAAATCATTCAAGAAACCGCTGCAGA
AGAGCCGGTTAAAACGGAAACACCATCTGTCGAAAATGAGCAACCTTTAATGTCTGGCGAACACATGCCTTTTGTTGATG
AAAGCTTTAAGGAAGAGTTAGCTAGTCTATCACACTTATTGTCTCCTCAAACGCCTGCAGCTGCGCCTGAGATGACGATG
AATGATGTGATCCGCTTCCTGCAGAATTACGAAGGCAATCACGAGCAATCATCAGCATTAAAAATGGAAAACGAGCGTTT
AAAGAAAGAAAATCAGGAATTGCAAAACAAAACAGAGCAGCTAGAGGCAGAAGTTCAAAAGCTTGAAAAAGACCAAAAAA
CGATCCAAGAAGATTATGAAACCTTGGTGAAAATTATGAACAGAGCCAGAAAGCTAGTTTTATTTGAAGAAGATGAACAT
GCCTCTCCGTCCTTCAAAATGGACCGGAACGGCAATTTAGAAAAATTAGCGGAATGA

Upstream 100 bases:

>100_bases
CTCCATCCTTCGTATCTCCTATTCTTTCAGCCAATTTGTATAAATATTTTCCAACCTGGACATTCTAATACCATGAAAAG
AAAAATGGGAGTTGAGATAA

Downstream 100 bases:

>100_bases
CATAGAAAAATCCCAAAACGGGCAGCTGTTTTGGGATTTTCGCCATGTGCAAAATCCCCTTTTCTATTGAGAAAAGAGAA
TTTCCTCATTTTGCAGCCGG

Product: prespore-specific regulatory gene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHQYEKALQLAKKQRKQRMRALG
NGQPAKKRLLYQPPAVDPEIIQETAAEEPVKTETPSVENEQPLMSGEHMPFVDESFKEELASLSHLLSPQTPAAAPEMTM
NDVIRFLQNYEGNHEQSSALKMENERLKKENQELQNKTEQLEAEVQKLEKDQKTIQEDYETLVKIMNRARKLVLFEEDEH
ASPSFKMDRNGNLEKLAE

Sequences:

>Translated_258_residues
MTKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHQYEKALQLAKKQRKQRMRALG
NGQPAKKRLLYQPPAVDPEIIQETAAEEPVKTETPSVENEQPLMSGEHMPFVDESFKEELASLSHLLSPQTPAAAPEMTM
NDVIRFLQNYEGNHEQSSALKMENERLKKENQELQNKTEQLEAEVQKLEKDQKTIQEDYETLVKIMNRARKLVLFEEDEH
ASPSFKMDRNGNLEKLAE
>Mature_257_residues
TKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHQYEKALQLAKKQRKQRMRALGN
GQPAKKRLLYQPPAVDPEIIQETAAEEPVKTETPSVENEQPLMSGEHMPFVDESFKEELASLSHLLSPQTPAAAPEMTMN
DVIRFLQNYEGNHEQSSALKMENERLKKENQELQNKTEQLEAEVQKLEKDQKTIQEDYETLVKIMNRARKLVLFEEDEHA
SPSFKMDRNGNLEKLAE

Specific function: Seems to improve the efficiency of sporulation by fine- tuning the expression of genes in the sigma F regulon, particularly the timing of their expression. Negatively regulates spoIIR and its own synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Myb-like domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSFA_BACSU (P39650)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39747
- RefSeq:   NP_391642.1
- ProteinModelPortal:   P39650
- EnsemblBacteria:   EBBACT00000001721
- GeneID:   937126
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37620
- NMPDR:   fig|224308.1.peg.3768
- GenoList:   BSU37620
- GeneTree:   EBGT00050000001550
- HOGENOM:   HBG340913
- OMA:   KQRQDAW
- ProtClustDB:   CLSK2502635
- BioCyc:   BSUB:BSU37620-MONOMER
- GO:   GO:0006350
- InterPro:   IPR014243
- InterPro:   IPR017877
- TIGRFAMs:   TIGR02894

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29729; Mature: 29598

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50090 MYB_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHQ
CCCCCHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YEKALQLAKKQRKQRMRALGNGQPAKKRLLYQPPAVDPEIIQETAAEEPVKTETPSVENE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
QPLMSGEHMPFVDESFKEELASLSHLLSPQTPAAAPEMTMNDVIRFLQNYEGNHEQSSAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
KMENERLKKENQELQNKTEQLEAEVQKLEKDQKTIQEDYETLVKIMNRARKLVLFEEDEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
ASPSFKMDRNGNLEKLAE
CCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
TKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHQ
CCCCHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YEKALQLAKKQRKQRMRALGNGQPAKKRLLYQPPAVDPEIIQETAAEEPVKTETPSVENE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
QPLMSGEHMPFVDESFKEELASLSHLLSPQTPAAAPEMTMNDVIRFLQNYEGNHEQSSAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
KMENERLKKENQELQNKTEQLEAEVQKLEKDQKTIQEDYETLVKIMNRARKLVLFEEDEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
ASPSFKMDRNGNLEKLAE
CCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 10629188