Click here to switch to the map view.

The map label for this gene is albD

Identifier: 16080792

GI number: 16080792

Start: 3838552

End: 3839862

Strand: Direct

Name: albD

Synonym: BSU37400

Alternate gene names: 16080792

Gene position: 3838552-3839862 (Clockwise)

Preceding gene: 16080791

Following gene: 16080793

Centisome position: 91.06

GC content: 46.68

Gene sequence:

>1311_bases
ATGAATAACATAATCCCTATCATGTCTTTGCTGTTCAAACAGCTTTACAGCCGGCAAGGGAAAAAGGACGCCATCCGCAT
TGCCGCAGGCCTTGTCATTCTGGCCGTGTTTGAAATCGGGCTGATCCGCCAGGCCGGCATTGATGAATCGGTGTTGCGCA
AAACGTATATCATACTCGCGCTTCTTTTGATGAACACATATATGGTGTTTCTTTCCGTGACATCACAATGGAAGGAATCT
TATATGAAGCTGAGCTGCCTGCTGCCGATTTCTTCACGGAGCTTTTGGCTCGCCCAGAGTGTCGTTTTGTTTGTCGATAC
CTGTTTGAGAAGAACTTTATTCTTTTTTATTTTACCGCTGTTCTTATTTGGAAACGGAACGCTGTCAGGGGCGCAAACAT
TGTTTTGGCTCGGCAGGTTTTCGTTTTTTACCGTTTACTCCATTATTTTCGGAGTTGTGCTAAGCAACCACTTCGTCAAA
AAGAAGAACTTGATGTTTCTGCTGCATGCGGCGATATTCGCCTGTGTATGTATCAGCGCCGCTTTGATGCCGGCCGCCAC
GATTCCGCTTTGCGCGGTTCATATCCTGTGGGCGGTGGTCATTGACTTTCCTGTCTTTCTGCAGGCGCCTCCGCAGCAGG
GCAAGATGCATTCATTTATGCGGCGATCTGAATTTTCGTTTTACAAAAGAGAATGGAACCGATTTATCTCTTCTAAAGCG
ATGCTGTTAAATTACGCGGTAATGGCGGTATTCAGCGGCTTCTTTTCGTTCCAGATGATGAACACCGGCATCTTCAATCA
GCAAGTGATTTATATCGTGATTTCCGCGCTTTTGCTCATCTGCTCGCCGATCGCCCTTTTGTATTCGATTGAAAAAAATG
ACCGGATGCTGCTCATCACGCTTCCGATCAAGCGAAAAACGATGTTTTGGGCGAAATATCGCTTTTATTCAGGCCTATTG
GCAGGCGGATTTCTCCTTGTCGTGATGATTGTGGGTTTCATCAGCGGCCGTTCGATTTCAGTTCTCACTTTTTTGCAGTG
CATTGAGTTGCTGCTGGCGGGAGCGTATATCAGGTTAACTGCGGATGAAAAAAGGCCCTCCTTCAGCTGGCAGACGGAGC
AGCAGCTATGGAGCGGTTTCTCAAAATATCGGTCTTATCTGTTTTGTCTTCCCCTATTCTTAGCCATATTAGCCGGCACC
GCTGTATCCTTGGCGGTCATTCCGATAGCCGGTCTGGTCATAGTCTATTACCTGCAAAAACAGGATGGTGGTTTCTTTGA
TACAAGCAAAAGAGAACGGCTTGGAAGTTAA

Upstream 100 bases:

>100_bases
TGTGATTATGCGGCTATTCTTCACAACAAACAGATCCAAAAGGTCATTCCGATTGGAGAGGAGACCGATCTGCGGCGGGA
ATTTTTCGAGGTGATCGGCC

Downstream 100 bases:

>100_bases
CCTGCTGAAGACTCATCAATTTTCAACTATTTCAATCGCCGCGAGCTTTCTGAAACCGATCGAAAGCGCGGCGGAACCTG
AGGAAGAAACGATTTATTTT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNNIIPIMSLLFKQLYSRQGKKDAIRIAAGLVILAVFEIGLIRQAGIDESVLRKTYIILALLLMNTYMVFLSVTSQWKES
YMKLSCLLPISSRSFWLAQSVVLFVDTCLRRTLFFFILPLFLFGNGTLSGAQTLFWLGRFSFFTVYSIIFGVVLSNHFVK
KKNLMFLLHAAIFACVCISAALMPAATIPLCAVHILWAVVIDFPVFLQAPPQQGKMHSFMRRSEFSFYKREWNRFISSKA
MLLNYAVMAVFSGFFSFQMMNTGIFNQQVIYIVISALLLICSPIALLYSIEKNDRMLLITLPIKRKTMFWAKYRFYSGLL
AGGFLLVVMIVGFISGRSISVLTFLQCIELLLAGAYIRLTADEKRPSFSWQTEQQLWSGFSKYRSYLFCLPLFLAILAGT
AVSLAVIPIAGLVIVYYLQKQDGGFFDTSKRERLGS

Sequences:

>Translated_436_residues
MNNIIPIMSLLFKQLYSRQGKKDAIRIAAGLVILAVFEIGLIRQAGIDESVLRKTYIILALLLMNTYMVFLSVTSQWKES
YMKLSCLLPISSRSFWLAQSVVLFVDTCLRRTLFFFILPLFLFGNGTLSGAQTLFWLGRFSFFTVYSIIFGVVLSNHFVK
KKNLMFLLHAAIFACVCISAALMPAATIPLCAVHILWAVVIDFPVFLQAPPQQGKMHSFMRRSEFSFYKREWNRFISSKA
MLLNYAVMAVFSGFFSFQMMNTGIFNQQVIYIVISALLLICSPIALLYSIEKNDRMLLITLPIKRKTMFWAKYRFYSGLL
AGGFLLVVMIVGFISGRSISVLTFLQCIELLLAGAYIRLTADEKRPSFSWQTEQQLWSGFSKYRSYLFCLPLFLAILAGT
AVSLAVIPIAGLVIVYYLQKQDGGFFDTSKRERLGS
>Mature_436_residues
MNNIIPIMSLLFKQLYSRQGKKDAIRIAAGLVILAVFEIGLIRQAGIDESVLRKTYIILALLLMNTYMVFLSVTSQWKES
YMKLSCLLPISSRSFWLAQSVVLFVDTCLRRTLFFFILPLFLFGNGTLSGAQTLFWLGRFSFFTVYSIIFGVVLSNHFVK
KKNLMFLLHAAIFACVCISAALMPAATIPLCAVHILWAVVIDFPVFLQAPPQQGKMHSFMRRSEFSFYKREWNRFISSKA
MLLNYAVMAVFSGFFSFQMMNTGIFNQQVIYIVISALLLICSPIALLYSIEKNDRMLLITLPIKRKTMFWAKYRFYSGLL
AGGFLLVVMIVGFISGRSISVLTFLQCIELLLAGAYIRLTADEKRPSFSWQTEQQLWSGFSKYRSYLFCLPLFLAILAGT
AVSLAVIPIAGLVIVYYLQKQDGGFFDTSKRERLGS

Specific function: Involved in the production of the bacteriocin subtilosin. Required for immunity to subtilosin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ALBD1_BACSU (P71008)

Other databases:

- EMBL:   Z80360
- EMBL:   AL009126
- PIR:   G70058
- RefSeq:   NP_391620.1
- ProteinModelPortal:   P71008
- EnsemblBacteria:   EBBACT00000001477
- GeneID:   937053
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37400
- NMPDR:   fig|224308.1.peg.3746
- GenoList:   BSU37400
- ProtClustDB:   CLSK2752548
- BioCyc:   BSUB:BSU37400-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49518; Mature: 49518

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x134130ac)-; HASH(0x1256fc0c)-; HASH(0x129b506c)-; HASH(0x12db8b18)-; HASH(0x1341eb78)-; HASH(0x1286d3ec)-; HASH(0x12987bfc)-; HASH(0x12980970)-; HASH(0xcbafa18)-; HASH(0x131a5e9c)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCHHHHCCH
>Mature Secondary Structure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CCCCCCCCCHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 10572140; 10809709; 10809710