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The map label for this gene is flhO

Identifier: 16080693

GI number: 16080693

Start: 3746279

End: 3747091

Strand: Reverse

Name: flhO

Synonym: BSU36400

Alternate gene names: 16080693

Gene position: 3747091-3746279 (Counterclockwise)

Preceding gene: 50812298

Following gene: 255767784

Centisome position: 88.89

GC content: 44.53

Gene sequence:

>813_bases
TTGTTAAAAGGATTATATACAGCAACATCCGCAATGATTGCCCAGCAGCGAAGAACGGAAATGCTTTCAAATAATATTGC
TAACGCAAATACATCAGGATATAAAGCTGATCAAGGCTCTATGCGCGCGTTCCCTGAGATGCTGCTCAGCAGAATAGAAT
CAAAATCTCCGGCCGGGACATCAAGGACGGAAATCGGTTCCGTGAATACCGGAGTATATATGCAGGAGCTCAAGCCTCTC
TTTACACAGGGAAGCCTGAAGTCCACAGACCAGCCTACAGACATTGCATTGATCGAAAATCAAGTTCCGATGAGTGCGGA
AACCAATGAAAAAGCTGCTCTTTTTTATCCGGTTCAAACAGCGGATGGAATCCGTTATTCAAAAAGCAGCACATTTTCAC
TAAATGAGAACAATCAGCTGACGATCAACGGACGCCCTATTTTATCGACGGATCGCCAGCCAATCACTGTTGATAATGAG
AATTTCACTGTGTCTGAAAACGGTACTGTGACAACGAACGGACGCACAGCCGGCCAGATTGATGTCAGAATGGCGGAAGA
TGTCCGCAATCTCAAACGGGACGGAAATGATTTGTACAGCACGGCGGACGGTAATGATCTGCCAAGCGCAGCCGGAAATA
ATCAGGTAGCCTATTCATTAAAACAAGGCGTCTCAGAGCTTTCAAACGTGGATGTGACAAGCGCCTATACAGAAATGACT
GAAGCGTACAGATCGTTTGAGGCGAATCAGAAGGTTATTCAGGCTTACGATAAAAGTATGGATAAAGCAGCAAATGAAAT
TGGAAAAATTTAA

Upstream 100 bases:

>100_bases
TGTTAAATGACGATAATAGGATAAAATACTGAGTTTTTATTATAGAACGAACGTTCCTATATGACAACTGGAAAAAATGC
CATTTTTAGAGGTGGGAAAT

Downstream 100 bases:

>100_bases
GAAAACGGAAGAAAAAAACGGGGGACATCAACTATGCTCAGGTCAATGCTAACGGCATCAACAACCTTAAACCAGCTGCA
GCAGCAGATTGACACAATCA

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGTSRTEIGSVNTGVYMQELKPL
FTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQTADGIRYSKSSTFSLNENNQLTINGRPILSTDRQPITVDNE
NFTVSENGTVTTNGRTAGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVAYSLKQGVSELSNVDVTSAYTEMT
EAYRSFEANQKVIQAYDKSMDKAANEIGKI

Sequences:

>Translated_270_residues
MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGTSRTEIGSVNTGVYMQELKPL
FTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQTADGIRYSKSSTFSLNENNQLTINGRPILSTDRQPITVDNE
NFTVSENGTVTTNGRTAGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVAYSLKQGVSELSNVDVTSAYTEMT
EAYRSFEANQKVIQAYDKSMDKAANEIGKI
>Mature_270_residues
MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGTSRTEIGSVNTGVYMQELKPL
FTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQTADGIRYSKSSTFSLNENNQLTINGRPILSTDRQPITVDNE
NFTVSENGTVTTNGRTAGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVAYSLKQGVSELSNVDVTSAYTEMT
EAYRSFEANQKVIQAYDKSMDKAANEIGKI

Specific function: Not required for motility

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family

Homologues:

Organism=Escherichia coli, GI1787318, Length=278, Percent_Identity=25.5395683453237, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1787317, Length=273, Percent_Identity=26.3736263736264, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLHO_BACSU (P39752)

Other databases:

- EMBL:   U12962
- EMBL:   Z83337
- EMBL:   AL009126
- PIR:   F69623
- RefSeq:   NP_391521.1
- ProteinModelPortal:   P39752
- EnsemblBacteria:   EBBACT00000003470
- GeneID:   936927
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36400
- NMPDR:   fig|224308.1.peg.3647
- GenoList:   BSU36400
- GeneTree:   EBGT00050000001027
- HOGENOM:   HBG579156
- OMA:   RAFEANQ
- ProtClustDB:   CLSK873685
- BioCyc:   BSUB:BSU36400-MONOMER
- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- TIGRFAMs:   TIGR03506

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod

EC number: NA

Molecular weight: Translated: 29431; Mature: 29431

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQT
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECC
ADGIRYSKSSTFSLNENNQLTINGRPILSTDRQPITVDNENFTVSENGTVTTNGRTAGQI
CCCCEECCCCEEEECCCCEEEECCCEEECCCCCCEEECCCCEEECCCCEEEECCCCCCEE
DVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVAYSLKQGVSELSNVDVTSAYTEMT
EEHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
EAYRSFEANQKVIQAYDKSMDKAANEIGKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQT
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECC
ADGIRYSKSSTFSLNENNQLTINGRPILSTDRQPITVDNENFTVSENGTVTTNGRTAGQI
CCCCEECCCCEEEECCCCEEEECCCEEECCCCCCEEECCCCEEECCCCEEEECCCCCCEE
DVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVAYSLKQGVSELSNVDVTSAYTEMT
EEHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
EAYRSFEANQKVIQAYDKSMDKAANEIGKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377