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The map label for this gene is ywpE

Identifier: 16080687

GI number: 16080687

Start: 3741732

End: 3742040

Strand: Reverse

Name: ywpE

Synonym: BSU36340

Alternate gene names: 16080687

Gene position: 3742040-3741732 (Counterclockwise)

Preceding gene: 16080689

Following gene: 16080685

Centisome position: 88.77

GC content: 41.1

Gene sequence:

>309_bases
ATGCGCCGGGATCAAAAAATGGGTGAGGGAAATTATCCGTTGGCGGGCCATCATTTGAAGCAAAAGAATCTTCTGTTCGG
ACCTCTGGAAAACATAAAAACAGGTGCCCAAATTGTCATCACGGATTTTAAAAAGGATTATATCTATTCTGTAACATCGA
AAGACATCATATCGGAAATGGATGCAGATGTAGTTGAGGAGACAAACAAAAAGGAGATTACGTTAATCACATGTGACAAG
GCGGTCAAAACCGAAGGGCGCCTCGTTGTGAAAGGGGAATTGGTTGATTCTTTTGGCCATACAAATTAA

Upstream 100 bases:

>100_bases
TTCACAATCAAGGCGGCGGATAACAATTAAAAGTGTCGATCTGGAGCTTCCGATCGTAAAAGGCACAACCAATGAAAATC
TTTTGATAGGGGCGGCAACA

Downstream 100 bases:

>100_bases
ATATGCAAGAGTGAAAGCACGAAGAGAAAAGCTGCCGTTCAAAACGGCAGCTTTTTTCATGCAGAACATATCTATTCTAA
ATGTCTATTGTGATGCTCTT

Product: sortase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MRRDQKMGEGNYPLAGHHLKQKNLLFGPLENIKTGAQIVITDFKKDYIYSVTSKDIISEMDADVVEETNKKEITLITCDK
AVKTEGRLVVKGELVDSFGHTN

Sequences:

>Translated_102_residues
MRRDQKMGEGNYPLAGHHLKQKNLLFGPLENIKTGAQIVITDFKKDYIYSVTSKDIISEMDADVVEETNKKEITLITCDK
AVKTEGRLVVKGELVDSFGHTN
>Mature_102_residues
MRRDQKMGEGNYPLAGHHLKQKNLLFGPLENIKTGAQIVITDFKKDYIYSVTSKDIISEMDADVVEETNKKEITLITCDK
AVKTEGRLVVKGELVDSFGHTN

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C60 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWPE_BACSU (P94587)

Other databases:

- EMBL:   Z83337
- EMBL:   AL009126
- PIR:   G70065
- RefSeq:   NP_391515.1
- ProteinModelPortal:   P94587
- SMR:   P94587
- EnsemblBacteria:   EBBACT00000000283
- GeneID:   936904
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36340
- NMPDR:   fig|224308.1.peg.3641
- GenoList:   BSU36340
- GeneTree:   EBGT00070000031805
- HOGENOM:   HBG219237
- OMA:   PIDRAKN
- BioCyc:   BSUB:BSU36340-MONOMER
- InterPro:   IPR005754

Pfam domain/function: PF04203 Sortase

EC number: NA

Molecular weight: Translated: 11468; Mature: 11468

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: ACT_SITE 78-78

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDQKMGEGNYPLAGHHLKQKNLLFGPLENIKTGAQIVITDFKKDYIYSVTSKDIISEM
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHC
DADVVEETNKKEITLITCDKAVKTEGRLVVKGELVDSFGHTN
CHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECEECCCCCCC
>Mature Secondary Structure
MRRDQKMGEGNYPLAGHHLKQKNLLFGPLENIKTGAQIVITDFKKDYIYSVTSKDIISEM
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHC
DADVVEETNKKEITLITCDKAVKTEGRLVVKGELVDSFGHTN
CHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377