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The map label for this gene is ywrF

Identifier: 16080661

GI number: 16080661

Start: 3717999

End: 3718616

Strand: Direct

Name: ywrF

Synonym: BSU36080

Alternate gene names: 16080661

Gene position: 3717999-3718616 (Clockwise)

Preceding gene: 16080660

Following gene: 16080662

Centisome position: 88.2

GC content: 45.95

Gene sequence:

>618_bases
ATGTACATATTTCAAGCTGATCAGCTTAGTGCCAAAGACACATACAAGCTATTGTCAGGTACCGTTATTCCCCGCCCCAT
TGCATTTGTGACAACACTTTCTTCAGGAGGAGCGGTAAATGCCGCGCCTTTCAGTTTTTATAACGTCGTCAGCTCAGATC
CTCCGCTTCTCAGTATTTCTGTTAACAGGACGGAAGGACGCCAAAAAGATACAGCACGAAACGCAGTGGAGAACGGAGAA
TTTGTCGTTCATGTCAGTGATGAAGCCATCATTGAAGATATCAATGAAACAGCTGCAAGCTTAAGGCCGGATGAAAGCGA
GCTTACACGCACCTCGCTTCATCCTGTTGAAAGCAAAGCTGTTTCAGTTCCCGGCATTAAGGAAGCCCGCGTTCGCTTTG
AGTGCAAATTAGAGCGGCATATTACCTTTGACAATGATCAAGGCATCACTACAGCAGATCTGCTCATCGGAAGAGTTGTC
TGCTTCCACCTAGATGAAAAGGTGTATGATGCAGAAAAGGGATATATTTTAACGGATGAATTAAAGCCTGCCTCACGATT
GGCGGGAAATCACTATGCCAAGCTGGGGGAAGAATTCACACTGATTCGTCCCAGCTGA

Upstream 100 bases:

>100_bases
ATATATGTCATGACATAACATATGCAACCCGCATCATTTGGTTTCCTTTAAACCATTTCGTTATAATCAAGGTATCCTAA
CGATAAAGGCGGTTGTTGCT

Downstream 100 bases:

>100_bases
AGAGAAGGACTATTTAAATAGAAGAAACTAGTCAAAAAGACCTTATGATTACAAAATATCGCCTGTAAATAACTGAAAAA
ATATCAAAAAAAAGAACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MYIFQADQLSAKDTYKLLSGTVIPRPIAFVTTLSSGGAVNAAPFSFYNVVSSDPPLLSISVNRTEGRQKDTARNAVENGE
FVVHVSDEAIIEDINETAASLRPDESELTRTSLHPVESKAVSVPGIKEARVRFECKLERHITFDNDQGITTADLLIGRVV
CFHLDEKVYDAEKGYILTDELKPASRLAGNHYAKLGEEFTLIRPS

Sequences:

>Translated_205_residues
MYIFQADQLSAKDTYKLLSGTVIPRPIAFVTTLSSGGAVNAAPFSFYNVVSSDPPLLSISVNRTEGRQKDTARNAVENGE
FVVHVSDEAIIEDINETAASLRPDESELTRTSLHPVESKAVSVPGIKEARVRFECKLERHITFDNDQGITTADLLIGRVV
CFHLDEKVYDAEKGYILTDELKPASRLAGNHYAKLGEEFTLIRPS
>Mature_205_residues
MYIFQADQLSAKDTYKLLSGTVIPRPIAFVTTLSSGGAVNAAPFSFYNVVSSDPPLLSISVNRTEGRQKDTARNAVENGE
FVVHVSDEAIIEDINETAASLRPDESELTRTSLHPVESKAVSVPGIKEARVRFECKLERHITFDNDQGITTADLLIGRVV
CFHLDEKVYDAEKGYILTDELKPASRLAGNHYAKLGEEFTLIRPS

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWRF_BACSU (O05220)

Other databases:

- EMBL:   Z93767
- EMBL:   AL009126
- PIR:   H70068
- RefSeq:   NP_391489.1
- ProteinModelPortal:   O05220
- SMR:   O05220
- EnsemblBacteria:   EBBACT00000001041
- GeneID:   936871
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36080
- NMPDR:   fig|224308.1.peg.3615
- GenoList:   BSU36080
- GeneTree:   EBGT00050000002636
- HOGENOM:   HBG644901
- OMA:   FRIERPN
- ProtClustDB:   CLSK888002
- BioCyc:   BSUB:BSU36080-MONOMER
- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002
- Gene3D:   G3DSA:2.30.110.10
- SMART:   SM00903

Pfam domain/function: PF01613 Flavin_Reduct; SSF50475 FMN_binding

EC number: NA

Molecular weight: Translated: 22585; Mature: 22585

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIFQADQLSAKDTYKLLSGTVIPRPIAFVTTLSSGGAVNAAPFSFYNVVSSDPPLLSIS
CEEEECCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHHCCCCCEEEEE
VNRTEGRQKDTARNAVENGEFVVHVSDEAIIEDINETAASLRPDESELTRTSLHPVESKA
ECCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCE
VSVPGIKEARVRFECKLERHITFDNDQGITTADLLIGRVVCFHLDEKVYDAEKGYILTDE
ECCCCCHHCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCEEEECC
LKPASRLAGNHYAKLGEEFTLIRPS
CCHHHHHCCCHHHHCCCEEEEEECC
>Mature Secondary Structure
MYIFQADQLSAKDTYKLLSGTVIPRPIAFVTTLSSGGAVNAAPFSFYNVVSSDPPLLSIS
CEEEECCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHHCCCCCEEEEE
VNRTEGRQKDTARNAVENGEFVVHVSDEAIIEDINETAASLRPDESELTRTSLHPVESKA
ECCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCE
VSVPGIKEARVRFECKLERHITFDNDQGITTADLLIGRVVCFHLDEKVYDAEKGYILTDE
ECCCCCHHCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCEEEECC
LKPASRLAGNHYAKLGEEFTLIRPS
CCHHHHHCCCHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377