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The map label for this gene is lytD

Identifier: 16080631

GI number: 16080631

Start: 3684826

End: 3687468

Strand: Reverse

Name: lytD

Synonym: BSU35780

Alternate gene names: 16080631

Gene position: 3687468-3684826 (Counterclockwise)

Preceding gene: 16080632

Following gene: 16080627

Centisome position: 87.47

GC content: 44.34

Gene sequence:

>2643_bases
ATGAAAAAGAGACTAATCGCACCTATGCTTCTATCCGCCGCGTCCCTTGCCTTTTTTGCCATGTCTGGTTCTGCCCAGGC
AGCCGCGTATACCGACTACTCACTATATAAAGTAGAGCCGTCGAATACGTTCAGTACAGAAAGCCAAGCCTCACAAGCTG
TCGCCAAACTGGAAAAAGATACTGGCTGGGATGCATCCTATCAGGCTTCAGGCACAACAACGACCTACCAAATTTCCGCC
TCAGGCATTCATAGCGAATCAGAAGCGAAAGCAATACTGAGCGGACTCGCCAAACAGACATCAATTACAGGAACGTCAAG
TCCTGTTGGAAGCAAACAGCCATATGTCACCATCTCGTCAGGTGCCATCTCCGGAGAAAAACAGGCCAACACTATCCTAG
CAAAGCTGAAACAGGAGACGGGAGTGGCTGGCGCTGTAAAAGCTTACGGAGCAGCTCAGCCCTATATGAACGTCATGACA
TCAGACATTGCTGATGAGACAAAAGTCAAGGCGCTTATCCAGAGCCTGGCCAAGCAAACGGGGATTAAAAGCTCGTATCA
GCCCATCACACACACGGTGTCTGTCACAACCATTCAGTCTGGCACAATCGTGGGAGACAGCAGAGCAGCGCAGATCAAAA
ACGCCTTCCAAAAGGAATCTGGGCTGCAGGCATCATTAAAGGAAACAGTGAAAGGGCAAGCCTATTATACGTTCACAACT
GCCGCCATTTCAGGTGAAGCCAATGCCAAAACTCTATTGCAGCAGCTGAAACAGAGCACTGGCATCACAGGCAGCTACAA
GTCCATCAATCAAAAAACAACCGTTGAGTCATACAATGTCCAATCAGCTTATTTCAAAGGGCTGAGTACAGTAAAGGACG
CCATCAGCCAAATCAAGAAAAACACTGGCGTATCCGGCAGTTATCAACAGGTTGGAAAAAGCACATCATATACCGTGAAT
ATGAAGGGTATAACAAAACAGCAGCTCCAAAAAATAGACACTTTCTTTAAAAAGAAAAAATGGCATTACACGTCATCCAG
CGTCAAAAAAACGACAACGTCTGCAGCTTATCAAATCACGACGGCAAAGATTTTAGGCGAGCAGCAAGCAAACAAAGCAG
CAGCCTTCTTTGCTCAGAAAAAAGTAAAAGCTGCAAAAACAGCAGCTGGATCAACAGCAGAAAATCAATATCAGCTCATC
TCAGAAGAAACATCAGATCAAGCAAAAGTCACAAAGGGTTTGAACATATTAAAGAAAAATCAGCTAAGTGCTTCTGCGAA
ATCCGTCAAAAAACAAATAGCTGACACGTTTAAAATCACAACCGAATCTCTGCTTGATCAAACGAAAGTCAATCAGGCAC
TCACGTTTTTCAAATCGAATCATATATCAGTAGCAAGCCAGAAAACCGGTCAGACAGCTGCGAGCAGCTATCAAATCACA
ACTGAAGCTATCATCAGCCAAGAAGAGATTGACCGCGTTTTAACATTTTTCAAACAAAATCATATCGCAGTCACAACATC
AAAAACAGGCCAGACTGCATATACACAATACAAAATCGTGACAACACAGCTTAGCAGCAAAACCGCATTGAACAATGGGT
TAACCTATCTTAAATCGAAAAGTGTAACCCCGAGCTATACAACGAAAAGCAATACGCTTTATAAAATCAGCGTAAATGAG
CAGTTCACAGGCAATGATACAGCTGCTGCGGCATCAACGAAGCTAAAACAATTATACGGATGGACATCATCTATCGTGAA
GATCAAAAACGGCCCGCAAATCATGAAAACAAACTACAATCTCTCGCTTCGTGATATGGTCCAAAAACAAATGACAGTAA
GTCCGCAAACAGACGGAGCGGCTTACGTATCGCTCACGTACATTAATACAGCAACATCAACTGTTACGGCTGATGTACTA
AATATCCGGTCAACGCCGGAAGTCAGCCCGACAAACGTGATCGGCCAGTTTAAAAAAGGCGATAAAGTGAAAGTCATCGG
ACAGATAAACGGCTGGGCTAAGATCAATTTGGGCTGGCGAAACGCAAGCAGTGATGAAGTAGTTCAATACGTGGATCCGA
ATAACTTTTCCAGAGACAGCAAATACTACTTCCAATTTCTCAAGCTGTCACAGACAGCGGGTCTCAGCGTTACTGAGGTA
AATCAGAAAGTGCTTGCGGGTAAAGGCATCCTGACAGGGAGAGCAAAGGCATTTATCGATGCCGCCAATCAATATAGCAT
CAACGAACTGTATTTAATCTCACACGCTCTTCTGGAAACAGGAAACGGGACATCCGCTTTAGCCAATGGATTAACCTATA
ACGGAAAAACCGTATACAACATGTATGGAATTGGAGCATACGACAGCAATCCGAATTACTACGGAGCCAAATATGCGTAC
GAGCAGGGCTGGTTCACACCAGAAGCGGCCATTATCGGCGGAGCTAAATTCATAGGCTCATCGTATATCCACAACACAGC
TTACAATCAAGACACACTGTACAAAATGAGATGGTCAGCTACAGCGACACATCAATACGCAACAGACATCGGCTGGGCGT
ACAAACAAGTAAACCGCATGTACAGCCTGTATTCATTGCTGGACGGTTATACACTTTATTTTGATGTTCCGGAATATCGA
TAA

Upstream 100 bases:

>100_bases
TTTATTAGAAAATGGAAGTGATTCACCTATAAATGAAGCATGCGCGTGCCGATAAATAAACTAGTTTTATATACTCATAG
AATAAGAAAGAGGAGAAGGA

Downstream 100 bases:

>100_bases
AAAACTTAGAAAGTTGCAAATAGGCTGTAGCTATTAAATAGCTACAGCCTATTTGATTATCACACCTCAATCTTGTCCGC
AACAATCATAAAAATACTCA

Product: exported N-acetylglucosaminidase (major autolysin) (CWBP90)

Products: NA

Alternate protein names: Cell wall-associated polypeptide 90; CWBP90

Number of amino acids: Translated: 880; Mature: 880

Protein sequence:

>880_residues
MKKRLIAPMLLSAASLAFFAMSGSAQAAAYTDYSLYKVEPSNTFSTESQASQAVAKLEKDTGWDASYQASGTTTTYQISA
SGIHSESEAKAILSGLAKQTSITGTSSPVGSKQPYVTISSGAISGEKQANTILAKLKQETGVAGAVKAYGAAQPYMNVMT
SDIADETKVKALIQSLAKQTGIKSSYQPITHTVSVTTIQSGTIVGDSRAAQIKNAFQKESGLQASLKETVKGQAYYTFTT
AAISGEANAKTLLQQLKQSTGITGSYKSINQKTTVESYNVQSAYFKGLSTVKDAISQIKKNTGVSGSYQQVGKSTSYTVN
MKGITKQQLQKIDTFFKKKKWHYTSSSVKKTTTSAAYQITTAKILGEQQANKAAAFFAQKKVKAAKTAAGSTAENQYQLI
SEETSDQAKVTKGLNILKKNQLSASAKSVKKQIADTFKITTESLLDQTKVNQALTFFKSNHISVASQKTGQTAASSYQIT
TEAIISQEEIDRVLTFFKQNHIAVTTSKTGQTAYTQYKIVTTQLSSKTALNNGLTYLKSKSVTPSYTTKSNTLYKISVNE
QFTGNDTAAAASTKLKQLYGWTSSIVKIKNGPQIMKTNYNLSLRDMVQKQMTVSPQTDGAAYVSLTYINTATSTVTADVL
NIRSTPEVSPTNVIGQFKKGDKVKVIGQINGWAKINLGWRNASSDEVVQYVDPNNFSRDSKYYFQFLKLSQTAGLSVTEV
NQKVLAGKGILTGRAKAFIDAANQYSINELYLISHALLETGNGTSALANGLTYNGKTVYNMYGIGAYDSNPNYYGAKYAY
EQGWFTPEAAIIGGAKFIGSSYIHNTAYNQDTLYKMRWSATATHQYATDIGWAYKQVNRMYSLYSLLDGYTLYFDVPEYR

Sequences:

>Translated_880_residues
MKKRLIAPMLLSAASLAFFAMSGSAQAAAYTDYSLYKVEPSNTFSTESQASQAVAKLEKDTGWDASYQASGTTTTYQISA
SGIHSESEAKAILSGLAKQTSITGTSSPVGSKQPYVTISSGAISGEKQANTILAKLKQETGVAGAVKAYGAAQPYMNVMT
SDIADETKVKALIQSLAKQTGIKSSYQPITHTVSVTTIQSGTIVGDSRAAQIKNAFQKESGLQASLKETVKGQAYYTFTT
AAISGEANAKTLLQQLKQSTGITGSYKSINQKTTVESYNVQSAYFKGLSTVKDAISQIKKNTGVSGSYQQVGKSTSYTVN
MKGITKQQLQKIDTFFKKKKWHYTSSSVKKTTTSAAYQITTAKILGEQQANKAAAFFAQKKVKAAKTAAGSTAENQYQLI
SEETSDQAKVTKGLNILKKNQLSASAKSVKKQIADTFKITTESLLDQTKVNQALTFFKSNHISVASQKTGQTAASSYQIT
TEAIISQEEIDRVLTFFKQNHIAVTTSKTGQTAYTQYKIVTTQLSSKTALNNGLTYLKSKSVTPSYTTKSNTLYKISVNE
QFTGNDTAAAASTKLKQLYGWTSSIVKIKNGPQIMKTNYNLSLRDMVQKQMTVSPQTDGAAYVSLTYINTATSTVTADVL
NIRSTPEVSPTNVIGQFKKGDKVKVIGQINGWAKINLGWRNASSDEVVQYVDPNNFSRDSKYYFQFLKLSQTAGLSVTEV
NQKVLAGKGILTGRAKAFIDAANQYSINELYLISHALLETGNGTSALANGLTYNGKTVYNMYGIGAYDSNPNYYGAKYAY
EQGWFTPEAAIIGGAKFIGSSYIHNTAYNQDTLYKMRWSATATHQYATDIGWAYKQVNRMYSLYSLLDGYTLYFDVPEYR
>Mature_880_residues
MKKRLIAPMLLSAASLAFFAMSGSAQAAAYTDYSLYKVEPSNTFSTESQASQAVAKLEKDTGWDASYQASGTTTTYQISA
SGIHSESEAKAILSGLAKQTSITGTSSPVGSKQPYVTISSGAISGEKQANTILAKLKQETGVAGAVKAYGAAQPYMNVMT
SDIADETKVKALIQSLAKQTGIKSSYQPITHTVSVTTIQSGTIVGDSRAAQIKNAFQKESGLQASLKETVKGQAYYTFTT
AAISGEANAKTLLQQLKQSTGITGSYKSINQKTTVESYNVQSAYFKGLSTVKDAISQIKKNTGVSGSYQQVGKSTSYTVN
MKGITKQQLQKIDTFFKKKKWHYTSSSVKKTTTSAAYQITTAKILGEQQANKAAAFFAQKKVKAAKTAAGSTAENQYQLI
SEETSDQAKVTKGLNILKKNQLSASAKSVKKQIADTFKITTESLLDQTKVNQALTFFKSNHISVASQKTGQTAASSYQIT
TEAIISQEEIDRVLTFFKQNHIAVTTSKTGQTAYTQYKIVTTQLSSKTALNNGLTYLKSKSVTPSYTTKSNTLYKISVNE
QFTGNDTAAAASTKLKQLYGWTSSIVKIKNGPQIMKTNYNLSLRDMVQKQMTVSPQTDGAAYVSLTYINTATSTVTADVL
NIRSTPEVSPTNVIGQFKKGDKVKVIGQINGWAKINLGWRNASSDEVVQYVDPNNFSRDSKYYFQFLKLSQTAGLSVTEV
NQKVLAGKGILTGRAKAFIDAANQYSINELYLISHALLETGNGTSALANGLTYNGKTVYNMYGIGAYDSNPNYYGAKYAY
EQGWFTPEAAIIGGAKFIGSSYIHNTAYNQDTLYKMRWSATATHQYATDIGWAYKQVNRMYSLYSLLDGYTLYFDVPEYR

Specific function: Cell wall hydrolase not involved in cell autolysis, competence, sporulation or germination. It hydrolyzes the beta-1,4 glycan bond between the N-acetylglucosaminyl and the N- acetylmuramoyl residues in the glycan chain

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Secreted, cell wall

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 73 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LYTD_BACSU (P39848)

Other databases:

- EMBL:   U02562
- EMBL:   D45048
- EMBL:   AL009126
- PIR:   S60137
- RefSeq:   NP_391459.1
- ProteinModelPortal:   P39848
- EnsemblBacteria:   EBBACT00000003789
- GeneID:   936822
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35780
- NMPDR:   fig|224308.1.peg.3585
- GenoList:   BSU35780
- GeneTree:   EBGT00050000000163
- HOGENOM:   HBG338369
- OMA:   FQFLKLS
- ProtClustDB:   CLSK887978
- BioCyc:   BSUB:BSU35780-MONOMER
- BRENDA:   3.2.1.96
- InterPro:   IPR013338
- InterPro:   IPR002901
- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR007730
- SMART:   SM00047
- SMART:   SM00287

Pfam domain/function: PF01832 Glucosaminidase; PF08239 SH3_3; PF05036 SPOR

EC number: =3.2.1.96

Molecular weight: Translated: 95554; Mature: 95554

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRLIAPMLLSAASLAFFAMSGSAQAAAYTDYSLYKVEPSNTFSTESQASQAVAKLEKD
CCCCHHHHHHHHHHHHHHEEECCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHC
TGWDASYQASGTTTTYQISASGIHSESEAKAILSGLAKQTSITGTSSPVGSKQPYVTISS
CCCCCCEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
GAISGEKQANTILAKLKQETGVAGAVKAYGAAQPYMNVMTSDIADETKVKALIQSLAKQT
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIKSSYQPITHTVSVTTIQSGTIVGDSRAAQIKNAFQKESGLQASLKETVKGQAYYTFTT
CCCCCCCCCEEEEEEEEEECCEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEE
AAISGEANAKTLLQQLKQSTGITGSYKSINQKTTVESYNVQSAYFKGLSTVKDAISQIKK
EEECCCCHHHHHHHHHHHHCCCCCCHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
NTGVSGSYQQVGKSTSYTVNMKGITKQQLQKIDTFFKKKKWHYTSSSVKKTTTSAAYQIT
HCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEE
TAKILGEQQANKAAAFFAQKKVKAAKTAAGSTAENQYQLISEETSDQAKVTKGLNILKKN
HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
QLSASAKSVKKQIADTFKITTESLLDQTKVNQALTFFKSNHISVASQKTGQTAASSYQIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEH
TEAIISQEEIDRVLTFFKQNHIAVTTSKTGQTAYTQYKIVTTQLSSKTALNNGLTYLKSK
HHHHHCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEEEECCCHHHHHCCCCEEECC
SVTPSYTTKSNTLYKISVNEQFTGNDTAAAASTKLKQLYGWTSSIVKIKNGPQIMKTNYN
CCCCCCCCCCCEEEEEEECCEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCC
LSLRDMVQKQMTVSPQTDGAAYVSLTYINTATSTVTADVLNIRSTPEVSPTNVIGQFKKG
EEHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHCCCCC
DKVKVIGQINGWAKINLGWRNASSDEVVQYVDPNNFSRDSKYYFQFLKLSQTAGLSVTEV
CEEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHH
NQKVLAGKGILTGRAKAFIDAANQYSINELYLISHALLETGNGTSALANGLTYNGKTVYN
HHHHHHCCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCEECCEEEEE
MYGIGAYDSNPNYYGAKYAYEQGWFTPEAAIIGGAKFIGSSYIHNTAYNQDTLYKMRWSA
EEEEEEECCCCCCCCCEEEECCCCCCCCHHEECCHHHHCCHHHHCCCCCCCCEEEEEECC
TATHQYATDIGWAYKQVNRMYSLYSLLDGYTLYFDVPEYR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
>Mature Secondary Structure
MKKRLIAPMLLSAASLAFFAMSGSAQAAAYTDYSLYKVEPSNTFSTESQASQAVAKLEKD
CCCCHHHHHHHHHHHHHHEEECCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHC
TGWDASYQASGTTTTYQISASGIHSESEAKAILSGLAKQTSITGTSSPVGSKQPYVTISS
CCCCCCEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
GAISGEKQANTILAKLKQETGVAGAVKAYGAAQPYMNVMTSDIADETKVKALIQSLAKQT
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIKSSYQPITHTVSVTTIQSGTIVGDSRAAQIKNAFQKESGLQASLKETVKGQAYYTFTT
CCCCCCCCCEEEEEEEEEECCEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEE
AAISGEANAKTLLQQLKQSTGITGSYKSINQKTTVESYNVQSAYFKGLSTVKDAISQIKK
EEECCCCHHHHHHHHHHHHCCCCCCHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
NTGVSGSYQQVGKSTSYTVNMKGITKQQLQKIDTFFKKKKWHYTSSSVKKTTTSAAYQIT
HCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEE
TAKILGEQQANKAAAFFAQKKVKAAKTAAGSTAENQYQLISEETSDQAKVTKGLNILKKN
HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
QLSASAKSVKKQIADTFKITTESLLDQTKVNQALTFFKSNHISVASQKTGQTAASSYQIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEH
TEAIISQEEIDRVLTFFKQNHIAVTTSKTGQTAYTQYKIVTTQLSSKTALNNGLTYLKSK
HHHHHCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEEEECCCHHHHHCCCCEEECC
SVTPSYTTKSNTLYKISVNEQFTGNDTAAAASTKLKQLYGWTSSIVKIKNGPQIMKTNYN
CCCCCCCCCCCEEEEEEECCEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCC
LSLRDMVQKQMTVSPQTDGAAYVSLTYINTATSTVTADVLNIRSTPEVSPTNVIGQFKKG
EEHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHCCCCC
DKVKVIGQINGWAKINLGWRNASSDEVVQYVDPNNFSRDSKYYFQFLKLSQTAGLSVTEV
CEEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHH
NQKVLAGKGILTGRAKAFIDAANQYSINELYLISHALLETGNGTSALANGLTYNGKTVYN
HHHHHHCCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCEECCEEEEE
MYGIGAYDSNPNYYGAKYAYEQGWFTPEAAIIGGAKFIGSSYIHNTAYNQDTLYKMRWSA
EEEEEEECCCCCCCCCEEEECCCCCCCCHHEECCHHHHCCHHHHCCCCCCCCEEEEEECC
TATHQYATDIGWAYKQVNRMYSLYSLLDGYTLYFDVPEYR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934877; 7581999; 9384377