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The map label for this gene is yviF

Identifier: 16080591

GI number: 16080591

Start: 3636264

End: 3636695

Strand: Reverse

Name: yviF

Synonym: BSU35380

Alternate gene names: 16080591

Gene position: 3636695-3636264 (Counterclockwise)

Preceding gene: 16080592

Following gene: 16080590

Centisome position: 86.27

GC content: 38.19

Gene sequence:

>432_bases
ATGATCATTCATACGAAGTACCATGGCCAAATGAACATAAAAGAAGAACAAATCATTCTTTTTGAAAGCGGGATTCCAGG
CTTTTTAGAAGAAAAACAGTTCGTCATACTTCCGCTTTCAGAAGACTCTCCATTCGTGGCACTGCAGTCCGTCACTTCAG
AAAATCTTGCGTTTATCGTCGTAAGTCCGTTTATCTTTTTTAAGAATTATGAATTTGATCTTGATGAATCAACTGCTGAA
CTTTTGGATATCGATAATATTCAAGACGTAGAAGTCATGACAATATTGACTATGGCAGAGCCATTTGAAAAGTCTACTGC
GAATTTATTGGCTCCCATTATTGTGAATCGCAAGAACATGATGGCTAAGCAAGTCGTTTTACACGACTCCTCATATACGA
CAAAGCATCCGATTGGAGGAGAATCATGCTAG

Upstream 100 bases:

>100_bases
GAAATGTTAAGGTTGACATGCTTCAATACCCTGATTTAAATATAGATGTAGAATACCCGAAAGAATCACCCGAAAAGTAA
AAAGAAAAGGATCGTGAACA

Downstream 100 bases:

>100_bases
TTTTATCGCGGAAAATAAACGAAGCGATTCAAATAGGTGCTGATATTGAAGTAAAAGTGATTGCGGTTGAAGGGGATCAA
GTGAAGCTTGGAATTGACGC

Product: flagellar assembly protein FliW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIIHTKYHGQMNIKEEQIILFESGIPGFLEEKQFVILPLSEDSPFVALQSVTSENLAFIVVSPFIFFKNYEFDLDESTAE
LLDIDNIQDVEVMTILTMAEPFEKSTANLLAPIIVNRKNMMAKQVVLHDSSYTTKHPIGGESC

Sequences:

>Translated_143_residues
MIIHTKYHGQMNIKEEQIILFESGIPGFLEEKQFVILPLSEDSPFVALQSVTSENLAFIVVSPFIFFKNYEFDLDESTAE
LLDIDNIQDVEVMTILTMAEPFEKSTANLLAPIIVNRKNMMAKQVVLHDSSYTTKHPIGGESC
>Mature_143_residues
MIIHTKYHGQMNIKEEQIILFESGIPGFLEEKQFVILPLSEDSPFVALQSVTSENLAFIVVSPFIFFKNYEFDLDESTAE
LLDIDNIQDVEVMTILTMAEPFEKSTANLLAPIIVNRKNMMAKQVVLHDSSYTTKHPIGGESC

Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum

COG id: COG1699

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliW family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLIW_BACSU (P96503)

Other databases:

- EMBL:   U56901
- EMBL:   AL009126
- PIR:   C70042
- RefSeq:   NP_391418.1
- HSSP:   Q9K6V7
- ProteinModelPortal:   P96503
- SMR:   P96503
- EnsemblBacteria:   EBBACT00000002209
- GeneID:   936732
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35380
- NMPDR:   fig|224308.1.peg.3544
- GenoList:   BSU35380
- GeneTree:   EBGT00050000002685
- HOGENOM:   HBG498829
- OMA:   ISRNESH
- ProtClustDB:   PRK13285
- BioCyc:   BSUB:BSU35380-MONOMER
- GO:   GO:0005737
- GO:   GO:0019861
- HAMAP:   MF_01185
- InterPro:   IPR003775

Pfam domain/function: PF02623 FliW

EC number: NA

Molecular weight: Translated: 16170; Mature: 16170

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIHTKYHGQMNIKEEQIILFESGIPGFLEEKQFVILPLSEDSPFVALQSVTSENLAFIV
CEEEEEECCEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEE
VSPFIFFKNYEFDLDESTAELLDIDNIQDVEVMTILTMAEPFEKSTANLLAPIIVNRKNM
EEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHEEECCCHH
MAKQVVLHDSSYTTKHPIGGESC
HEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIIHTKYHGQMNIKEEQIILFESGIPGFLEEKQFVILPLSEDSPFVALQSVTSENLAFIV
CEEEEEECCEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEE
VSPFIFFKNYEFDLDESTAELLDIDNIQDVEVMTILTMAEPFEKSTANLLAPIIVNRKNM
EEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHEEECCCHH
MAKQVVLHDSSYTTKHPIGGESC
HEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377