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The map label for this gene is yvjA

Identifier: 16080581

GI number: 16080581

Start: 3626128

End: 3626973

Strand: Reverse

Name: yvjA

Synonym: BSU35280

Alternate gene names: 16080581

Gene position: 3626973-3626128 (Counterclockwise)

Preceding gene: 16080583

Following gene: 16080580

Centisome position: 86.04

GC content: 45.39

Gene sequence:

>846_bases
ATGGACGTACGGAATAAAACATTGTGGATTTTGCGGGATTATGTATACATATTGATAGGAGCAGCGATTACGGCCGTGTC
CTTTAATGTATTTTTGCTTCCGAATAAGATTGCCGCCGGCGGGGTCAGCGGGATCAGTACGATTTTACAATCATATGGTT
TTGAAGCAGCGTATGTACAGTGGATTATTAATATCCCTTTATTTATTGCTGGCGTCATTTTGCTCGGCGGGAAATTTGGA
CTAAAGACGCTTGCAGGTTCTGTGTTTTTGCCGCTAGTAGTGTTTCTGACAAGGGATATTCAGCCCGCCACTCATCATGA
ACTCCTGGCGGCGATTTTTGGCGGTGTCGGGATAGGTATCGGAATTGGTATTGTGTACTTAGGGAAAGGTTCGACGGGAG
GTACAGCCTTGGCTGCACAGATCATTCATAAGTACTCCGGTCTGTCATTGGGGAAGTGTCTCGCCATCATTGACGGAATG
ATCGTTGTTACGGCTATGATTGTATTTAATATTGAGCAAGGCTTATATGCCATGCTTGGCGTCTATGTGTCCAGCAAAAC
CATTGATGTTGTGCAAGTCGGCTTTAATCGTTCAAAAATGGCGCTCATCATTACAAAGCAGGAGCAGGCTGTCAAGGAGG
CTGTCTTACAGAAGATTGACAGAGGCGTGACAAAAATTTCTGCAGTCGGCGGATATACTGACGATGACCGTCCGATTTTA
ATGTGCGTGGTTGGGCAAACTGAATTCACCAAATTGAAACAAATCGTCAAACAGATTGATGAGTCAGCTTTTGTAATTGT
AGCAGACGCGAGCGAGGTGCTGGGCGAGGGTTTCAAACGCGCTTAA

Upstream 100 bases:

>100_bases
TGCTTTAGCATATTACCACTGTATTTGGGTGTTATTTACATCTAATCAGGGAAGGATTAAAATGCTATCGGAGAGCATTG
GAAGAAACGGAGGATATATG

Downstream 100 bases:

>100_bases
ACGAGGTTATAATATGGAAGAGATCGTAAAGGAGTTGTGCTTCTCAACATGAAATCAAAGTTATCGATACTAATGATTGG
ATTTGCGCTTTCTGTTCTGT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDVRNKTLWILRDYVYILIGAAITAVSFNVFLLPNKIAAGGVSGISTILQSYGFEAAYVQWIINIPLFIAGVILLGGKFG
LKTLAGSVFLPLVVFLTRDIQPATHHELLAAIFGGVGIGIGIGIVYLGKGSTGGTALAAQIIHKYSGLSLGKCLAIIDGM
IVVTAMIVFNIEQGLYAMLGVYVSSKTIDVVQVGFNRSKMALIITKQEQAVKEAVLQKIDRGVTKISAVGGYTDDDRPIL
MCVVGQTEFTKLKQIVKQIDESAFVIVADASEVLGEGFKRA

Sequences:

>Translated_281_residues
MDVRNKTLWILRDYVYILIGAAITAVSFNVFLLPNKIAAGGVSGISTILQSYGFEAAYVQWIINIPLFIAGVILLGGKFG
LKTLAGSVFLPLVVFLTRDIQPATHHELLAAIFGGVGIGIGIGIVYLGKGSTGGTALAAQIIHKYSGLSLGKCLAIIDGM
IVVTAMIVFNIEQGLYAMLGVYVSSKTIDVVQVGFNRSKMALIITKQEQAVKEAVLQKIDRGVTKISAVGGYTDDDRPIL
MCVVGQTEFTKLKQIVKQIDESAFVIVADASEVLGEGFKRA
>Mature_281_residues
MDVRNKTLWILRDYVYILIGAAITAVSFNVFLLPNKIAAGGVSGISTILQSYGFEAAYVQWIINIPLFIAGVILLGGKFG
LKTLAGSVFLPLVVFLTRDIQPATHHELLAAIFGGVGIGIGIGIVYLGKGSTGGTALAAQIIHKYSGLSLGKCLAIIDGM
IVVTAMIVFNIEQGLYAMLGVYVSSKTIDVVQVGFNRSKMALIITKQEQAVKEAVLQKIDRGVTKISAVGGYTDDDRPIL
MCVVGQTEFTKLKQIVKQIDESAFVIVADASEVLGEGFKRA

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVJA_BACSU (O34792)

Other databases:

- EMBL:   AF017113
- EMBL:   AL009126
- PIR:   D70042
- RefSeq:   NP_391408.1
- ProteinModelPortal:   O34792
- SMR:   O34792
- EnsemblBacteria:   EBBACT00000002350
- GeneID:   938534
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35280
- NMPDR:   fig|224308.1.peg.3534
- GenoList:   BSU35280
- GeneTree:   EBGT00070000032078
- HOGENOM:   HBG475521
- OMA:   AQIIHKY
- ProtClustDB:   CLSK2518280
- BioCyc:   BSUB:BSU35280-MONOMER
- InterPro:   IPR003740
- InterPro:   IPR019264

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179

EC number: NA

Molecular weight: Translated: 29985; Mature: 29985

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11bdcd20)-; HASH(0x127b5ddc)-; HASH(0x12887bec)-; HASH(0x12ea924c)-; HASH(0x12a45a34)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRNKTLWILRDYVYILIGAAITAVSFNVFLLPNKIAAGGVSGISTILQSYGFEAAYVQ
CCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHH
WIINIPLFIAGVILLGGKFGLKTLAGSVFLPLVVFLTRDIQPATHHELLAAIFGGVGIGI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
GIGIVYLGKGSTGGTALAAQIIHKYSGLSLGKCLAIIDGMIVVTAMIVFNIEQGLYAMLG
EEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVSSKTIDVVQVGFNRSKMALIITKQEQAVKEAVLQKIDRGVTKISAVGGYTDDDRPIL
HHHCCCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEE
MCVVGQTEFTKLKQIVKQIDESAFVIVADASEVLGEGFKRA
EEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCH
>Mature Secondary Structure
MDVRNKTLWILRDYVYILIGAAITAVSFNVFLLPNKIAAGGVSGISTILQSYGFEAAYVQ
CCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHH
WIINIPLFIAGVILLGGKFGLKTLAGSVFLPLVVFLTRDIQPATHHELLAAIFGGVGIGI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
GIGIVYLGKGSTGGTALAAQIIHKYSGLSLGKCLAIIDGMIVVTAMIVFNIEQGLYAMLG
EEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVSSKTIDVVQVGFNRSKMALIITKQEQAVKEAVLQKIDRGVTKISAVGGYTDDDRPIL
HHHCCCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEE
MCVVGQTEFTKLKQIVKQIDESAFVIVADASEVLGEGFKRA
EEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377