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The map label for this gene is yvcA

Identifier: 16080538

GI number: 16080538

Start: 3581965

End: 3582690

Strand: Reverse

Name: yvcA

Synonym: BSU34850

Alternate gene names: 16080538

Gene position: 3582690-3581965 (Counterclockwise)

Preceding gene: 16080539

Following gene: 16080537

Centisome position: 84.99

GC content: 33.61

Gene sequence:

>726_bases
ATGAAAAAGATCATCTTTATTTGCTTCAGCTTATTACTTGCCCTGACAGGAGGATGCAGTATGAATGACAATGATAAAAA
CAGCACAAATGACAATAAAACAGAAGCGGTAAAACCAAAAGACATGGATCCCAAGGATCTGCCTCAAGTACCTGCGTTTC
AGGACGAGAAAACGAGAGAGTACATGGTGTCAACAAAAGAAGAGGAACCAGGATATTATTTGCTGGAATCTAAGCTGAAA
GGGTTTAGGATGTTGTTTCCGGAGGATGGAAAGTATCTATCAAGAAGATCATCGTTAACCGGGAAAAACAAAGAAAGTAT
TGGATTTAATAGTTATGATAAAGACACCAATGTAATGTTTGATGGCCATGTAACATATTACAAAGAAGAAAGTTTTGCGA
ATGAACCTAAGACAATGCTAGATATTGTTAGTGGAAAAAATGATTATAAAGGCGAATACAAAAAAAGCAGCAAAAAGAAA
ACGGATATTTACACTGCCAAGAAAAAAGACATCTTTGACGATATTGATAGAAAATATAATTATTCATACAGTTATTTTGG
ATATGTTAAGTCTACAGAGGAAGATAACCTAGGAGTAGAATACGCCTTTACCCTTGGATGCAAAAATGAAAATCAACCAT
GCTCCTTAGATGAAGAAAAGGCTAAAAATAAAGTTGAGAAATTAATTAATTCTATCACCTTTTTAATAGATAAAAAGGAG
AAATAA

Upstream 100 bases:

>100_bases
CATGAAAAAGGATGAAATAATCATCTCTTAACCAGGTCAATAGAATTATTTTTGATATAAAAATAGAATACTATTCTCAC
AAAACCCGTGGAGGTTCGTA

Downstream 100 bases:

>100_bases
GATGGGAAATAAAAATGTATTTGAGAATGAGAACGTAAAGTTAAGGTTAATTGATTTAGAATATGACTATAAACAAAAGT
TTGCCTCAACTATTGCGAGT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKKIIFICFSLLLALTGGCSMNDNDKNSTNDNKTEAVKPKDMDPKDLPQVPAFQDEKTREYMVSTKEEEPGYYLLESKLK
GFRMLFPEDGKYLSRRSSLTGKNKESIGFNSYDKDTNVMFDGHVTYYKEESFANEPKTMLDIVSGKNDYKGEYKKSSKKK
TDIYTAKKKDIFDDIDRKYNYSYSYFGYVKSTEEDNLGVEYAFTLGCKNENQPCSLDEEKAKNKVEKLINSITFLIDKKE
K

Sequences:

>Translated_241_residues
MKKIIFICFSLLLALTGGCSMNDNDKNSTNDNKTEAVKPKDMDPKDLPQVPAFQDEKTREYMVSTKEEEPGYYLLESKLK
GFRMLFPEDGKYLSRRSSLTGKNKESIGFNSYDKDTNVMFDGHVTYYKEESFANEPKTMLDIVSGKNDYKGEYKKSSKKK
TDIYTAKKKDIFDDIDRKYNYSYSYFGYVKSTEEDNLGVEYAFTLGCKNENQPCSLDEEKAKNKVEKLINSITFLIDKKE
K
>Mature_241_residues
MKKIIFICFSLLLALTGGCSMNDNDKNSTNDNKTEAVKPKDMDPKDLPQVPAFQDEKTREYMVSTKEEEPGYYLLESKLK
GFRMLFPEDGKYLSRRSSLTGKNKESIGFNSYDKDTNVMFDGHVTYYKEESFANEPKTMLDIVSGKNDYKGEYKKSSKKK
TDIYTAKKKDIFDDIDRKYNYSYSYFGYVKSTEEDNLGVEYAFTLGCKNENQPCSLDEEKAKNKVEKLINSITFLIDKKE
K

Specific function: Required for complex colony architecture

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVCA_BACSU (O06965)

Other databases:

- EMBL:   AF017113
- EMBL:   AL009126
- EMBL:   Z94043
- PIR:   B70031
- RefSeq:   NP_391365.1
- ProteinModelPortal:   O06965
- EnsemblBacteria:   EBBACT00000000225
- GeneID:   936576
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34850
- NMPDR:   fig|224308.1.peg.3491
- GenoList:   BSU34850
- GeneTree:   EBGT00070000032462
- OMA:   EDESTIF
- ProtClustDB:   CLSK2752522
- BioCyc:   BSUB:BSU34850-MONOMER
- InterPro:   IPR004983

Pfam domain/function: PF03304 Mlp

EC number: NA

Molecular weight: Translated: 27872; Mature: 27872

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIFICFSLLLALTGGCSMNDNDKNSTNDNKTEAVKPKDMDPKDLPQVPAFQDEKTRE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHH
YMVSTKEEEPGYYLLESKLKGFRMLFPEDGKYLSRRSSLTGKNKESIGFNSYDKDTNVMF
HHHCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
DGHVTYYKEESFANEPKTMLDIVSGKNDYKGEYKKSSKKKTDIYTAKKKDIFDDIDRKYN
CCCEEEEECCHHCCCCHHHHHHHCCCCCCCCHHHHCCCCHHHHECCHHHHHHHHHHHHCC
YSYSYFGYVKSTEEDNLGVEYAFTLGCKNENQPCSLDEEKAKNKVEKLINSITFLIDKKE
CCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCC
K
C
>Mature Secondary Structure
MKKIIFICFSLLLALTGGCSMNDNDKNSTNDNKTEAVKPKDMDPKDLPQVPAFQDEKTRE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHH
YMVSTKEEEPGYYLLESKLKGFRMLFPEDGKYLSRRSSLTGKNKESIGFNSYDKDTNVMF
HHHCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
DGHVTYYKEESFANEPKTMLDIVSGKNDYKGEYKKSSKKKTDIYTAKKKDIFDDIDRKYN
CCCEEEEECCHHCCCCHHHHHHHCCCCCCCCHHHHCCCCHHHHECCHHHHHHHHHHHHCC
YSYSYFGYVKSTEEDNLGVEYAFTLGCKNENQPCSLDEEKAKNKVEKLINSITFLIDKKE
CCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377