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The map label for this gene is padC

Identifier: 16080493

GI number: 16080493

Start: 3532325

End: 3532810

Strand: Reverse

Name: padC

Synonym: BSU34400

Alternate gene names: 16080493

Gene position: 3532810-3532325 (Counterclockwise)

Preceding gene: 16080494

Following gene: 16080490

Centisome position: 83.8

GC content: 39.09

Gene sequence:

>486_bases
ATGGAAAACTTTATCGGAAGCCACATGATTTATACGTATGAAAACGGATGGGAATACGAGATTTATATTAAAAACGACCA
TACAATTGATTATAGAATTCATAGCGGAATGGTTGCCGGACGCTGGGTTCGAGATCAGGAAGTGAATATTGTCAAACTGA
CAGAAGGCGTATATAAAGTGTCTTGGACAGAGCCGACTGGCACGGATGTTTCATTAAACTTTATGCCAAATGAAAAACGC
ATGCATGGCATTATTTTCTTCCCGAAATGGGTGCATGAACATCCTGAAATTACGGTTTGCTACCAAAATGACCACATTGA
TTTGATGAAAGAATCCCGCGAAAAATATGAAACGTATCCAAAATACGTTGTACCTGAATTTGCGGAAATTACATTTCTGA
AAAATGAAGGAGTCGACAACGAAGAAGTGATTTCGAAGGCTCCTTATGAGGGAATGACAGACGATATTCGCGCGGGAAGA
TTATAA

Upstream 100 bases:

>100_bases
CTCCATGACCGCTTGTTTATCGGTTCCGCAGAAAGAACCCCTGATTACGTTCTACTAGACATTTATGAAGTACAGTAAAA
GACTAAGGAGAGTGTGTAAG

Downstream 100 bases:

>100_bases
TAAACATAAAAACCCGGAAAAGAGAATTACTTCTCTTTTCCGGGTTTTCTTTTTGCTGAGTATGCGGGAACCATCACAAT
TCCCGCGAAAAACAGTATGA

Product: phenolic acid decarboxylase

Products: NA

Alternate protein names: PAD

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNIVKLTEGVYKVSWTEPTGTDVSLNFMPNEKR
MHGIIFFPKWVHEHPEITVCYQNDHIDLMKESREKYETYPKYVVPEFAEITFLKNEGVDNEEVISKAPYEGMTDDIRAGR
L

Sequences:

>Translated_161_residues
MENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNIVKLTEGVYKVSWTEPTGTDVSLNFMPNEKR
MHGIIFFPKWVHEHPEITVCYQNDHIDLMKESREKYETYPKYVVPEFAEITFLKNEGVDNEEVISKAPYEGMTDDIRAGR
L
>Mature_161_residues
MENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNIVKLTEGVYKVSWTEPTGTDVSLNFMPNEKR
MHGIIFFPKWVHEHPEITVCYQNDHIDLMKESREKYETYPKYVVPEFAEITFLKNEGVDNEEVISKAPYEGMTDDIRAGR
L

Specific function: Involved in the decarboxylation and detoxification of phenolic derivatives. It is able to catalyze the decarboxylation of ferulic, p-coumaric and caffeic acids

COG id: COG3479

COG function: function code Q; Phenolic acid decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the padC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PADC_BACSU (O07006)

Other databases:

- EMBL:   AF017117
- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   D69671
- RefSeq:   NP_391320.1
- PDB:   2P8G
- PDBsum:   2P8G
- ProteinModelPortal:   O07006
- SMR:   O07006
- EnsemblBacteria:   EBBACT00000001851
- GeneID:   938579
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34400
- NMPDR:   fig|224308.1.peg.3446
- GenoList:   BSU34400
- GeneTree:   EBGT00050000002969
- HOGENOM:   HBG338339
- OMA:   DYRIHSG
- ProtClustDB:   CLSK874730
- BioCyc:   BSUB:BSU34400-MONOMER
- GO:   GO:0005488
- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR008729
- Gene3D:   G3DSA:2.40.128.20
- PIRSF:   PIRSF011561
- ProDom:   PD022010

Pfam domain/function: PF05870 PA_decarbox; SSF50814 Calycin

EC number: NA

Molecular weight: Translated: 19077; Mature: 19077

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNIVKLTEGVYKV
CCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEECCEEEE
SWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHEHPEITVCYQNDHIDLMKESREKYETYP
EECCCCCCEEEEEECCCCCCEEEEEEEEHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCC
KYVVPEFAEITFLKNEGVDNEEVISKAPYEGMTDDIRAGRL
CCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MENFIGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNIVKLTEGVYKV
CCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEECCEEEE
SWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHEHPEITVCYQNDHIDLMKESREKYETYP
EECCCCCCEEEEEECCCCCCEEEEEEEEHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCC
KYVVPEFAEITFLKNEGVDNEEVISKAPYEGMTDDIRAGRL
CCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9546183; 9384377