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The map label for this gene is epsL

Identifier: 16080478

GI number: 16080478

Start: 3516880

End: 3517488

Strand: Reverse

Name: epsL

Synonym: BSU34250

Alternate gene names: 16080478

Gene position: 3517488-3516880 (Counterclockwise)

Preceding gene: 255767769

Following gene: 16080477

Centisome position: 83.44

GC content: 48.6

Gene sequence:

>609_bases
TTGATCCTGAAACGACTTTTTGATCTGACGGCCGCCATTTTTTTGTTGTGCTGTACAAGTGTGATCATTCTGTTCACCAT
CGCCGTTGTCAGGCTGAAAATAGGATCACCTGTCTTCTTTAAGCAAGTAAGGCCGGGCCTGCACGGCAAACCGTTCACCC
TATATAAGTTCCGGACAATGACGGATGAACGGGACAGTAAAGGAAATCTGCTGCCTGATGAAGTCCGGCTGACGAAAACG
GGCAGGCTGATCAGAAAGCTGAGCATTGATGAGCTTCCGCAGCTCCTGAATGTCCTGAAGGGCGATCTGAGCCTTGTCGG
GCCGCGGCCGCTTTTGATGGACTATCTGCCTCTTTATACAGAAAAACAGGCACGGCGCCATGAGGTGAAGCCGGGTATCA
CAGGCTGGGCGCAAATCAATGGCAGAAACGCGATTTCCTGGGAAAAGAAATTTGAATTAGATGTTTGGTACGTTGACAAC
TGGTCATTTTTTCTCGATTTGAAAATTTTATGTTTGACGGTGCGAAAGGTCCTTGTTTCAGAAGGGATTCAGCAAACCAA
TCATGTGACCGCGGAACGGTTTACCGGAAGCGGAGATGTGTCCTCATGA

Upstream 100 bases:

>100_bases
GCTTTTGCTACGCTGTTTTCGCTTTTATGCTCGTTTGTACAAAAGAGGAAAGACAGCTGGTATTAAAACGGTTTCGAAAA
ACGAAAGGAGCTGTGAATCT

Downstream 100 bases:

>100_bases
AAAATGTGGCCATTGTGGGTGACGGCGGTCACGGAAAGGTGATCAGAGAGCTGATAAACGCCCGCTCAGATACGCGCTTA
GCCGCGGTGCTGGATGATAA

Product: phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MILKRLFDLTAAIFLLCCTSVIILFTIAVVRLKIGSPVFFKQVRPGLHGKPFTLYKFRTMTDERDSKGNLLPDEVRLTKT
GRLIRKLSIDELPQLLNVLKGDLSLVGPRPLLMDYLPLYTEKQARRHEVKPGITGWAQINGRNAISWEKKFELDVWYVDN
WSFFLDLKILCLTVRKVLVSEGIQQTNHVTAERFTGSGDVSS

Sequences:

>Translated_202_residues
MILKRLFDLTAAIFLLCCTSVIILFTIAVVRLKIGSPVFFKQVRPGLHGKPFTLYKFRTMTDERDSKGNLLPDEVRLTKT
GRLIRKLSIDELPQLLNVLKGDLSLVGPRPLLMDYLPLYTEKQARRHEVKPGITGWAQINGRNAISWEKKFELDVWYVDN
WSFFLDLKILCLTVRKVLVSEGIQQTNHVTAERFTGSGDVSS
>Mature_202_residues
MILKRLFDLTAAIFLLCCTSVIILFTIAVVRLKIGSPVFFKQVRPGLHGKPFTLYKFRTMTDERDSKGNLLPDEVRLTKT
GRLIRKLSIDELPQLLNVLKGDLSLVGPRPLLMDYLPLYTEKQARRHEVKPGITGWAQINGRNAISWEKKFELDVWYVDN
WSFFLDLKILCLTVRKVLVSEGIQQTNHVTAERFTGSGDVSS

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family

Homologues:

Organism=Escherichia coli, GI1788360, Length=191, Percent_Identity=39.7905759162304, Blast_Score=133, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EPSL_BACSU (P71062)

Other databases:

- EMBL:   Z71928
- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   D70037
- RefSeq:   NP_391305.1
- EnsemblBacteria:   EBBACT00000003109
- GeneID:   936365
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34250
- NMPDR:   fig|224308.1.peg.3431
- GenoList:   BSU34250
- GeneTree:   EBGT00050000002329
- HOGENOM:   HBG695824
- OMA:   KPFEMIK
- ProtClustDB:   CLSK887907
- BioCyc:   BSUB:BSU34250-MONOMER
- InterPro:   IPR003362

Pfam domain/function: PF02397 Bac_transf

EC number: NA

Molecular weight: Translated: 23079; Mature: 23079

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x40bf4d90)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKRLFDLTAAIFLLCCTSVIILFTIAVVRLKIGSPVFFKQVRPGLHGKPFTLYKFRTM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEEEC
TDERDSKGNLLPDEVRLTKTGRLIRKLSIDELPQLLNVLKGDLSLVGPRPLLMDYLPLYT
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH
EKQARRHEVKPGITGWAQINGRNAISWEKKFELDVWYVDNWSFFLDLKILCLTVRKVLVS
HHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
EGIQQTNHVTAERFTGSGDVSS
HHHHHHCCHHHHHCCCCCCCCH
>Mature Secondary Structure
MILKRLFDLTAAIFLLCCTSVIILFTIAVVRLKIGSPVFFKQVRPGLHGKPFTLYKFRTM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEEEC
TDERDSKGNLLPDEVRLTKTGRLIRKLSIDELPQLLNVLKGDLSLVGPRPLLMDYLPLYT
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH
EKQARRHEVKPGITGWAQINGRNAISWEKKFELDVWYVDNWSFFLDLKILCLTVRKVLVS
HHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
EGIQQTNHVTAERFTGSGDVSS
HHHHHHCCHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377