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The map label for this gene is ganP

Identifier: 16080468

GI number: 16080468

Start: 3505957

End: 3507213

Strand: Reverse

Name: ganP

Synonym: BSU34150

Alternate gene names: 16080468

Gene position: 3507213-3505957 (Counterclockwise)

Preceding gene: 16080469

Following gene: 16080467

Centisome position: 83.2

GC content: 42.96

Gene sequence:

>1257_bases
GTGCAGCATCGTCAAGTCGCTTTGTTGCTTTCTATCATTCCGGGACTCGGGCAATTTTATAACAAGCAATGGATAAAAGG
TATTGTCTTTCTTTTCTTAGGCGCATCGTTTTTTGCGGTCTTTGGAGATCTGCTCAATATGGGGTTTTGGGGAATCTTTA
CACTGGGAACAGAAGTGCCGCGGGATAATTCCGTTTTTCTGCTGGCGGAAGGGATTATTGCTGTCATCGTGACCTGCTTT
GGCCTTGCGGTGTATTATGTAAATCTTCGCGATGCGTTCCAAAGCGGAAAACAGCGTGATGAAAATAAGCCATTAAGTTC
CTTAAAGGAACAATACCAGCATATCATTTCTGAGGGCTATCCTTATGTCGTCAGCGGCCCATCTTTGTTTATTTTAATTT
TCGCCGTGATCTTTCCTATCTTATTCAGCTTTGCATTAGCGTTTACAAACTATGATTTGTATCATTCTCCTCCTGCAAAA
TTAATTGATTGGGTCGGTTTTCAAACGTTCGCAAATATTTTCACAGTTGATATTTGGAGGTCGACTTTTTTTGATGTACT
GGCTTGGACGGTGGTTTGGACACTTGCTGCATCCACACTGCAAGTCACCTTGGGGATTTTTCTCGCGATCATTGTTAACC
AGAAAGACCTTCGGTTTAAACGTTTTTTTCGGACGATTCTGATTTTGCCATGGGCCGTTCCCGGTTTTGTGACGATTTTA
ATTTTTGCGGGACTGTTTAATGATAGCTTCGGTGCGATGAATCACGACATCTTGGCTTTCTTCGGGATAGATCCGCTTCC
GTGGATGACAGATGCCAATTGGTCGAGGCTTGCATTGATTCTCATGCAGGGCTGGCTCGGATTTCCGTACATCTTTCTCG
TCTCAACAGGCGTATTGCAATCCATCCCGGACGATCTGTATGAAGCAGCTACGATTGATGGCGCTTCTGTCTTTTCAAAG
CTGAGATACATCACGCTTCCGATGGTGTTCATTGCAATGGCTCCGATTATCATTACTCAGTTTACGTTTAACTTTAATAA
CTTTAATATTATCTATCTATTCAATGGCGGAGGTCCGGCTGTAACCGGATCAACAGCCGGCGGGACAGATATCCTCGTTT
CATGGATTTATAAATTGACAATGCAGTCCAGCCAATATTCACTTGCTGCGGCTTTAACCATTTTATTATCTGTATTTGTT
ATCTCCATCGCATTGTGGCAGTTCAGACAGACAAAGTCTTTTAAAGAGGAGGCATAA

Upstream 100 bases:

>100_bases
ATTGGATCAAGCAGCTGAAACGGCCAAAGGACAAATTAAGGCAAAGCACAGCGGAAAATAAAGAGAAAGCTAGATTTGTA
TTGTAAGAGAGGTGAAAACG

Downstream 100 bases:

>100_bases
GGTATGCTGGCAGATATGAAAGTCAGAAGATATATCCGTCTCCTTTTCTCTTACTTGTTGCTAGCCTTTATGGCGGTCAT
CATTGTTTATCCTCTCCTTT

Product: arabinogalactan oligomer permease

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MQHRQVALLLSIIPGLGQFYNKQWIKGIVFLFLGASFFAVFGDLLNMGFWGIFTLGTEVPRDNSVFLLAEGIIAVIVTCF
GLAVYYVNLRDAFQSGKQRDENKPLSSLKEQYQHIISEGYPYVVSGPSLFILIFAVIFPILFSFALAFTNYDLYHSPPAK
LIDWVGFQTFANIFTVDIWRSTFFDVLAWTVVWTLAASTLQVTLGIFLAIIVNQKDLRFKRFFRTILILPWAVPGFVTIL
IFAGLFNDSFGAMNHDILAFFGIDPLPWMTDANWSRLALILMQGWLGFPYIFLVSTGVLQSIPDDLYEAATIDGASVFSK
LRYITLPMVFIAMAPIIITQFTFNFNNFNIIYLFNGGGPAVTGSTAGGTDILVSWIYKLTMQSSQYSLAAALTILLSVFV
ISIALWQFRQTKSFKEEA

Sequences:

>Translated_418_residues
MQHRQVALLLSIIPGLGQFYNKQWIKGIVFLFLGASFFAVFGDLLNMGFWGIFTLGTEVPRDNSVFLLAEGIIAVIVTCF
GLAVYYVNLRDAFQSGKQRDENKPLSSLKEQYQHIISEGYPYVVSGPSLFILIFAVIFPILFSFALAFTNYDLYHSPPAK
LIDWVGFQTFANIFTVDIWRSTFFDVLAWTVVWTLAASTLQVTLGIFLAIIVNQKDLRFKRFFRTILILPWAVPGFVTIL
IFAGLFNDSFGAMNHDILAFFGIDPLPWMTDANWSRLALILMQGWLGFPYIFLVSTGVLQSIPDDLYEAATIDGASVFSK
LRYITLPMVFIAMAPIIITQFTFNFNNFNIIYLFNGGGPAVTGSTAGGTDILVSWIYKLTMQSSQYSLAAALTILLSVFV
ISIALWQFRQTKSFKEEA
>Mature_418_residues
MQHRQVALLLSIIPGLGQFYNKQWIKGIVFLFLGASFFAVFGDLLNMGFWGIFTLGTEVPRDNSVFLLAEGIIAVIVTCF
GLAVYYVNLRDAFQSGKQRDENKPLSSLKEQYQHIISEGYPYVVSGPSLFILIFAVIFPILFSFALAFTNYDLYHSPPAK
LIDWVGFQTFANIFTVDIWRSTFFDVLAWTVVWTLAASTLQVTLGIFLAIIVNQKDLRFKRFFRTILILPWAVPGFVTIL
IFAGLFNDSFGAMNHDILAFFGIDPLPWMTDANWSRLALILMQGWLGFPYIFLVSTGVLQSIPDDLYEAATIDGASVFSK
LRYITLPMVFIAMAPIIITQFTFNFNNFNIIYLFNGGGPAVTGSTAGGTDILVSWIYKLTMQSSQYSLAAALTILLSVFV
ISIALWQFRQTKSFKEEA

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1790465, Length=253, Percent_Identity=40.7114624505929, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1787570, Length=224, Percent_Identity=27.2321428571429, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1789861, Length=303, Percent_Identity=27.0627062706271, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GANP_BACSU (O32261)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   D70038
- RefSeq:   NP_391295.1
- ProteinModelPortal:   O32261
- SMR:   O32261
- EnsemblBacteria:   EBBACT00000002868
- GeneID:   936323
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34150
- NMPDR:   fig|224308.1.peg.3421
- GenoList:   BSU34150
- GeneTree:   EBGT00050000000647
- HOGENOM:   HBG739365
- OMA:   VIRTIFV
- ProtClustDB:   CLSK873200
- BioCyc:   BSUB:BSU34150-MONOMER
- InterPro:   IPR000515
- InterPro:   IPR007829

Pfam domain/function: PF00528 BPD_transp_1; PF05154 TM2

EC number: NA

Molecular weight: Translated: 46979; Mature: 46979

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x122614ac)-; HASH(0x1209d474)-; HASH(0x12161ec8)-; HASH(0x12a993c0)-; HASH(0x40bf5f0c)-; HASH(0x40c0169c)-; HASH(0x11c8d04c)-; HASH(0x123ac04c)-; HASH(0x129f9738)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure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ECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377