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The map label for this gene is sdpI

Identifier: 16080431

GI number: 16080431

Start: 3466434

End: 3467057

Strand: Reverse

Name: sdpI

Synonym: BSU33780

Alternate gene names: 16080431

Gene position: 3467057-3466434 (Counterclockwise)

Preceding gene: 16080432

Following gene: 16080426

Centisome position: 82.24

GC content: 28.69

Gene sequence:

>624_bases
ATGAAGAAAAATATAATTTCCATAATTATTGTATGTTTGAGTTTCTTGACTTCAATTATATTATATCAATACCTTCCAGA
AGAAATACCGATACAATGGTCAGGAAATAAACCGGCTGCAATTGTATCTAAACCTTTAACAATATTTATTATACCTGTTG
TTATGCTTATTTATTATCTTACTTTTTATATGTTAACTATTAAGTCTACACAAAAAAATAAAGCATTGCTTTTCCTAGCT
TCTAATAATATGTTAATCCTTTTATATATTTTACAACTCTCAACTCTATTGATAAGTTTAGGATACGAAGTGAATATTGA
TTTAATAATAGGGCTTGGTGTTGGTATCTTTTTAATTATTGGTGGAAATTCTATGCAGCTAGCAGAACAAAACCATCTTA
TTGGATTGAGGACACCTTGGACATTAAAAGATGAGACTGTTTGGAAACTGGGAAATCGCTTTGCCTCTAAAGTACTTGTA
GTGTGTGGTTTTATAATAGCTGTTCTTTCATTTTTTACAGGAGAATATATAATTCTTATTATGATTGTGCTAGTTCTTCT
AGCATTAGTTATTTCAACACTAGCTTCATATCATTATTACAAAAAATTAAACGGTTCACGTTGA

Upstream 100 bases:

>100_bases
ATCGCAAAGGACAATTTATTTATTACTCTCTAAATACAACAGTACTTCAAGACTCAATAAATTGGATGCTTAACTTTATA
AATAAAGGGGATAACGATTT

Downstream 100 bases:

>100_bases
AAAAGTGTCTTGCGGAGCAATCCGCAAGACACTCAATTATAATGGATTATTGATGAATCAATTTTAGGGTTTTTGCAGCA
GCCGCTTCTAAATCAGAATT

Product: integral inner membrane regulator of autophagy

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKKNIISIIIVCLSFLTSIILYQYLPEEIPIQWSGNKPAAIVSKPLTIFIIPVVMLIYYLTFYMLTIKSTQKNKALLFLA
SNNMLILLYILQLSTLLISLGYEVNIDLIIGLGVGIFLIIGGNSMQLAEQNHLIGLRTPWTLKDETVWKLGNRFASKVLV
VCGFIIAVLSFFTGEYIILIMIVLVLLALVISTLASYHYYKKLNGSR

Sequences:

>Translated_207_residues
MKKNIISIIIVCLSFLTSIILYQYLPEEIPIQWSGNKPAAIVSKPLTIFIIPVVMLIYYLTFYMLTIKSTQKNKALLFLA
SNNMLILLYILQLSTLLISLGYEVNIDLIIGLGVGIFLIIGGNSMQLAEQNHLIGLRTPWTLKDETVWKLGNRFASKVLV
VCGFIIAVLSFFTGEYIILIMIVLVLLALVISTLASYHYYKKLNGSR
>Mature_207_residues
MKKNIISIIIVCLSFLTSIILYQYLPEEIPIQWSGNKPAAIVSKPLTIFIIPVVMLIYYLTFYMLTIKSTQKNKALLFLA
SNNMLILLYILQLSTLLISLGYEVNIDLIIGLGVGIFLIIGGNSMQLAEQNHLIGLRTPWTLKDETVWKLGNRFASKVLV
VCGFIIAVLSFFTGEYIILIMIVLVLLALVISTLASYHYYKKLNGSR

Specific function: Immunity protein that provides protection for the cell against the toxic effects of its own sdpC killing factor, and that functions as a receptor/signal transduction protein as well. Once sdpC accumulates in the extracellular milieu, sdpI binds to sdpC, c

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SDPI_BACSU (O32241)

Other databases:

- EMBL:   AL009126
- PIR:   C70029
- RefSeq:   NP_391258.1
- ProteinModelPortal:   O32241
- EnsemblBacteria:   EBBACT00000003493
- GeneID:   936238
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33780
- NMPDR:   fig|224308.1.peg.3384
- GenoList:   BSU33780
- GeneTree:   EBGT00050000004189
- OMA:   FASTYSA
- BioCyc:   BSUB:BSU33780-MONOMER
- InterPro:   IPR012867

Pfam domain/function: PF07853 DUF1648

EC number: NA

Molecular weight: Translated: 23294; Mature: 23294

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x116625cc)-; HASH(0x126d948c)-; HASH(0x1263cf24)-; HASH(0x10585fec)-; HASH(0x10b576ac)-; HASH(0x120a2848)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIISIIIVCLSFLTSIILYQYLPEEIPIQWSGNKPAAIVSKPLTIFIIPVVMLIYYL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHHH
TFYMLTIKSTQKNKALLFLASNNMLILLYILQLSTLLISLGYEVNIDLIIGLGVGIFLII
HHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEE
GGNSMQLAEQNHLIGLRTPWTLKDETVWKLGNRFASKVLVVCGFIIAVLSFFTGEYIILI
CCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MIVLVLLALVISTLASYHYYKKLNGSR
HHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MKKNIISIIIVCLSFLTSIILYQYLPEEIPIQWSGNKPAAIVSKPLTIFIIPVVMLIYYL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHHH
TFYMLTIKSTQKNKALLFLASNNMLILLYILQLSTLLISLGYEVNIDLIIGLGVGIFLII
HHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEE
GGNSMQLAEQNHLIGLRTPWTLKDETVWKLGNRFASKVLVVCGFIIAVLSFFTGEYIILI
CCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MIVLVLLALVISTLASYHYYKKLNGSR
HHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377