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The map label for this gene is bdbD

Identifier: 16080401

GI number: 16080401

Start: 3438065

End: 3438733

Strand: Reverse

Name: bdbD

Synonym: BSU33480

Alternate gene names: 16080401

Gene position: 3438733-3438065 (Counterclockwise)

Preceding gene: 255767764

Following gene: 16080400

Centisome position: 81.57

GC content: 41.85

Gene sequence:

>669_bases
GTGAAAAAGAAACAGCAGTCTTCTGCGAAATTCGCGGTCATCCTTACGGTTGTGGTTGTTGTATTGCTAGCAGCCATTGT
CATCATTAATAACAAAACGGAACAAGGCAATGATGCGGTGTCCGGACAGCCGTCTATCAAAGGGCAGCCTGTGCTTGGCA
AGGACGATGCACCGGTAACTGTAGTAGAATTCGGAGATTACAAATGTCCGTCTTGCAAGGTGTTTAACAGTGACATCTTT
CCAAAAATACAAAAAGACTTTATTGATAAGGGCGATGTGAAATTTTCTTTCGTGAACGTCATGTTCCATGGAAAAGGTTC
AAGGTTAGCGGCTCTTGCATCTGAAGAAGTATGGAAGGAAGACCCTGACTCTTTCTGGGATTTCCATGAAAAGCTGTTCG
AAAAACAGCCGGATACGGAACAGGAATGGGTAACCCCAGGCCTCCTTGGTGATCTTGCAAAAAGCACCACAAAGATAAAA
CCTGAGACGCTCAAGGAAAATCTTGATAAGGAAACATTCGCTTCTCAAGTGGAAAAGGATTCTGACCTTAATCAAAAAAT
GAACATACAGGCAACACCGACGATTTACGTCAATGATAAAGTGATCAAAAATTTTGCGGATTATGATGAAATCAAAGAGA
CAATAGAAAAAGAGCTGAAAGGGAAGTAA

Upstream 100 bases:

>100_bases
TTTTTCGGGGTTTTCTTATCAGCGCTTGTCTTGTTAAAATAAAGAAGTGGGTCAATTGCGATCCGCTTCTTTTTTAATTT
TAAAACGATGAGGTGTCGGA

Downstream 100 bases:

>100_bases
CAATATGAAAAATAGAATCGTATTTTTATATGCTTCCTGGGTTGTGGCTCTTATCGCTATGCTGGGCAGCCTGTATTTCA
GTGAAATCAGAAAGTTTATT

Product: thiol-disulfide oxidoreductase

Products: NA

Alternate protein names: Disulfide oxidoreductase D; Thiol-disulfide oxidoreductase D

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKKKQQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIF
PKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIK
PETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVNDKVIKNFADYDEIKETIEKELKGK

Sequences:

>Translated_222_residues
MKKKQQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIF
PKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIK
PETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVNDKVIKNFADYDEIKETIEKELKGK
>Mature_222_residues
MKKKQQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIF
PKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIK
PETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVNDKVIKNFADYDEIKETIEKELKGK

Specific function: Required for the stabilization, possibly via formation of a disulfide bond, of the obligatory competence protein ComGC. May be required for the stability of secreted proteins with disulfide bonds. Not required for sporulation

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BDBD_BACSU (O32218)

Other databases:

- EMBL:   AL009126
- PIR:   C70041
- RefSeq:   NP_391228.1
- PDB:   3EU3
- PDB:   3EU4
- PDB:   3GH9
- PDB:   3GHA
- PDBsum:   3EU3
- PDBsum:   3EU4
- PDBsum:   3GH9
- PDBsum:   3GHA
- ProteinModelPortal:   O32218
- SMR:   O32218
- EnsemblBacteria:   EBBACT00000000876
- GeneID:   936031
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33480
- NMPDR:   fig|224308.1.peg.3354
- GenoList:   BSU33480
- GeneTree:   EBGT00050000001694
- HOGENOM:   HBG693977
- OMA:   PPKAHIP
- ProtClustDB:   CLSK2752512
- BioCyc:   BSUB:BSU33480-MONOMER
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10

Pfam domain/function: SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 24906; Mature: 24906

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00194 THIOREDOXIN_1; PS51352 THIOREDOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKQQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKGQPVLGKDDAPVT
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKE
EEECCCCCCCCCEEECCCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHC
DPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKD
CCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCC
SDLNQKMNIQATPTIYVNDKVIKNFADYDEIKETIEKELKGK
CCCCCCCCEEECCEEEECHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKQQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKGQPVLGKDDAPVT
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKE
EEECCCCCCCCCEEECCCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHC
DPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKD
CCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCC
SDLNQKMNIQATPTIYVNDKVIKNFADYDEIKETIEKELKGK
CCCCCCCCEEECCEEEECHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11844773; 11744713