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The map label for this gene is yvrP

Identifier: 16080382

GI number: 16080382

Start: 3414023

End: 3415216

Strand: Reverse

Name: yvrP

Synonym: BSU33280

Alternate gene names: 16080382

Gene position: 3415216-3414023 (Counterclockwise)

Preceding gene: 16080383

Following gene: 50812293

Centisome position: 81.01

GC content: 45.23

Gene sequence:

>1194_bases
GTGTCCAAGAAGAAAAAATGGCTTATTGGCGGTGCGATATGTGCCGGTGTGCTTGTATTGGCTGGGATCGGCGCTGGCGG
TTTTTACTTTTTTACTCACATGAACCAAGTTGCCGTATCATCGGAGCCCTATGCTGAATCGGTCGCGGTATACATGGGAG
GAGATTCAGAATCAGGCCAAACGTTTTCTGGAAAGGTTGAACCTGAGAAACAGCAGAAAGTATACATAGATTCAGAAAAA
GGCAGCATTAAAAAAACATACGTCAAAGAAGGCGATCAGGTTAAAAAGGGCGATAAGCTTTTTGAGTATGAGGGCGAGGA
TCATTCTGATGAAGTGGAGCAAGCCAATTTGCAAATTGAAATGACAAATCTGCAAATCAACCGTTTGCAAAAATCAATAA
CGGAAACGGAAAAAAAGCTGAAAGTTGCAGGAAAAGAAGAGAAAAACCAGCTTCAAGATGAACTTGATCAAACCAATTTC
GATTTGAAAACAAGCCAGCTTGAACTGAAGCAGCATCAAAAAGAACTGGCTGGCCTGACGAAAAACAAAGGTTCCAATGT
CATTACAAGCAAGCATGACGGAATCGTTCAAAGCGTCAATCAGGATATCGCTGACGGTGCAACAGGCGACCAGGCAGCAG
GCCCGTATATCCAGATTGTTTCGACAGGCAAATATCTGGTCAAAAGCCAAATCAATGAGCTGTTAATGGACACGATCAAA
AAAGGCAGCAAAGTCAGGGTCACGCTGAAAACAGGCGGTGAGGGCGAGTGGAAAGGAAAGGTCACCTCGATCGGCAAGCT
TCCAGCGGGAGCAGGCGAGGGTGAAGAATCAGAAAGCTTTGCTGATGAAGAAATGAATCCCCAGTCCTCTAACTATCCTT
TCACCATTTTATTAGACAGCCATAAAGGTCTTGAAGTCGGCTATCATGTCAACATCGAAGTGATGAGTGATAATGCTGAT
GCGGACACGATCAAGCTGCCGTCCGACATGGTCATTCAGGATGACGGCGAACCGTACGTATGGAAAGCTGATGAGAATCA
CAAAGCGGTTAAGCAGCCTGTTGAAATCGGAGAGACTGATGAAAATGACATGGTGGAAATTAAGAGCGGCCTGACGCCGG
AAGATTATGTGATCTATCCTGATCCCGCGGTCAAGGAAGGAAAGCAGGTTACAGTCAATGCTGACACTGAATAA

Upstream 100 bases:

>100_bases
TCATTTCAATAAAAGGATTGCAAGTCTTTTTGAATTAATAGATAATATTGGTTAGAATGTTTCGAAAATATTACATAGTT
TACAGAAAGAGGAGATCGTT

Downstream 100 bases:

>100_bases
TATTTCGAAGTCGTACAAGCTGGGAAAAGAAGAAGTTCCAATCTTGAAACATATCAATCTGACCGTTCAGGCGGGGGAGT
TTTTAGCTATTATGGGGCCT

Product: ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSKKKKWLIGGAICAGVLVLAGIGAGGFYFFTHMNQVAVSSEPYAESVAVYMGGDSESGQTFSGKVEPEKQQKVYIDSEK
GSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMTNLQINRLQKSITETEKKLKVAGKEEKNQLQDELDQTNF
DLKTSQLELKQHQKELAGLTKNKGSNVITSKHDGIVQSVNQDIADGATGDQAAGPYIQIVSTGKYLVKSQINELLMDTIK
KGSKVRVTLKTGGEGEWKGKVTSIGKLPAGAGEGEESESFADEEMNPQSSNYPFTILLDSHKGLEVGYHVNIEVMSDNAD
ADTIKLPSDMVIQDDGEPYVWKADENHKAVKQPVEIGETDENDMVEIKSGLTPEDYVIYPDPAVKEGKQVTVNADTE

Sequences:

>Translated_397_residues
MSKKKKWLIGGAICAGVLVLAGIGAGGFYFFTHMNQVAVSSEPYAESVAVYMGGDSESGQTFSGKVEPEKQQKVYIDSEK
GSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMTNLQINRLQKSITETEKKLKVAGKEEKNQLQDELDQTNF
DLKTSQLELKQHQKELAGLTKNKGSNVITSKHDGIVQSVNQDIADGATGDQAAGPYIQIVSTGKYLVKSQINELLMDTIK
KGSKVRVTLKTGGEGEWKGKVTSIGKLPAGAGEGEESESFADEEMNPQSSNYPFTILLDSHKGLEVGYHVNIEVMSDNAD
ADTIKLPSDMVIQDDGEPYVWKADENHKAVKQPVEIGETDENDMVEIKSGLTPEDYVIYPDPAVKEGKQVTVNADTE
>Mature_396_residues
SKKKKWLIGGAICAGVLVLAGIGAGGFYFFTHMNQVAVSSEPYAESVAVYMGGDSESGQTFSGKVEPEKQQKVYIDSEKG
SIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMTNLQINRLQKSITETEKKLKVAGKEEKNQLQDELDQTNFD
LKTSQLELKQHQKELAGLTKNKGSNVITSKHDGIVQSVNQDIADGATGDQAAGPYIQIVSTGKYLVKSQINELLMDTIKK
GSKVRVTLKTGGEGEWKGKVTSIGKLPAGAGEGEESESFADEEMNPQSSNYPFTILLDSHKGLEVGYHVNIEVMSDNADA
DTIKLPSDMVIQDDGEPYVWKADENHKAVKQPVEIGETDENDMVEIKSGLTPEDYVIYPDPAVKEGKQVTVNADTE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVRP_BACSU (O35007)

Other databases:

- EMBL:   AJ223978
- EMBL:   AL009126
- PIR:   B70048
- RefSeq:   NP_391209.1
- ProteinModelPortal:   O35007
- EnsemblBacteria:   EBBACT00000002450
- GeneID:   938618
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33280
- NMPDR:   fig|224308.1.peg.3335
- GenoList:   BSU33280
- GeneTree:   EBGT00050000002125
- HOGENOM:   HBG349022
- OMA:   DPFQVQG
- ProtClustDB:   CLSK337152
- BioCyc:   BSUB:BSU33280-MONOMER
- InterPro:   IPR006143
- TIGRFAMs:   TIGR01730

Pfam domain/function: PF00529 HlyD

EC number: NA

Molecular weight: Translated: 43493; Mature: 43362

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12276b34)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKKWLIGGAICAGVLVLAGIGAGGFYFFTHMNQVAVSSEPYAESVAVYMGGDSESGQ
CCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCEEEEEECCCCCCCC
TFSGKVEPEKQQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIE
EEECCCCCCCCCEEEEECCCCCEEHHHHCCCCCCCCCCCEEEECCCCCCCCHHHCEEEEE
MTNLQINRLQKSITETEKKLKVAGKEEKNQLQDELDQTNFDLKTSQLELKQHQKELAGLT
EECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
KNKGSNVITSKHDGIVQSVNQDIADGATGDQAAGPYIQIVSTGKYLVKSQINELLMDTIK
CCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHC
KGSKVRVTLKTGGEGEWKGKVTSIGKLPAGAGEGEESESFADEEMNPQSSNYPFTILLDS
CCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHCHHCCCCCCCCCCEEEEEEC
HKGLEVGYHVNIEVMSDNADADTIKLPSDMVIQDDGEPYVWKADENHKAVKQPVEIGETD
CCCEEEEEEEEEEEEECCCCCCEEECCCCEEEECCCCEEEEECCCCCHHHHCCHHCCCCC
ENDMVEIKSGLTPEDYVIYPDPAVKEGKQVTVNADTE
CCCEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCH
>Mature Secondary Structure 
SKKKKWLIGGAICAGVLVLAGIGAGGFYFFTHMNQVAVSSEPYAESVAVYMGGDSESGQ
CCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCEEEEEECCCCCCCC
TFSGKVEPEKQQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIE
EEECCCCCCCCCEEEEECCCCCEEHHHHCCCCCCCCCCCEEEECCCCCCCCHHHCEEEEE
MTNLQINRLQKSITETEKKLKVAGKEEKNQLQDELDQTNFDLKTSQLELKQHQKELAGLT
EECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
KNKGSNVITSKHDGIVQSVNQDIADGATGDQAAGPYIQIVSTGKYLVKSQINELLMDTIK
CCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHC
KGSKVRVTLKTGGEGEWKGKVTSIGKLPAGAGEGEESESFADEEMNPQSSNYPFTILLDS
CCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHCHHCCCCCCCCCCEEEEEEC
HKGLEVGYHVNIEVMSDNADADTIKLPSDMVIQDDGEPYVWKADENHKAVKQPVEIGETD
CCCEEEEEEEEEEEEECCCCCCEEECCCCEEEECCCCEEEEECCCCCHHHHCCHHCCCCC
ENDMVEIKSGLTPEDYVIYPDPAVKEGKQVTVNADTE
CCCEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377