Click here to switch to the map view.

The map label for this gene is yusD

Identifier: 16080328

GI number: 16080328

Start: 3364618

End: 3364962

Strand: Reverse

Name: yusD

Synonym: BSU32760

Alternate gene names: 16080328

Gene position: 3364962-3364618 (Counterclockwise)

Preceding gene: 16080329

Following gene: 16080327

Centisome position: 79.82

GC content: 41.16

Gene sequence:

>345_bases
ATGGAGAAAGCGGAAGTTTTAGAAGATGAGTATCAGCATCTGTTTTTAAAACCCCTTTTGAATGCCTCAACATTGCTCAT
TACCTTCCAAGGAGAAGCAGAAGCCTTAACCGTCTCAATAAACGAACAGGGAGAAATGAAAAAAGTTTCTCCGCCCCAAA
CGTCCAACCTGACCTTTTACGGAAACCAAACGGAAATTATTGATTTATTGCACGGAGACATTTCCCTTCAGCACCTTATT
CAGAGCGGAAGCCTCAAAGTAAAGGGGTCATTCAGGGCCCTGTTAAAGCTGGAAGCCATTCTCTGGCTGACAAATGGATT
TTTTCAGAGGATTTTAAAAAATTAA

Upstream 100 bases:

>100_bases
TCTCAGCATATCCAATGAAATTGTCGTTCGTTTTATAAAGGGGTTCTTGCGACAAAGAGAGAAATGTGTATGTATGACCA
ACAAATAGGAGGTTGTACAT

Downstream 100 bases:

>100_bases
AAAATAATAAATTATTATAATAGTAAAAGTTGACATCATTTATTTTATTGACATTTAATCATTCGCCGTGCTATTCTACA
TTAAGAATTTCCGGACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MEKAEVLEDEYQHLFLKPLLNASTLLITFQGEAEALTVSINEQGEMKKVSPPQTSNLTFYGNQTEIIDLLHGDISLQHLI
QSGSLKVKGSFRALLKLEAILWLTNGFFQRILKN

Sequences:

>Translated_114_residues
MEKAEVLEDEYQHLFLKPLLNASTLLITFQGEAEALTVSINEQGEMKKVSPPQTSNLTFYGNQTEIIDLLHGDISLQHLI
QSGSLKVKGSFRALLKLEAILWLTNGFFQRILKN
>Mature_114_residues
MEKAEVLEDEYQHLFLKPLLNASTLLITFQGEAEALTVSINEQGEMKKVSPPQTSNLTFYGNQTEIIDLLHGDISLQHLI
QSGSLKVKGSFRALLKLEAILWLTNGFFQRILKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUSD_BACSU (O32170)

Other databases:

- EMBL:   AL009126
- PIR:   E70020
- RefSeq:   NP_391155.1
- ProteinModelPortal:   O32170
- EnsemblBacteria:   EBBACT00000003234
- GeneID:   936713
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32760
- NMPDR:   fig|224308.1.peg.3281
- GenoList:   BSU32760
- GeneTree:   EBGT00050000002187
- HOGENOM:   HBG338296
- OMA:   KLEAILW
- ProtClustDB:   CLSK887842
- BioCyc:   BSUB:BSU32760-MONOMER
- InterPro:   IPR003033

Pfam domain/function: PF02036 SCP2

EC number: NA

Molecular weight: Translated: 12858; Mature: 12858

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAEVLEDEYQHLFLKPLLNASTLLITFQGEAEALTVSINEQGEMKKVSPPQTSNLTFY
CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCEECCCCCCCCCEEEE
GNQTEIIDLLHGDISLQHLIQSGSLKVKGSFRALLKLEAILWLTNGFFQRILKN
CCCCEEEEECCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKAEVLEDEYQHLFLKPLLNASTLLITFQGEAEALTVSINEQGEMKKVSPPQTSNLTFY
CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCEECCCCCCCCCEEEE
GNQTEIIDLLHGDISLQHLIQSGSLKVKGSFRALLKLEAILWLTNGFFQRILKN
CCCCEEEEECCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377