Click here to switch to the map view.

The map label for this gene is frlN

Identifier: 16080312

GI number: 16080312

Start: 3348825

End: 3349703

Strand: Reverse

Name: frlN

Synonym: BSU32590

Alternate gene names: 16080312

Gene position: 3349703-3348825 (Counterclockwise)

Preceding gene: 16080313

Following gene: 16080311

Centisome position: 79.46

GC content: 44.25

Gene sequence:

>879_bases
TTGGTCAATCAGAATAAAATAATCCCCTATTTGTTTTTGGTGCCCGCTCTCGTTTTTTTACTTTTCGTTTATATCCCGAT
TTTTGAGAATGTATTCCTCAGCCTGTTTCAGTGGAGCTCATTTTCTCCGGAAAAAACGTTTATCGGCTTAAAAAACTATG
TTGAATTATTTCATGATCCTGTCTTCTATCAGGCACTTACCAATAATGTGCTTTATGCAGTGATCTCAATTGTATGCCAG
GTATTTGGCGGTTTGATTTTGGCGGCGGTGCTTGAGGATAAGCTGGTCAGAAAATGGTCGCCGTTTTTTCGTACCGTTTT
CTTTTTGCCGGTTGTCATCTCAATGACGGTGATCGCGCTTTTGTTTGATTTTATTTACAATCCGGAGACAGGGCTTTTGA
ATCAGCTGCTTCAGGCCATCGGTCTTGATCAGCTGACGAGGGCCTGGCTCGGGGATGACAGCACAGCTATGCTTTCTGTC
ATTTTTGTGTCCCAGTGGCAATCTGTCGGTTATATTGCGATGCTGTACATCGTGTCGATTCAAAAAATACCGGATGAACT
GTATGAAGCGGCCCGGCTTGACGGCGCGGGTAAAATTCAGCAGTTTTTTCATATTACTGTTCCCCAGACGAAAGAGATGT
CTTTTGTTGCGGTGGTCATGACGCTGACCGGAGCCTTTACGGTCTTTAATGAGCCGTACATTTTGACAGGCGGCGGGCCG
GGAAAAGCGTCAGAAGTCTTGAGCACGTTTTTATATAAAAGCGCCTTTACAAAGGATATGATGGGCTACGCCTCAGCGAT
TGCCACTGTCGTGTTAATCATTACGCTTGCATTATCGCTCATGCAAATGAAGTTCTTTAAAACCGGAAAGGAGGAGTAA

Upstream 100 bases:

>100_bases
CGTTCAAAAGGCAGCAAAGCAGGTGAGGGCGTCAGCTGAATAAATCAAAGAAAAGGTGAAGCTTCGCACCTTTTCTTTTT
ATAAAGGAGATGAGATACCC

Downstream 100 bases:

>100_bases
CTGATGCTGCCTCAGAAGAAGACAGATTCGTTCAGATTGGAGCCGGTGCCTGACCAGCACATTGAGGTGAAAGATAAGCC
TAGACGAAAATGGTATATCG

Product: fructose-amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MVNQNKIIPYLFLVPALVFLLFVYIPIFENVFLSLFQWSSFSPEKTFIGLKNYVELFHDPVFYQALTNNVLYAVISIVCQ
VFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALLFDFIYNPETGLLNQLLQAIGLDQLTRAWLGDDSTAMLSV
IFVSQWQSVGYIAMLYIVSIQKIPDELYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTGGGP
GKASEVLSTFLYKSAFTKDMMGYASAIATVVLIITLALSLMQMKFFKTGKEE

Sequences:

>Translated_292_residues
MVNQNKIIPYLFLVPALVFLLFVYIPIFENVFLSLFQWSSFSPEKTFIGLKNYVELFHDPVFYQALTNNVLYAVISIVCQ
VFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALLFDFIYNPETGLLNQLLQAIGLDQLTRAWLGDDSTAMLSV
IFVSQWQSVGYIAMLYIVSIQKIPDELYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTGGGP
GKASEVLSTFLYKSAFTKDMMGYASAIATVVLIITLALSLMQMKFFKTGKEE
>Mature_292_residues
MVNQNKIIPYLFLVPALVFLLFVYIPIFENVFLSLFQWSSFSPEKTFIGLKNYVELFHDPVFYQALTNNVLYAVISIVCQ
VFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALLFDFIYNPETGLLNQLLQAIGLDQLTRAWLGDDSTAMLSV
IFVSQWQSVGYIAMLYIVSIQKIPDELYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTGGGP
GKASEVLSTFLYKSAFTKDMMGYASAIATVVLIITLALSLMQMKFFKTGKEE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=30.2405498281787, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787570, Length=243, Percent_Identity=27.1604938271605, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1790465, Length=251, Percent_Identity=28.2868525896414, Blast_Score=94, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YURN_BACSU (O32155)

Other databases:

- EMBL:   AL009126
- PIR:   E70018
- RefSeq:   NP_391139.1
- ProteinModelPortal:   O32155
- SMR:   O32155
- EnsemblBacteria:   EBBACT00000000952
- GeneID:   936689
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32590
- NMPDR:   fig|224308.1.peg.3265
- GenoList:   BSU32590
- GeneTree:   EBGT00050000000647
- HOGENOM:   HBG739365
- OMA:   NEPYILT
- PhylomeDB:   O32155
- ProtClustDB:   CLSK2752505
- BioCyc:   BSUB:BSU32590-MONOMER
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 32832; Mature: 32832

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x119b7c0c)-; HASH(0x123d3d34)-; HASH(0x123ec0fc)-; HASH(0x11ed95d0)-; HASH(0x11bc6284)-; HASH(0x121886e0)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377