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The map label for this gene is yuiF

Identifier: 16080257

GI number: 16080257

Start: 3294942

End: 3296270

Strand: Reverse

Name: yuiF

Synonym: BSU32040

Alternate gene names: 16080257

Gene position: 3296270-3294942 (Counterclockwise)

Preceding gene: 16080258

Following gene: 16080255

Centisome position: 78.19

GC content: 47.25

Gene sequence:

>1329_bases
ATGAATGCAGTCGTCATCGCAGTCCTGCTTATGCTTGTATTAAGCCTGCTGCGTGTCAATATTGTTATCGCATTAATTAT
AGGCGCCTTGGCCGGCGGGTTAACAGGCGGGCTCGGTCTTGGCGAAACGGTTAAAGCTTTCACAGACGGTCTCGGCGGAA
ATGCCACCGTTGCAGTTAGCTATGCCATGCTTGGCGCGTTTGCCGCCGCTTTGACGAAAACGGGTCTTCCGGACGCAATG
GTGGAAGCCTCCGTTAAATTAATCGGAAATAAAGAAGATTCTCGAAAAAAAGCACTGTCTAAGGTGCTGATTGTGCTGAT
TATTTTAATTGTATCTTGTTTTTCGCAAAACGTCGTTCCGGTTCACATCGCGTTTATCCCGGTGCTGATTCCGCCGCTTT
TGAAAATCTTTAATGAACTTGAAATGGACCGCCGTCTGATCGCGTGTGTAATTACATTTGGCTTAACGGCTCCTTATATT
TTGCTTCCGGTCGGTTTCGGCCAAATCTTCCAAGGCATGCTGAAGGACAATATGGCGGATGCCGGGTTAAACGTTCCGCT
TGCTGATATTCCGTACGCACTGATTATTCCAGTTGCAGGTATGGTTGTCGGCCTTATTTTATCAGTGATCGTATACCGTA
AACCGAAACAATATGAAACAAAAGACATTTCAGGTGCAGAAGCATCGCCATATACGAGAAAAAGTATTGGTATCGCGGTT
CTAGCCATTGTTGTGTCACTCGGCGTCCAGCTTTACTTATCTCAGACTTTGGGAGTAGAAGGAATGATTATGGGGGCGCT
CGCTGGTCTGATTGTTCTGTTTGTCAGCGGTGTGATGAAGCGTGATGAAGCGGACTCACTGATTACTGATGGAATGGTTT
TAATGGCCTTTATCGGCTTTGTCATGCTTGTTGCAGCCGGATTTTCAAACGTATTGACGAAAACCGGAGATGTCGAGTCA
CTGGTCAAAACGTCAGCTGGTTTTATCGGACACAGTCAGTCCTTGGGCGCATTGCTGATGCTCATTGTCGGCTTATTAAT
TACAATGGGGATCGGATCTTCTTTTGCGACCATTCCTGTTATCACAACCATTTTCGTGCCTCTATGCATGCAGCTTGGAT
TCAGCCCGATGGCAACGATTGCGATTATCGGGGCTGCTGCTGCGCTTGGCGATGCCGGTTCACCTGCCAGTGACAGTACG
CTTGGGCCGACTTCAGGTTTGAGTGCGGACGGCCAGCATCACCACATTTGGGATACTTGTGTGCCGACATTTATATTTTA
TAATATTCCGCTTGTCATCTTTGGCTGGATTGCAGCGCTTGTTTTATAG

Upstream 100 bases:

>100_bases
ATCTTTAGTTGACTAAAGTGGATCGGTTATGATACGATACGTTCGTACTTTATTTATCTACTACATTAGCAAACTAAAGG
ATTTTTGGAGGGGTATCATC

Downstream 100 bases:

>100_bases
GAAAAAGGCTCCCCTTTACTGGGGAGCCTTTTCTCGTTATGATAAAAAAACCGTCCAATAGAACGGTTTTTACGTAGATG
ATATGTGATTTCTGTTAAAG

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MNAVVIAVLLMLVLSLLRVNIVIALIIGALAGGLTGGLGLGETVKAFTDGLGGNATVAVSYAMLGAFAAALTKTGLPDAM
VEASVKLIGNKEDSRKKALSKVLIVLIILIVSCFSQNVVPVHIAFIPVLIPPLLKIFNELEMDRRLIACVITFGLTAPYI
LLPVGFGQIFQGMLKDNMADAGLNVPLADIPYALIIPVAGMVVGLILSVIVYRKPKQYETKDISGAEASPYTRKSIGIAV
LAIVVSLGVQLYLSQTLGVEGMIMGALAGLIVLFVSGVMKRDEADSLITDGMVLMAFIGFVMLVAAGFSNVLTKTGDVES
LVKTSAGFIGHSQSLGALLMLIVGLLITMGIGSSFATIPVITTIFVPLCMQLGFSPMATIAIIGAAAALGDAGSPASDST
LGPTSGLSADGQHHHIWDTCVPTFIFYNIPLVIFGWIAALVL

Sequences:

>Translated_442_residues
MNAVVIAVLLMLVLSLLRVNIVIALIIGALAGGLTGGLGLGETVKAFTDGLGGNATVAVSYAMLGAFAAALTKTGLPDAM
VEASVKLIGNKEDSRKKALSKVLIVLIILIVSCFSQNVVPVHIAFIPVLIPPLLKIFNELEMDRRLIACVITFGLTAPYI
LLPVGFGQIFQGMLKDNMADAGLNVPLADIPYALIIPVAGMVVGLILSVIVYRKPKQYETKDISGAEASPYTRKSIGIAV
LAIVVSLGVQLYLSQTLGVEGMIMGALAGLIVLFVSGVMKRDEADSLITDGMVLMAFIGFVMLVAAGFSNVLTKTGDVES
LVKTSAGFIGHSQSLGALLMLIVGLLITMGIGSSFATIPVITTIFVPLCMQLGFSPMATIAIIGAAAALGDAGSPASDST
LGPTSGLSADGQHHHIWDTCVPTFIFYNIPLVIFGWIAALVL
>Mature_442_residues
MNAVVIAVLLMLVLSLLRVNIVIALIIGALAGGLTGGLGLGETVKAFTDGLGGNATVAVSYAMLGAFAAALTKTGLPDAM
VEASVKLIGNKEDSRKKALSKVLIVLIILIVSCFSQNVVPVHIAFIPVLIPPLLKIFNELEMDRRLIACVITFGLTAPYI
LLPVGFGQIFQGMLKDNMADAGLNVPLADIPYALIIPVAGMVVGLILSVIVYRKPKQYETKDISGAEASPYTRKSIGIAV
LAIVVSLGVQLYLSQTLGVEGMIMGALAGLIVLFVSGVMKRDEADSLITDGMVLMAFIGFVMLVAAGFSNVLTKTGDVES
LVKTSAGFIGHSQSLGALLMLIVGLLITMGIGSSFATIPVITTIFVPLCMQLGFSPMATIAIIGAAAALGDAGSPASDST
LGPTSGLSADGQHHHIWDTCVPTFIFYNIPLVIFGWIAALVL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUIF_BACSU (O32105)

Other databases:

- EMBL:   AL009126
- PIR:   G70012
- RefSeq:   NP_391084.1
- ProteinModelPortal:   O32105
- EnsemblBacteria:   EBBACT00000000657
- GeneID:   937212
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32040
- NMPDR:   fig|224308.1.peg.3210
- GenoList:   BSU32040
- GeneTree:   EBGT00050000001370
- HOGENOM:   HBG289792
- OMA:   SLSRVHV
- ProtClustDB:   CLSK867424
- BioCyc:   BSUB:BSU32040-MONOMER
- InterPro:   IPR018461

Pfam domain/function: PF03553 Na_H_antiporter

EC number: NA

Molecular weight: Translated: 45938; Mature: 45938

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12479a44)-; HASH(0xe998a88)-; HASH(0x1140b67c)-; HASH(0x12309afc)-; HASH(0x1220496c)-; HASH(0x11d8b600)-; HASH(0x120ff5a8)-; HASH(0x1246ef3c)-; HASH(0x11e61bc0)-; HASH(0x1246ba0c)-; HASH(0x12305240)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVVIAVLLMLVLSLLRVNIVIALIIGALAGGLTGGLGLGETVKAFTDGLGGNATVAVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHH
YAMLGAFAAALTKTGLPDAMVEASVKLIGNKEDSRKKALSKVLIVLIILIVSCFSQNVVP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VHIAFIPVLIPPLLKIFNELEMDRRLIACVITFGLTAPYILLPVGFGQIFQGMLKDNMAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHC
AGLNVPLADIPYALIIPVAGMVVGLILSVIVYRKPKQYETKDISGAEASPYTRKSIGIAV
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LAIVVSLGVQLYLSQTLGVEGMIMGALAGLIVLFVSGVMKRDEADSLITDGMVLMAFIGF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VMLVAAGFSNVLTKTGDVESLVKTSAGFIGHSQSLGALLMLIVGLLITMGIGSSFATIPV
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ITTIFVPLCMQLGFSPMATIAIIGAAAALGDAGSPASDSTLGPTSGLSADGQHHHIWDTC
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
VPTFIFYNIPLVIFGWIAALVL
HHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MNAVVIAVLLMLVLSLLRVNIVIALIIGALAGGLTGGLGLGETVKAFTDGLGGNATVAVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHH
YAMLGAFAAALTKTGLPDAMVEASVKLIGNKEDSRKKALSKVLIVLIILIVSCFSQNVVP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VHIAFIPVLIPPLLKIFNELEMDRRLIACVITFGLTAPYILLPVGFGQIFQGMLKDNMAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHC
AGLNVPLADIPYALIIPVAGMVVGLILSVIVYRKPKQYETKDISGAEASPYTRKSIGIAV
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LAIVVSLGVQLYLSQTLGVEGMIMGALAGLIVLFVSGVMKRDEADSLITDGMVLMAFIGF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VMLVAAGFSNVLTKTGDVESLVKTSAGFIGHSQSLGALLMLIVGLLITMGIGSSFATIPV
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ITTIFVPLCMQLGFSPMATIAIIGAAAALGDAGSPASDSTLGPTSGLSADGQHHHIWDTC
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
VPTFIFYNIPLVIFGWIAALVL
HHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377