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The map label for this gene is yukC

Identifier: 16080240

GI number: 16080240

Start: 3274462

End: 3275817

Strand: Reverse

Name: yukC

Synonym: BSU31890

Alternate gene names: 16080240

Gene position: 3275817-3274462 (Counterclockwise)

Preceding gene: 16080241

Following gene: 255767727

Centisome position: 77.71

GC content: 40.93

Gene sequence:

>1356_bases
ATGTCAGGTGAACAAAAATCATATTTAGAAAACCAATTAGAAGCTGTTGCCGAGAAAACAGATGCCGGCTATACATTTAC
CTTTCAACGGGAAAAAATAAAGCTTCTCGACGGTCTTGAAGCTAACGTGATCAAAGATATAAATCCATTTTTTCATAAAG
AAATCGATGTGACGGATGATGAAGTAATCATCACAATCCAACCTCCCTCCTCCTATAAAGCATTCCGCTTCATGAAAGCT
AAGGATAAAAAAAGTAAATGGCAGTTTGCCTATCAGCTTGTTCAAGCCGTACAGCAGCACAATCTGTCGAGGCTGAATTT
GATTGTCGCTCCTGAAAACATTGTATTCGATAAAGGGCTTACGCCTTATTTTCTCCATTATGGAGTAAAAGAAAGCATTC
CTCCTTACGAGCGTGATGAGGAAAGAGTATGGCAGGAGCTGAAAGCGGCAGCGGCTTTGGCAGTTGACGGCGCTTTTGCG
TTTGAAGACTACCTGAAATTCAATGAAACGCTGACGTTCTCCGCAGAGGCAAAGGCGATATTAGATGCTGAATCCTATGA
TGATTTGCTCGAGCTGATTCAAACCCATATTGATGAGCTCGAAGCCAAAGCAAAAACATACATACATATCCCGAGAAAGA
AGTGGAACATCCAGCGATATATCGGCCTGGGGCTCATTGTTTTGCTTGTACCGGCACTTATTTATTCGATGTACGCCTTA
TTTTTCGCGCAGCCAAAGCACCAGGCGATAGTGGACAGCAACCGTGCGTTCTTAAACAAGCAGTACAGTGAAGTCATCAG
CACACTGTCCAAGTACGATGCGGAAAGCCTGCCTGAATCGGTGCAGTATCAGCTGGCGACGTCCTATGTTGAGGTCGAAA
ACCTGGGGAGTGCAAAAACCAAAAATATAGAAAATAATTTAGTCACCCTTCAATCAGACCCTCAGCATTTCTTATATTGG
ATTGATTATGGTCGAGGAGAATACAAAGAAGCGATCAGTATCGGCCGTAAGCTGGAATACAATGATTATATTTACTTTGC
CCTAGCTAAATATAAACAGCAGCTTTTATCTGAGGATACAAATGATGAAGACATACAAAAAGAACTTGATTCAGTAAATA
GTGAGCTTGAAAAAGCCCAAAAAGAACGTCAAGAAAATAAACAGTCTAATTCTGAAACATCGTTAGTCGATACAAGCGAA
GAACAGACACAAACAGACGAAGAAAAACAAGCAGAAGAGAAAGCGGCAGAAGAAAAAGCCGCAGCCGAGGAAAAAGCGAA
AAAAGAAGAACAGAAGGAAAAAGAAGACGAGAAAAAAGAAACAGAAAAGAAAGATGAGAAAAAAGATGACAAATAA

Upstream 100 bases:

>100_bases
TGGTGAACAAGGATAAGGTGTTTTCCGGAGAATGCAAGCTGTCTGATTGCGGCATTACAAACGGAGACCGGCTTGAAATA
TTATGAAAGGATCTGGTTGA

Downstream 100 bases:

>100_bases
CGTGAGACATGAAGCGCAGGTCATCGCATGCTGCCATTCGGCCGTAAGGGGGTTCGCCATTTGAGTCTATTATGGGTTTT
TTACCAAAATAACGTTCAAA

Product: membrane-associated enzyme involved in bacteriocin production

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MSGEQKSYLENQLEAVAEKTDAGYTFTFQREKIKLLDGLEANVIKDINPFFHKEIDVTDDEVIITIQPPSSYKAFRFMKA
KDKKSKWQFAYQLVQAVQQHNLSRLNLIVAPENIVFDKGLTPYFLHYGVKESIPPYERDEERVWQELKAAAALAVDGAFA
FEDYLKFNETLTFSAEAKAILDAESYDDLLELIQTHIDELEAKAKTYIHIPRKKWNIQRYIGLGLIVLLVPALIYSMYAL
FFAQPKHQAIVDSNRAFLNKQYSEVISTLSKYDAESLPESVQYQLATSYVEVENLGSAKTKNIENNLVTLQSDPQHFLYW
IDYGRGEYKEAISIGRKLEYNDYIYFALAKYKQQLLSEDTNDEDIQKELDSVNSELEKAQKERQENKQSNSETSLVDTSE
EQTQTDEEKQAEEKAAEEKAAAEEKAKKEEQKEKEDEKKETEKKDEKKDDK

Sequences:

>Translated_451_residues
MSGEQKSYLENQLEAVAEKTDAGYTFTFQREKIKLLDGLEANVIKDINPFFHKEIDVTDDEVIITIQPPSSYKAFRFMKA
KDKKSKWQFAYQLVQAVQQHNLSRLNLIVAPENIVFDKGLTPYFLHYGVKESIPPYERDEERVWQELKAAAALAVDGAFA
FEDYLKFNETLTFSAEAKAILDAESYDDLLELIQTHIDELEAKAKTYIHIPRKKWNIQRYIGLGLIVLLVPALIYSMYAL
FFAQPKHQAIVDSNRAFLNKQYSEVISTLSKYDAESLPESVQYQLATSYVEVENLGSAKTKNIENNLVTLQSDPQHFLYW
IDYGRGEYKEAISIGRKLEYNDYIYFALAKYKQQLLSEDTNDEDIQKELDSVNSELEKAQKERQENKQSNSETSLVDTSE
EQTQTDEEKQAEEKAAEEKAAAEEKAKKEEQKEKEDEKKETEKKDEKKDDK
>Mature_450_residues
SGEQKSYLENQLEAVAEKTDAGYTFTFQREKIKLLDGLEANVIKDINPFFHKEIDVTDDEVIITIQPPSSYKAFRFMKAK
DKKSKWQFAYQLVQAVQQHNLSRLNLIVAPENIVFDKGLTPYFLHYGVKESIPPYERDEERVWQELKAAAALAVDGAFAF
EDYLKFNETLTFSAEAKAILDAESYDDLLELIQTHIDELEAKAKTYIHIPRKKWNIQRYIGLGLIVLLVPALIYSMYALF
FAQPKHQAIVDSNRAFLNKQYSEVISTLSKYDAESLPESVQYQLATSYVEVENLGSAKTKNIENNLVTLQSDPQHFLYWI
DYGRGEYKEAISIGRKLEYNDYIYFALAKYKQQLLSEDTNDEDIQKELDSVNSELEKAQKERQENKQSNSETSLVDTSEE
QTQTDEEKQAEEKAAEEKAAAEEKAKKEEQKEKEDEKKETEKKDEKKDDK

Specific function: Unknown

COG id: COG4499

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the essB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUKC_BACSU (P71070)

Other databases:

- EMBL:   Z82015
- EMBL:   AL009126
- PIR:   E70013
- RefSeq:   NP_391067.1
- ProteinModelPortal:   P71070
- EnsemblBacteria:   EBBACT00000000775
- GeneID:   936572
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31890
- NMPDR:   fig|224308.1.peg.3192
- GenoList:   BSU31890
- GeneTree:   EBGT00050000002992
- HOGENOM:   HBG338271
- OMA:   IHRGIRD
- ProtClustDB:   CLSK872888
- BioCyc:   BSUB:BSU31890-MONOMER
- InterPro:   IPR018778

Pfam domain/function: PF10140 essB

EC number: NA

Molecular weight: Translated: 52162; Mature: 52031

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11d822bc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEQKSYLENQLEAVAEKTDAGYTFTFQREKIKLLDGLEANVIKDINPFFHKEIDVTDD
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHCCHHHHCCCCCCCC
EVIITIQPPSSYKAFRFMKAKDKKSKWQFAYQLVQAVQQHNLSRLNLIVAPENIVFDKGL
CEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCC
TPYFLHYGVKESIPPYERDEERVWQELKAAAALAVDGAFAFEDYLKFNETLTFSAEAKAI
CHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCHHH
LDAESYDDLLELIQTHIDELEAKAKTYIHIPRKKWNIQRYIGLGLIVLLVPALIYSMYAL
HCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FFAQPKHQAIVDSNRAFLNKQYSEVISTLSKYDAESLPESVQYQLATSYVEVENLGSAKT
HHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHHCCCCCC
KNIENNLVTLQSDPQHFLYWIDYGRGEYKEAISIGRKLEYNDYIYFALAKYKQQLLSEDT
CCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCC
NDEDIQKELDSVNSELEKAQKERQENKQSNSETSLVDTSEEQTQTDEEKQAEEKAAEEKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHCCHHHHHHHHHHHHHHH
AAEEKAKKEEQKEKEDEKKETEKKDEKKDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure 
SGEQKSYLENQLEAVAEKTDAGYTFTFQREKIKLLDGLEANVIKDINPFFHKEIDVTDD
CCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHCCHHHHCCCCCCCC
EVIITIQPPSSYKAFRFMKAKDKKSKWQFAYQLVQAVQQHNLSRLNLIVAPENIVFDKGL
CEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCC
TPYFLHYGVKESIPPYERDEERVWQELKAAAALAVDGAFAFEDYLKFNETLTFSAEAKAI
CHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCHHH
LDAESYDDLLELIQTHIDELEAKAKTYIHIPRKKWNIQRYIGLGLIVLLVPALIYSMYAL
HCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FFAQPKHQAIVDSNRAFLNKQYSEVISTLSKYDAESLPESVQYQLATSYVEVENLGSAKT
HHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHHCCCCCC
KNIENNLVTLQSDPQHFLYWIDYGRGEYKEAISIGRKLEYNDYIYFALAKYKQQLLSEDT
CCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCC
NDEDIQKELDSVNSELEKAQKERQENKQSNSETSLVDTSEEQTQTDEEKQAEEKAAEEKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHCCHHHHHHHHHHHHHHH
AAEEKAKKEEQKEKEDEKKETEKKDEKKDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9168598; 9384377